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Volumn 6, Issue 3, 2008, Pages 0483-0489

Density-dependent cladogenesis in birds

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BIRD; CLADISTICS; CLADOGENESIS; EVOLUTION; EVOLUTIONARY ADAPTATION; GEOGRAPHIC DISTRIBUTION; NONHUMAN; PHYLOGENY; POPULATION DENSITY DEPENDENCE; REINFORCEMENT; SIMULATION; SPECIES DIFFERENTIATION; STOCHASTIC MODEL; AGING; ANIMAL; CLASSIFICATION; COMPUTER SIMULATION; GENETICS; PHYSIOLOGY; POPULATION DENSITY; REGRESSION ANALYSIS;

EID: 41749120055     PISSN: 15449173     EISSN: 15457885     Source Type: Journal    
DOI: 10.1371/journal.pbio.0060071     Document Type: Article
Times cited : (343)

References (53)
  • 3
    • 29144433414 scopus 로고    scopus 로고
    • Dynamic patterns of adaptive radiation
    • Gavrilets S, Vose A (2005) Dynamic patterns of adaptive radiation. Proc Natl Acad Sci U S A 102: 18040-18045.
    • (2005) Proc Natl Acad Sci U S A , vol.102 , pp. 18040-18045
    • Gavrilets, S.1    Vose, A.2
  • 4
    • 0000900674 scopus 로고
    • Ecological factors in speciation
    • Mayr E (1947) Ecological factors in speciation. Evolution 1: 263-288.
    • (1947) Evolution , vol.1 , pp. 263-288
    • Mayr, E.1
  • 5
    • 0002880190 scopus 로고    scopus 로고
    • Ecological causes of speciation
    • Howard DJ, Berlocher SH, editors, Oxford: Oxford University Press. pp
    • Schluter D (1998) Ecological causes of speciation. In: Howard DJ, Berlocher SH, editors. Endless forms: species and speciation. Oxford: Oxford University Press. pp. 114-129.
    • (1998) Endless forms: Species and speciation , pp. 114-129
    • Schluter, D.1
  • 6
    • 0027329742 scopus 로고
    • Laboratory studies on speciation: What have we learned in 40 years
    • Rice W, Hostert EE (1993) Laboratory studies on speciation: What have we learned in 40 years. Evolution 47: 1637-1653.
    • (1993) Evolution , vol.47 , pp. 1637-1653
    • Rice, W.1    Hostert, E.E.2
  • 7
    • 0035400780 scopus 로고    scopus 로고
    • Ecology and the origin of species
    • Schluter D (2001) Ecology and the origin of species. Trends Ecol Evol 16: 372-380.
    • (2001) Trends Ecol Evol , vol.16 , pp. 372-380
    • Schluter, D.1
  • 8
    • 0031450565 scopus 로고    scopus 로고
    • The evolution of morphological diversity
    • Foote M (1997) The evolution of morphological diversity. Annu Rev Ecol Syst 28: 129-152.
    • (1997) Annu Rev Ecol Syst , vol.28 , pp. 129-152
    • Foote, M.1
  • 9
    • 0032574316 scopus 로고    scopus 로고
    • Sepkoski JJ (1998) Rates of speciation in the fossil record. Philos Trans R Soc B: Biol Sci 353: 315-326.
    • Sepkoski JJ (1998) Rates of speciation in the fossil record. Philos Trans R Soc B: Biol Sci 353: 315-326.
  • 10
    • 0028561478 scopus 로고
    • Phylogenies without fossils
    • Harvey PH, May RM, Nee S (1994) Phylogenies without fossils. Evolution 48: 523-529.
    • (1994) Evolution , vol.48 , pp. 523-529
    • Harvey, P.H.1    May, R.M.2    Nee, S.3
  • 11
    • 0026756206 scopus 로고
    • Tempo and mode of evolution revealed from molecular phylogenies
    • Nee S, Mooers AO, Harvey PH (1992) Tempo and mode of evolution revealed from molecular phylogenies. Proc Natl Acad Sci U S A 89: 8322-8326.
    • (1992) Proc Natl Acad Sci U S A , vol.89 , pp. 8322-8326
    • Nee, S.1    Mooers, A.O.2    Harvey, P.H.3
  • 12
    • 0034703844 scopus 로고    scopus 로고
    • Testing macro-evolutionary models using incomplete molecular phylogenies
    • Pybus OG, Harvey PH (2000) Testing macro-evolutionary models using incomplete molecular phylogenies. Proc R Soc Lond B 267: 2267-2272.
    • (2000) Proc R Soc Lond B , vol.267 , pp. 2267-2272
    • Pybus, O.G.1    Harvey, P.H.2
  • 14
    • 0029032827 scopus 로고
    • Evidence from molecular systematics for decreased avian diversification in the Pleistocene epoch
    • Zink RM, Slowinski JB (1995) Evidence from molecular systematics for decreased avian diversification in the Pleistocene epoch. Proc Natl Acad Sci U S A 92: 5832-5835.
    • (1995) Proc Natl Acad Sci U S A , vol.92 , pp. 5832-5835
    • Zink, R.M.1    Slowinski, J.B.2
  • 15
    • 0033595328 scopus 로고    scopus 로고
    • Explosive speciation in the New World Dendroica warblers
    • Lovette IJ, Bermingham E (1999) Explosive speciation in the New World Dendroica warblers. Proc R Soc Lond B 266: 1629-1636.
    • (1999) Proc R Soc Lond B , vol.266 , pp. 1629-1636
    • Lovette, I.J.1    Bermingham, E.2
  • 16
    • 0033794905 scopus 로고    scopus 로고
    • The imprint of history on communities of North American and Asian warblers
    • Price T, Lovette IJ, Bermingham E, Gibbs HL, Richman AD (2000) The imprint of history on communities of North American and Asian warblers. Am Nat 156: 354-367.
    • (2000) Am Nat , vol.156 , pp. 354-367
    • Price, T.1    Lovette, I.J.2    Bermingham, E.3    Gibbs, H.L.4    Richman, A.D.5
  • 17
    • 0043023771 scopus 로고    scopus 로고
    • Tempo and mode of evolutionary radiation in iguanian lizards
    • Harmon LJ, Schulte IIJA, Larson A, Losos JB (2003) Tempo and mode of evolutionary radiation in iguanian lizards. Science 301: 961-964.
    • (2003) Science , vol.301 , pp. 961-964
    • Harmon, L.J.1    IIJA, S.2    Larson, A.3    Losos, J.B.4
  • 18
    • 33745230793 scopus 로고    scopus 로고
    • Divergent timing and patterns of species accumulation in lowland and highland neotropical birds
    • Weir JT (2006) Divergent timing and patterns of species accumulation in lowland and highland neotropical birds. Evolution 60: 842-855.
    • (2006) Evolution , vol.60 , pp. 842-855
    • Weir, J.T.1
  • 19
    • 34047213895 scopus 로고    scopus 로고
    • Greenwood Village Colorado, Roberts & Company Publishers
    • Price TD (2008) Speciation in birds. Greenwood Village (Colorado): Roberts & Company Publishers.
    • (2008) Speciation in birds
    • Price, T.D.1
  • 20
    • 33645758766 scopus 로고    scopus 로고
    • Rapid lineage accumulation in a non-adaptive radiation: Phylogenetic analysis of diversification rates in eastern North American woodland salamanders (Plethodontidae: Plethodon)
    • Kozak KH, Weisrock DW, Larson A (2006) Rapid lineage accumulation in a non-adaptive radiation: phylogenetic analysis of diversification rates in eastern North American woodland salamanders (Plethodontidae: Plethodon). Proc R Soc Lond B 273: 539-546.
    • (2006) Proc R Soc Lond B , vol.273 , pp. 539-546
    • Kozak, K.H.1    Weisrock, D.W.2    Larson, A.3
  • 21
    • 33746629445 scopus 로고    scopus 로고
    • Tropical forests are both evolutionary cradles and museums of leaf beetle diversity
    • McKenna DD, Farrell BD (2006) Tropical forests are both evolutionary cradles and museums of leaf beetle diversity. Proc Natl Acad Sci U S A 103: 10947-10951.
    • (2006) Proc Natl Acad Sci U S A , vol.103 , pp. 10947-10951
    • McKenna, D.D.1    Farrell, B.D.2
  • 22
    • 19544378297 scopus 로고    scopus 로고
    • Rapid cladogensis in marine fishes revisited
    • Rüber L, Zardoya R (2005) Rapid cladogensis in marine fishes revisited. Evolution 59: 1119-1127.
    • (2005) Evolution , vol.59 , pp. 1119-1127
    • Rüber, L.1    Zardoya, R.2
  • 23
    • 0242552327 scopus 로고    scopus 로고
    • Global diversification rates of passerine birds
    • Ricklefs RE (2003) Global diversification rates of passerine birds. Proc R Soc Lond B 270: 2285-2291.
    • (2003) Proc R Soc Lond B , vol.270 , pp. 2285-2291
    • Ricklefs, R.E.1
  • 24
    • 33749842788 scopus 로고    scopus 로고
    • Global variation in the diversification rate of passerine birds
    • Ricklefs RE (2006) Global variation in the diversification rate of passerine birds. Ecology 87: 2468-2478.
    • (2006) Ecology , vol.87 , pp. 2468-2478
    • Ricklefs, R.E.1
  • 25
    • 34547683481 scopus 로고    scopus 로고
    • History and diversity: Explorations at the intersection of ecology and evolution
    • Ricklefs RE (2007) History and diversity: explorations at the intersection of ecology and evolution. Am Nat 170: s56-70.
    • (2007) Am Nat , vol.170
    • Ricklefs, R.E.1
  • 26
    • 0000509127 scopus 로고
    • Stochastic models of phylogeny and the evolution of diversity
    • Raup DM, Gould SJ, Schopf TJM, Simberloff DS (1973) Stochastic models of phylogeny and the evolution of diversity. J Geol 81: 525-542.
    • (1973) J Geol , vol.81 , pp. 525-542
    • Raup, D.M.1    Gould, S.J.2    Schopf, T.J.M.3    Simberloff, D.S.4
  • 27
    • 33750245951 scopus 로고    scopus 로고
    • Which random processes describe the tree of life? A large-scale study of phylogenetic tree imbalance
    • Blum MGB, François O (2006) Which random processes describe the tree of life? A large-scale study of phylogenetic tree imbalance. Syst Biol 55: 685-691.
    • (2006) Syst Biol , vol.55 , pp. 685-691
    • Blum, M.G.B.1    François, O.2
  • 28
    • 0000678416 scopus 로고    scopus 로고
    • editors. Random discrete structures. IMA in Mathematics and its Applications. Berlin Germany, Springer. pp
    • Aldous DJ (1996) Probability distributions on cladograms. In: Aldous DJ, Permantle R, editors. Random discrete structures. IMA Volumes in Mathematics and its Applications. Berlin (Germany): Springer. pp. 1-18.
    • (1996) Probability distributions on cladograms , pp. 1-18
    • Aldous, D.J.1
  • 29
    • 33644820816 scopus 로고    scopus 로고
    • Underparamterized model of sequence evolution leads to bias in the estimation of diversification rates from molecular phylogenies
    • Revell LJ, Harmon LJ, Glor RE (2005) Underparamterized model of sequence evolution leads to bias in the estimation of diversification rates from molecular phylogenies. Syst Biol 54: 973-983.
    • (2005) Syst Biol , vol.54 , pp. 973-983
    • Revell, L.J.1    Harmon, L.J.2    Glor, R.E.3
  • 30
    • 0034496840 scopus 로고    scopus 로고
    • Perspective: Gene divergence, population divergence, and the variance in coalescence time in phylogeographic studies
    • Edwards SV, Beerli P (2000) Perspective: Gene divergence, population divergence, and the variance in coalescence time in phylogeographic studies. Evolution 54: 1839-1854.
    • (2000) Evolution , vol.54 , pp. 1839-1854
    • Edwards, S.V.1    Beerli, P.2
  • 31
    • 36249028141 scopus 로고    scopus 로고
    • Estimating diversification rates from phylogenetic information
    • Ricklefs RE (2007) Estimating diversification rates from phylogenetic information. Trends Ecol Evol 22: 601-610.
    • (2007) Trends Ecol Evol , vol.22 , pp. 601-610
    • Ricklefs, R.E.1
  • 32
    • 33845380445 scopus 로고    scopus 로고
    • Birth-death models in macroevolution
    • Nee S (2006) Birth-death models in macroevolution. Ann Rev Ecol Evol Syst 37: 1-17.
    • (2006) Ann Rev Ecol Evol Syst , vol.37 , pp. 1-17
    • Nee, S.1
  • 33
    • 33947137800 scopus 로고    scopus 로고
    • Correlated evolution of ecological differences among the Old World leaf warblers in the breeding and non-breeding seasons
    • Greenberg R, Marra PP, editors, Baltimore: John Hopkins University Press. pp
    • Price T, Gross S (2005) Correlated evolution of ecological differences among the Old World leaf warblers in the breeding and non-breeding seasons. In: Greenberg R, Marra PP, editors. Birds of two worlds: The ecology and evolution of migration. Baltimore: John Hopkins University Press. pp. 359-372.
    • (2005) Birds of two worlds: The ecology and evolution of migration , pp. 359-372
    • Price, T.1    Gross, S.2
  • 34
    • 1242321527 scopus 로고    scopus 로고
    • The tempo of avian diversification during the Quaternary
    • Zink RM, Klicka J, Barber BR (2004) The tempo of avian diversification during the Quaternary. Philos Trans R Soc B 359: 215-220.
    • (2004) Philos Trans R Soc B , vol.359 , pp. 215-220
    • Zink, R.M.1    Klicka, J.2    Barber, B.R.3
  • 35
    • 0017577868 scopus 로고
    • Probabilistic models in evolutionary paleobiology
    • Raup DM (1977) Probabilistic models in evolutionary paleobiology. Am Sci 65: 50-57.
    • (1977) Am Sci , vol.65 , pp. 50-57
    • Raup, D.M.1
  • 36
    • 33947248885 scopus 로고    scopus 로고
    • The latitudinal gradient in recent speciation and extinction rates of birds and mammals
    • Weir JT, Schluter D (2007) The latitudinal gradient in recent speciation and extinction rates of birds and mammals. Science 315: 1574-1576.
    • (2007) Science , vol.315 , pp. 1574-1576
    • Weir, J.T.1    Schluter, D.2
  • 37
    • 0002622031 scopus 로고
    • Extinctions in the fossil record
    • Lawton JH, May RM, editors, New York: Oxford University Press. pp
    • Jablonski D (1995) Extinctions in the fossil record. In: Lawton JH, May RM, editors. Extinction rates. New York: Oxford University Press. pp. 25-44.
    • (1995) Extinction rates , pp. 25-44
    • Jablonski, D.1
  • 38
    • 35748932852 scopus 로고    scopus 로고
    • R Development Core Team (, Vienna Austria, R Foundation for Statistical Computing
    • R Development Core Team (2007) R: A language and environment for statistical computing. Vienna (Austria): R Foundation for Statistical Computing.
    • (2007) R: A language and environment for statistical computing
  • 39
    • 41749096739 scopus 로고    scopus 로고
    • Drummond AJ, Kearse M, Heled J, Moir R (2006) Geneious v1.0. Available: http://www.geneious.com/. Accessed 24 February 2008.
    • Drummond AJ, Kearse M, Heled J, Moir R (2006) Geneious v1.0. Available: http://www.geneious.com/. Accessed 24 February 2008.
  • 40
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22: 4673-4680.
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 41
    • 3242810318 scopus 로고    scopus 로고
    • MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment
    • Kumar S, Tamura K, Nei M (2004) MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment. Briefings Bioinformat 5: 150-163.
    • (2004) Briefings Bioinformat , vol.5 , pp. 150-163
    • Kumar, S.1    Tamura, K.2    Nei, M.3
  • 42
    • 33344465800 scopus 로고    scopus 로고
    • Relaxed phylogenetics and dating with confidence
    • doi:10.1371/journal.pbio.0040088
    • Drummond AJ, Ho SYW, Phillips MJ, Rambaut A (2006) Relaxed phylogenetics and dating with confidence. PLoS Biol 4: e88. doi:10.1371/journal.pbio.0040088
    • (2006) PLoS Biol , vol.4
    • Drummond, A.J.1    Ho, S.Y.W.2    Phillips, M.J.3    Rambaut, A.4
  • 43
    • 38649110663 scopus 로고    scopus 로고
    • BEAST: Bayesian evolutionary analysis by sampling trees
    • Drummond AJ, Rambaut A (2007) BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evol Biol 7: 214.
    • (2007) BMC Evol Biol , vol.7 , pp. 214
    • Drummond, A.J.1    Rambaut, A.2
  • 44
    • 41749117872 scopus 로고    scopus 로고
    • Rambaut A, Drummond AJ (2003) Tracer v1.3. Available: http://evolve.zoo.ox.ac.uk/. Accessed 24 February 2008.
    • Rambaut A, Drummond AJ (2003) Tracer v1.3. Available: http://evolve.zoo.ox.ac.uk/. Accessed 24 February 2008.
  • 45
    • 0032557042 scopus 로고    scopus 로고
    • Pleistocene phylogeographic effects on avian populations and the speciation process
    • Avise DW J. C. (1998) Pleistocene phylogeographic effects on avian populations and the speciation process. Proc R Soc B: Biol Sci 265: 457-463.
    • (1998) Proc R Soc B: Biol Sci , vol.265 , pp. 457-463
    • Avise, D.J.C.1
  • 46
    • 34547100328 scopus 로고    scopus 로고
    • New taxonomy and the origin of species
    • doi:10.1371/journal.pbio.0050194
    • Meiri S, Mace GM (2007) New taxonomy and the origin of species. PLoS Biol 5: e194. doi:10.1371/journal.pbio.0050194
    • (2007) PLoS Biol , vol.5
    • Meiri, S.1    Mace, G.M.2
  • 47
    • 4344679902 scopus 로고    scopus 로고
    • Taxonomic inflation: Its influence on macroecology and conservation
    • Isaac NJB, Mallet J, Mace GM (2004) Taxonomic inflation: its influence on macroecology and conservation. Trends Ecol Evol 19: 464-469.
    • (2004) Trends Ecol Evol , vol.19 , pp. 464-469
    • Isaac, N.J.B.1    Mallet, J.2    Mace, G.M.3
  • 48
    • 33748559495 scopus 로고    scopus 로고
    • Likelihood methods for detecting temporal shifts in diversification rates
    • Rabosky DL (2006) Likelihood methods for detecting temporal shifts in diversification rates. Evolution 60: 1152-1164.
    • (2006) Evolution , vol.60 , pp. 1152-1164
    • Rabosky, D.L.1
  • 49
    • 85129154611 scopus 로고    scopus 로고
    • LASER: A maximum likelihood toolkit for detecting temporal shifts in diversification rates from molecular phylogenies
    • Rabosky DL (2006) LASER: A maximum likelihood toolkit for detecting temporal shifts in diversification rates from molecular phylogenies. Evol Bioinform Online: 257-260.
    • (2006) Evol Bioinform Online , pp. 257-260
    • Rabosky, D.L.1
  • 50
    • 38849105978 scopus 로고    scopus 로고
    • Available:, Accessed 24 February 2008
    • Rambaut A (2002) PhyloGen. Available: http://evolve.zoo.ox.ac.uk/. Accessed 24 February 2008.
    • (2002) PhyloGen
    • Rambaut, A.1
  • 51
    • 0002168111 scopus 로고
    • Review of phylogenetics: The theory and practise of phylogenetic systematics
    • Colless DH (1982) Review of phylogenetics: the theory and practise of phylogenetic systematics. Syst Zool 31: 100-104.
    • (1982) Syst Zool , vol.31 , pp. 100-104
    • Colless, D.H.1
  • 52
    • 32144453296 scopus 로고    scopus 로고
    • apTreeshape: Statistical analysis of phylogenetic tree shape
    • Bortolussi N, Durand E, Blum M, François O (2006) apTreeshape: statistical analysis of phylogenetic tree shape. Bioinformatics 22: 363-364.
    • (2006) Bioinformatics , vol.22 , pp. 363-364
    • Bortolussi, N.1    Durand, E.2    Blum, M.3    François, O.4


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