Molecular diversity of the aminoterminal region of the G protein gene of human respiratory syncytial virus subgroup B

Pathologie Biologie

Volumn 56, Issue 2, 2008, Pages 50-57

  Fodha, I ^a   Vabret, A ^b   Bouslama, L ^c   Leroux, M ^b   Legrand, L ^b   Dina, J ^b   Gouarin, S ^b   Petitjean, J ^b   Dewar, J ^d   Trabelsi, A ^a   Boujaafar, N ^a   Freymuth, F ^b  

^a SAHLOUL UNIVERSITY HOSPITAL   (Tunisia)

^b CAEN UNIVERSITY HOSPITAL   (France)

^c UNIVERSITY OF MONASTIR   (Tunisia)

^d SOUTH AFRICAN MEDICAL RESEARCH COUNCIL   (South Africa)

Author keywords

Glycoprotein G; N terminal; Respiratory syncytial virus; Sequence

Indexed keywords

AMINO ACID; GUANINE NUCLEOTIDE BINDING PROTEIN;

AMINO TERMINAL SEQUENCE; ARTICLE; BELGIUM; CANADA; GENETIC VARIABILITY; GENOTYPE; GEOGRAPHY; HUMAN; KENYA; NUCLEOTIDE SEQUENCE; QATAR; RESPIRATORY SYNCYTIAL PNEUMOVIRUS; SOUTH KOREA; TUNISIA; UNITED KINGDOM; VIRUS ISOLATION; VIRUS STRAIN;

AMINO ACID SEQUENCE; CHILD, PRESCHOOL; CONSERVED SEQUENCE; GENE AMPLIFICATION; GENE PRODUCTS, GAG; HUMANS; INFANT; MOLECULAR SEQUENCE DATA; PHYLOGENY; RESPIRATORY SYNCYTIAL VIRUS, HUMAN; RNA, VIRAL; SEQUENCE HOMOLOGY, AMINO ACID; VARIATION (GENETICS); VIRAL PROTEINS;

EID: 41649115688     PISSN: 03698114     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.patbio.2007.06.001     Document Type: Article

References (48)

1. Nagai K., Kamasaki H., Kuroiwa Y., Okita L., and Tsutsumi H. Nosocomial outbreak of respiratory syncytial virus subgroup B variants with the 60 nucleotides-duplicated G protein gene. J. Med. Virol. 74 (2004) 161-165
2. Arbiza J., Berois M., Delfraro A., Frabasile S., Mitoma F.D., Milk R., et al. Genetic characterization of respiratory infections in an HIV infected child. J. Clin. Virol. 35 (2006) 41-45
3. Johnson P.R., Spriggs M.K., Olmsted R.A., and Collins P.L. The G glycoprotein of human respiratory syncytial viruses of subgroups A and B: extensive sequence divergence between antigenically related proteins. Proc. Natl. Acad. Sci. USA 84 (1987) 5625-5629
4. Galiano M.C., Palomo C., Videla C.M., Arbiza J., Melero J.A., and Carballal G. Genetic and antigenic variability of human respiratory syncytial virus (groups A and b) isolated over seven consecutive seasons in Argentina (1995 to 2001). J. Clin. Microbiol. 43 (2005) 2266-2273
5. Collins P.L., Chanock R.M., and Murphy B.R. Respiratory syncytial virus. In: Knipe D.M., Howley P.M., Griffin D.E., Lamb R.A., Martin M.A., Roizman B., and Straus S.E. (Eds). Fields virology, 4th ed (2001), Lippincott Williams and Wilkins, Philadelphia, Pa 1443-1485
6. Levine S., Klaiber-Franco R., and Paradiso P.R. Demonstration that glycoprotein G is the attachment protein of respiratory syncytial virus. J. Gen. Virol. 68 (1987) 2521-2524
7. Walsh E.E., and Hruska J. Monoclonal antibodies to respiratory syncytial virus proteins: identification of the fusion protein. Proc. Natl. Acad. Sci. USA 82 (1983) 4075-4079
8. Coates H.V., Alling D.W., and Chanock R.M. An antigenic analysis of respiratory syncytial virus isolates by a plaque reduction neutralization assay. Am. J. Epidemiol. 83 (1966) 299-313
9. Anderson L.J., Hierholzer J.C., Tsou C., Hendry R.M., Fernie B.F., Stone Y., et al. Antigenic characterization of respiratory syncytial virus strains with monoclonal antibodies. J. Infect. Dis. 151 (1985) 626-633
10. Mufson M.A., Orvell C., Rafnar B., and Norrby E. Two distinct subtypes of human respiratory syncytial virus. J. Gen. Virol. 66 (1985) 2111-2124
11. Cristina J., Lopez J.A., Albo C., Garcia-Barreno B., Garcia J., Melero J.A., et al. Analysis of genetic variability in human respiratory syncytial virus by the RNase A mismatch cleavage method: subtype divergence and heterogeneity. Virology 174 (1990) 126-134
12. Melero J.A., Garcia-Barreno B., Martinez I., Pringle C.R., and Cane P.A. Antigenic structure, evolution and immunobiology of human respiratory syncytial virus attachment (G) protein. J. Gen. Virol. 78 (1997) 2411-2418
13. Trento A., Viegas M., Galiano M., Videla C., Carballal G., Mistchenko A.S., et al. Natural history of human respiratory syncytial virus inferred from phylogenetic analysis of the attachment (G) glycoprotein with a 60-nucleotide duplication. J. Virol. 80 (2006) 975-984
14. Wertz G.W., Collins P.L., Huang Y., Gruber C., Levine S., and Ball L.A. Nucleotide sequence of the G protein gene of human respiratory syncytial virus reveals an unusual type of viral membrane protein. Proc. Natl. Acad. Sci. USA 82 (1985) 4075-4079
15. Wertz G.W., Krieger M., and Ball L.A. Structure and cell surface maturation of the attachment glycoprotein of human respiratory syncytial virus in a cell line deficient in O glycosylation. J. Virol. 63 (1989) 4767-4776
16. Cane P.A., and Pringle C.R. Respiratory syncytial virus heterogeneity during an epidemic: analysis by limited nucleotide sequencing (SH gene) and restriction mapping (N gene). J. Gen. Virol. 72 (1991) 349-357
17. Sullender W.M., Mufson M.A., Anderson L.J., and Wertz G.W. Genetic diversity of the attachment protein of subgroup B respiratory syncytial viruses. J. Virol. 65 (1991) 5425-5434
18. Zlateva K.T., Lemey P., Moes E., Vandamme A.M., and Van Ranst M. Genetic variability and molecular evolution of the human respiratory syncytial virus subgroup B attachment G protein. J. Virol. 79 (2005) 9157-9167
19. Peret T.C., Hall C.B., Schnabel K.C., Golub J.A., and Anderson L.J. Circulation patterns of genetically distinct group A and B strains of human respiratory syncytial virus in a community. J. Gen. Virol. 79 (1998) 2221-2229
20. Venter M., Madhi S.A., Tiemessen C.T., and Schoub B.D. Genetic diversity and molecular epidemiology of respiratory syncytial virus over four consecutive seasons in South Africa: identification of new subgroup A and B genotypes. J. Gen. Virol. 82 (2001) 2117-2124
21. Martinez I., Valdes O., Delfraro A., Arbiza J., Russi J., and Melero J.A. Evolutionary pattern of the G glycoprotein of human respiratory syncytial viruses from antigenic group B: the use of alternative termination codons and lineage diversification. J. Gen. Virol. 80 (1999) 125-130
22. Rafiefard F., Johansson B., Tecle T., and Orven C. Molecular epidemiology of respiratory syncytial virus of group A in Stockholm, Sweden, between 1965 and 2003. Virus Res. 105 (2004) 137-145
23. Rafiefard F., Johansson B., Tecle T., and Orven C. Corrigendum for "Molecular epidemiology of respiratory syncytial virus of group A in Stockholm, Sweden, between 1965 and 2003". Virus Res. 107 (2005) 111-112
24. Fodha I., Vabret A., Trabelsi A., and Freymuth F. Epidemiological and antigenic analysis of respiratory syncytial virus in hospitalized Tunisian children, from 2000 to 2002. J. Med. Virol. 72 (2004) 683-687
25. Zambon M.C., Stockton J.D., Clewley J.P., and Fleming D.M. Contribution of influenza and respiratory syncytial virus to community cases of influenza-like illness: an observational study. Lancet 358 (2001) 1410-1416
26. Thompson J.D., Gibson T.J., Plewniak F., Jeanmougin F., and Higgins D.J. The CLUSTAL_X Windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 25 (1997) 4876-4878
27. Karron R.A., Buonagurio D.A., Georgiu A.F., Whitehead S.S., Adamus J.E., Clements-Mann M.L., et al. Respiratory syncytial virus (RSV) SH and G proteins are not essential for viral replication in vitro: clinical evaluation and molecular characterization of a cold-passage, attenuated RSV subgroup B mutant. Proc. Natl. Acad. Sci. USA 94 (1997) 13961-13966
28. Kumar S., Tamura K., and Nei M. MEGA3: integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment. Brief. Bioinform. 5 (2004) 150-163
29. Choi E.H., and Lee H.J. Genetic diversity and molecular epidemiology of the G protein of subgroups A and B of respiratory syncytial viruses isolated over 9 consecutive epidemics in Korea. J. Infect. Dis. 181 (2000) 1547-1556
30. Scott P.D., Ochola R., Ngama M., Okiro E.A., Nokes D.J., Medley G.F., et al. Molecular epidemiology of respiratory syncytial virus in Kilifi district, Kenya. J. Med. Virol. 74 (2004) 344-354
31. Peret T.C., Hall C.B., Hammond G.W., Piedra P.A., Storch G.A., Sullender W.M., et al. Circulation patterns of group A and B respiratory syncytial virus genotypes in 5 communities in North America. J. Infect. Dis. 181 (2000) 1891-1896
32. Venter M., Collinson M., and Schoub B.D. Molecular epidemiological analysis of community circulating respiratory syncytial virus in rural South Africa: comparison of viruses and genotypes responsible for different disease manifestations. J. Med. Virol. 68 (2002) 452-461
33. Roca A., Loscertales M.P., Quinto L., Perez-Brena P., Vaz N., Alonso P.L., et al. Genetic variability among group A and B respiratory syncytial viruses in Mozambique: identification of a new cluster of group B isolates. J. Gen. Virol. 82 (2001) 103-111
34. Sanz M.C., Kew O.M., and Anderson L.J. Genetic heterogeneity of the attachment glycoprotein G among group A respiratory syncytial viruses. Virus Res. 33 (1994) 203-217
35. Sato M., Saito R., Sakai T., Sano Y., Nishikawa M., Sasaki A., et al. Molecular epidemiology of respiratory syncytial virus infections among children with acute respiratory symptoms in a community over three seasons. J. Clin. Microbiol. 43 (2005) 36-40
36. Cane P.A., and Pringle C.R. Evolution of subgroup A respiratory syncytial virus: evidence for progressive accumulation of aminoacid changes in the attachment protein. J. Virol. 69 (1995) 2918-2925
37. Baumeister E.G., Hunicken D.S., and Savy V.L. RSV molecular characterization and specific antibody response in young children with acute lower respiratory infection. J. Clin. Virol. 27 (2003) 44-51
38. Frabasile S., Delfraro A., Facal L., Videla C., Galiano M., de Sierra M.J., et al. Antigenic and genetic variability of human respiratory syncytial viruses (group A) isolated in Uruguay and Argentina: 1993-2001. J. Med. Virol. 73 (2003) 305-312
39. Madhi S.A., Venter M., Alexandra R., Lewis H., Kara Y., Karshagen W.F., et al. Respiratory syncytial virus associated illness in high-risk children and national characterisation of the circulating virus genotype in South Africa. J. Clin. Virol. 27 (2003) 180-189
40. Moura F.E.A., Blanc A., Frabasile S., Delfraro A., de Sierra M.J., Tome L., et al. Genetic diversity of respiratory syncytial virus isolated during an epidemic period from children of Northeastern Brazil. J. Med. Virol. 74 (2004) 156-160
41. Garcia O., Martin M., Dopazo J., Arbiza J., Frabasile S., Russi J., et al. Evolutionary pattern of human respiratory syncytial virus (subgroup A): cocirculating lineages and correlation of genetic and antigenic changes in the G glycoprotein. J. Virol. 68 (1994) 5448-5459
42. Coggins W.B., Lefkowitz E.J., and Sullender W.M. Genetic variability among group A and group B respiratory syncytial viruses in a children's hospital. J. Clin. Microbiol. 36 (1998) 3552-3557
43. Zlateva K.T., Lemey P., Moes E., Vandamme A.M., and Van Ranst M. Molecular evolution and circulation patterns of human respiratory syncytial virus subgroup A: positively selected sites in the attachment G glycoprotein. J. Virol. 78 (2004) 4675-4683
44. Garcia-Barreno B., Palomo C., Penas C., Delgado T., Perez-Brena P., and Melero J.A. Marked differences in the antigenic structure of human respiratory syncytial F and G glycoproteins. J. Virol. 63 (1989) 925-932
45. Rueda P., Delgado T., Portela A., Melero J.A., and Garcia-Barreno B. Premature stop-codons in the G glycoprotein of human respiratory syncytial virus resistant to neutralization by monoclonal antibodies. J. Virol. 65 (1991) 3374-3378
46. Rueda P., Palomo C., Garcia-Barreno B., and Melero J.A. The three C-terminal residues of human respiratory syncytial virus G glycoprotein (Long strain) are essential for integrity of multiple epitopes distinguishable by anti-idiotypic antibodies. Viral Immunol. 8 (1995) 37-46
47. Cane P.A., Thomas H.M., Simpson A.F., Evans J.E., Hart C.A., and Pringle C.R. Analysis of the human serological immune response to the variable region of the attachment (G) protein of respiratory syncytial virus during primary infection. J. Med. Virol. 48 (1996) 253-261
48. Martinez I., Dopazo J., and Melero J.A. Antigenic structure of the human respiratory syncytial virus G glycoprotein and relevance of hypermutation events for the generation of antigenic variants. J. Gen. Virol. 78 (1997) 2419-2429