Possible roles of vacuolar H+-ATPase and mitochondrial function in tolerance to air-drying stress revealed by genome-wide screening of Saccharomyces cerevisiae deletion strains

Yeast

Volumn 25, Issue 3, 2008, Pages 179-190

  Shima, Jun ^a   Ando, Akira ^a   Takagi, Hiroshi ^b  

^a NATIONAL FOOD RESEARCH INSTITUTE   (Japan)

^b NARA INSTITUTE OF SCIENCE AND TECHNOLOGY   (Japan)

Author keywords

Air drying stress; Baker's yeast; Dehydration; Deletion mutant collection; Stress tolerance

Indexed keywords

PROTON TRANSPORTING ADENOSINE TRIPHOSPHATE SYNTHASE; VESICULAR MONOAMINE TRANSPORTER 2;

ACIDIFICATION; ARTICLE; CELL FUNCTION; CELL PH; CONTROLLED STUDY; CORRELATION FUNCTION; DEHYDRATION; DELETION MUTANT; ENVIRONMENTAL STRESS; FUNGAL STRAIN; GENE AMPLIFICATION; GENE LOCATION; GENOME ANALYSIS; HOMEOSTASIS; MEMBRANE POTENTIAL; MITOCHONDRIAL MEMBRANE; MITOCHONDRION; NONHUMAN; OXIDATIVE STRESS; PRIORITY JOURNAL; SACCHAROMYCES CEREVISIAE; SENSITIVITY ANALYSIS;

AIR; DIPLOIDY; FERMENTATION; GENE EXPRESSION REGULATION, FUNGAL; GENOME, FUNGAL; HOMEOSTASIS; HYDROGEN-ION CONCENTRATION; MITOCHONDRIA; MUTAGENESIS, INSERTIONAL; OXIDATIVE STRESS; SACCHAROMYCES CEREVISIAE; SACCHAROMYCES CEREVISIAE PROTEINS; SEQUENCE DELETION; VACUOLAR PROTON-TRANSLOCATING ATPASES;

SACCHAROMYCES CEREVISIAE;

EID: 41549143168     PISSN: 0749503X     EISSN: 10970061     Source Type: Journal    
DOI: 10.1002/yea.1577     Document Type: Article

References (45)

1. Abe F, Horikoshi K. 1998. Analysis of intracellular pH in the yeast Saccharomyces cerevisiae under elevated hydrostatic pressure: a study in baro- (piezo-) physiology. Extremophiles 2: 223-228.
2. Ando A, Nakamura T, Murata Y, et al. 2007. Identification and classification of genes required for tolerance to freeze - thaw stress revealed by genome-wide screening of Saccharomyces cerevisiae deletion strains. FEMS Yeast Res 7: 244-253.
3. Ando A, Tanaka F, Murata Y, et al. 2006. Identification and classification of genes required for tolerance to high-sucrose stress revealed by genome-wide screening of Saccharomyces cerevisiae. FEMS Yeast Res 6: 249-267.
4. Attfield PV. 1997. Stress tolerance: the key to effective strains of industrial baker's yeast. Nat Biotechnol 15: 1351-1357.
5. Bassnett S, Reinisch L, Beebe DC. 1990. Intracellular pH measurement using single excitation - dual emission fluorescence ratios. Am J Physiol 258: C171-178.
6. Bell W, Klaassen P, Ohnacker M, et al. 1992. Characterization of the 56-kDa subunit of yeast trehalose-6-phosphate synthase and cloning of its gene reveal its identity with the product of CIF1, a regulator of carbon catabolite inactivation. Eur J Biochem 209: 951-959.
7. Berlett BS, Stadtman ER. 1997. Protein oxidation in aging, disease, and oxidative stress. J Biol Chem 272: 20313-20316.
8. Beudeker RF, Van Dam HW, Van der Plaat JB, et al. 1990. Developments in baker's yeast production. In Yeast Biotechnology and Biocatalysis, Verachtert H, De Mot R (eds). Marcel Dekker: New York; 103-146.
9. Birrell GW, Brown JA, Wu HI, et al. 2002. Transcriptional response of Saccharomyces cerevisiae to DNA-damaging agents does not identify the genes that protect against these agents. Proc Natl Acad Sci USA 99: 8778-8783.
10. Buitink J, Leprince O. 2004. Glass formation in plant anhydrobiotes: survival in the dry state. Cryobiology 48: 215-228.
11. Burrows S. 1970. Baker's yeast. In The Yeasts, Rose AH, Harrison JS (eds). Academic Press: New York; 349-420.
12. Carmelo V, Santos H, Sa-Correia I. 1997. Effect of extracellular acidification on the activity of plasma membrane ATPase and on the cytosolic and vacuolar pH of Saccharomyces cerevisiae. Biochim Biophys Acta 1325: 63-70.
13. Crowe JH, Hoekstra FA, Crowe LM. 1992. Anhydrobiosis. Annu Rev Physiol 54: 579-599.
14. Eleutherio EC, Araujo PS, Panek AD. 1993. Role of the trehalose carrier in dehydration resistance of Saccharomyces cerevisiae. Biochim Biophys Acta 1156: 263-266.
15. Evans LH. 1990. Yeast strains for baking: recent developments. In Yeast Technology, Spencer JFT, Spencer DM (eds). Springer-Verlag: Berlin, Heidelberg; 13-54.
16. Fernandez-Ricaud L, Warringer J, Ericson E, et al. 2005. PROPHECY - a database for high-resolution phenomics. Nucleic Acids Res. 33: D369-373.
17. Franca MB, Panek AD, Eleutherio EC. 2006. Oxidative stress and its effects during dehydration. Comp Biochem Physiol A Mol Integr Physiol 146: 621-631.
18. Gadd GM, Chalmers K, Reed RH. 1987. The role of trehalose in dehydration resistance of Saccharomyces cerevisiae. FEMS Microbiol Lett 48: 249-254.
19. Giaever G, Chu AM, Ni L, et al. 2002. Functional profiling of the Saccharomyces cerevisiae genome. Nature 418: 387-391.
20. Grant CM, MacIver FH, Dawes IW. 1997. Mitochondrial function is required for resistance to oxidative stress in the yeast Saccharomyces cerevisiae. FEBS Lett 410: 219-222.
21. Hounsa CG, Brandt EV, Thevelein J, et al. 1998. Role of trehalose in survival of Saccharomyces cerevisiae under osmotic stress. Microbiology 144: 671-680.
22. Jamieson DJ. 1998. Oxidative stress responses of the yeast Saccharomyces cerevisiae. Yeast 14: 1511-1527.
23. Kandror O, Bretschneider N, Kreydin E, et al. 2004. Yeast adapt to near-freezing temperatures by STRE/Msn2,4-dependent induction of trehalose synthesis and certain molecular chaperones. Mol Cell 13: 771-781.
24. Leao C, Van Uden N. 1984. Effects of ethanol and other alkanols on passive proton influx in the yeast Saccharomyces cerevisiae. Biochim Biophys Acta 774: 43-48.
25. McIlvain TC. 1921. A buffer solution for colorimetric comparison. J Biol Chem 49: 183-186.
26. Oliver AE, Leprince O, Wolkers WF, et al. 2001. Non-disaccharide-based mechanisms of protection during drying. Cryobiology 43: 151-167.
27. Pereira Ede J, Panek AD, Eleutherio EC. 2003. Protection against oxidation during dehydration of yeast. Cell Stress Chaperones 8: 120-124.
28. Piper PW. 1993. Molecular events associated with acquisition of heat tolerance by the yeast Saccharomyces cerevisiae. FEMS Microbiol Rev 11: 339-355.
29. Poot M, Zhang YZ, Kramer JA, et al. 1996. Analysis of mitochondrial morphology and function with novel fixable fluorescent stains. J Histochem Cytochem 44: 1363-1372.
30. Robinson MD, Grigull J, Mohammad N, et al. 2002. FunSpec: a web-based cluster interpreter for yeast. BMC Bioinform 3: 35.
31. Seksek O, Henry-Toulme N, Sureau F, et al. 1991. SNARF-1 as an intracellular pH indicator in laser microspectrofluorometry: a critical assessment. Anal Biochem 193: 49-54.
32. Soto T, Fernandez J, Vicente-Soler J, et al. 1999. Accumulation of trehalose by overexpression of tps1, coding for trehalose-6-phosphate synthase, causes increased resistance to multiple stresses in the fission yeast Schizosaccharomyces pombe. Appl Environ Microbiol 65: 2020-2024.
33. Storz G, Christman MF, Sies H, et al. 1987. Spontaneous mutagenesis and oxidative damage to DNA in Salmonella typhimurium. Proc Natl Acad Sci USA 84: 8917-8921.
34. Suzuki C, Shimma YI. 1999. P-type ATPase spf1 mutants show a novel resistance mechanism for the killer toxin SMKT. Mol Microbiol 32: 813-823.
35. Tanaka F, Ando A, Nakamura T, et al. 2006. Functional genomic analysis of commercial baker's yeast during initial stages of model dough-fermentation. Food Microbiol 23: 717-728.
36. Thorpe GW, Fong CS, Alic N, et al. 2004. Cells have distinct mechanisms to maintain protection against different reactive oxygen species: oxidative-stress-response genes. Proc Natl Acad Sci USA 101: 6564-6569.
37. Valli M, Sauer M, Branduardi P, et al. 2005. Intracellular pH distribution in Saccharomyces cerevisiae cell populations, analysed by flow cytometry. Appl Environ Microbiol 71: 1515-1521.
38. van Voorst F, Houghton-Larsen J, Jonson L, et al. 2006. Genome-wide identification of genes required for growth of Saccharomyces cerevisiae under ethanol stress. Yeast 23: 351-359.
39. Vashist S, Frank CG, Jakob CA, et al. 2002. Two distinctly localized P-type ATPases collaborate to maintain organelle homeostasis required for glycoprotein processing and quality control. Mol Biol Cell 13: 3955-3966.
40. Vuorio OE, Kalkkinen N, Londesborough J. 1993. Cloning of two related genes encoding the 56-kDa and 123-kDa subunits of trehalose synthase from the yeast Saccharomyces cerevisiae. Eur J Biochem 216: 849-861.
41. Wach A, Brachat A, Pohlmann R, et al. 1994. New heterologous modules for classical or PCR-based gene disruptions in Saccharomyces cerevisiae. Yeast 10: 1793-1808.
42. Warringer J, Ericson F, Fernandez L, et al. 2003. High-resolution yeast phenomics resolves different physiological features in the saline response. Proc Natl Acad Sci USA 100: 15724-15729.
43. Weitzel G, Pilatus U, Rensing L. 1987. The cytoplasmic pH, ATP content and total protein synthesis rate during heat-shock protein inducing treatments in yeast. Exp Cell Res 170: 64-79.
44. Wolff SP, Garner A, Dean RT. 1986. Free radicals, lipids and protein degradation. Trends Biochem Sci 11: 27-31.
45. Yancey PH, Clark ME, Hand SC, et al. 1982. Living with water stress: evolution of osmolyte systems. Science 217: 1214-1222.