PF15p is the Chlamydomonas homologue of the katanin p80 subunit and is required for assembly of flagellar central microtubules

Eukaryotic Cell

Volumn 3, Issue 4, 2004, Pages 870-879

  Dymek, Erin E ^a   Lefebvre, Paul A ^b   Smith, Elizabeth F ^a  

^a Dartmouth College ^*  (United States)

^b UNIVERSITY OF MINNESOTA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ADENOSINE TRIPHOSPHATASE; ALGAL PROTEIN; KATANIN; MICROTUBULE PROTEIN; PROTEIN SUBUNIT;

AMINO ACID SEQUENCE; ANIMAL; ARTICLE; CELL MOTION; CHLAMYDOMONAS REINHARDTII; CLASSIFICATION; CYTOLOGY; FLAGELLUM; GENETICS; METABOLISM; MICROTUBULE; MOLECULAR GENETICS; PHENOTYPE; PHYLOGENY; PHYSIOLOGY; SEQUENCE ALIGNMENT; ULTRASTRUCTURE;

ADENOSINE TRIPHOSPHATASES; ALGAL PROTEINS; AMINO ACID SEQUENCE; ANIMALS; CELL MOVEMENT; CHLAMYDOMONAS REINHARDTII; FLAGELLA; MICROTUBULE PROTEINS; MICROTUBULES; MOLECULAR SEQUENCE DATA; PHENOTYPE; PHYLOGENY; PROTEIN SUBUNITS; SEQUENCE ALIGNMENT;

ALGAE; CHLAMYDOMONAS; EUKARYOTA;

EID: 4143093686     PISSN: 15359778     EISSN: None     Source Type: Journal    
DOI: 10.1128/EC.3.4.870-879.2004     Document Type: Article

References (67)

1. Adams, G. M., B. Huang, G. Piperno, and D. J. Luck. 1981. Central-pair microtubular complex of Chlamydomonas flagella: polypeptide composition as revealed by analysis of mutants. J. Cell Biol. 91:69-76.
2. Ahmad, F. J., W. Yu, F. J. McNally, and P. W. Baas. 1999. An essential role for katanin in severing microtubules in the neuron. J. Cell Biol. 145:305-315.
3. Altschul, S. F., W. Gish, W. Miller, E. W. Myers, and D. J. Lipman. 1990. Basic local alignment search tool. J. Mol. Biol. 215:403-410.
4. Altschul, S. F., and D. J. Lipman. 1990. Protein database searches for multiple alignments. Proc. Natl. Acad. Sci. USA 87:5509-5513.
5. Bouquin, T., O. Mattsson, H. Naested, R. Foster, and, J. Mundy. 2003. The Arabidopsis lue1 mutant defines a katanin p60 ortholog involved in hormonal control of microtubule orientation during cell growth. J. Cell Sci. 116:791-801.
6. Burk, D. H., B. Liu, R. Zhong, W. H. Morrison, and Z. H. Ye. 2001. A katanin-like protein regulates normal cell wall biosynthesis and cell elongation. Plant Cell 13:807-827.
7. Buster, D., K. McNally, and F. J. McNally. 2002. Katanin inhibition prevents the redistribution of gamma-tubulin at mitosis. J. Cell Sci. 115:1083-1092.
8. Chisholm, D. 1989. A convenient moderate-scale procedure for obtaining DNA from bacteriophage lambda. BioTechniques 7:21-23.
9. Clark-Maguire, S., and P. E. Mains. 1994. Localization of the mei-1 gene product of Caenorhabditis elegans, a meiotic-specific spindle component. J. Cell Biol. 126:199-209.
10. Clark-Maguire, S., and P. E. Mains. 1994. mei-1, a gene required for meiotic spindle formation in Caenorhabditis elegans, is a member of a family of ATPases. Genetics 136:533-546.
11. Davies, J. P., F. Yildiz, and A. R. Grossman. 1994. Mutants of Chlamydomonas with aberrant responses to sulfur deprivation. Plant Cell 6:53-63.
12. Davies, J. P., F. H. Yildiz, and A. Grossman. 1996. Sac1, a putative regulator that is critical for survival of Chlamydomonas reinhardtii during sulfur deprivation. EMBO J. 15:2150-2159.
13. Debuchy, R., S. Purton, and J. D. Rochaix. 1989. The argininosuccinate lyase gene of Chlamydomonas reinhardtii: an important tool for nuclear transformation and for correlating the genetic and molecular maps of the ARG7 locus. EMBO J. 8:2803-2809.
14. Dentler, W. L. 1980. Structures linking the tips of ciliary and flagellar microtubules to the membrane. J. Cell Sci. 42:207-220.
15. Devereux, J., P. Haeberli, and O. Smithies. 1984. A comprehensive set of sequence analysis programs for the VAX. Nucleic Acids Res. 12:387-395.
16. Dutcher, S. K., B. Huang, and D. J. Luck. 1984. Genetic dissection of the central pair microtubules of the flagella of Chlamydomonas reinhardtii. J. Cell Biol. 98:229-236.
17. Euteneuer, U., and J. R. McIntosh. 1981. Polarity of some motility-related microtubules. Proc. Natl. Acad. Sci. USA 78:372-376.
18. Fernandez, E., R. Schnell, L. P. Ranum, S. C. Hussey, C. D. Silflow, and P. A. Lefebvre. 1989. Isolation and characterization of the nitrate reductase structural gene of Chlamydomonas reinhardtii. Proc. Natl. Acad. Sci. USA 86:6449-6453.
19. Finst, R. J., P. J. Kim, and L. M. Quarmby. 1998. Genetics of the deflagellation pathway in Chlamydomonas. Genetics 149:927-936.
20. Fong, H. K., J. B. Hurley, R. S. Hopkins, R. Miake-Lye, M. S. Johnson, R. F. Doolittle, and M. I. Simon. 1986. Repetitive segmental structure of the transducin beta subunit: homology with the CDC4 gene and identification of related mRNAs. Proc. Natl. Acad. Sci. USA 83:2162-2166.
21. Frohman, M. A., M. K. Dush, and G. R. Martin. 1988. Rapid production of full-length cDNAs from rare transcripts: amplification using a single gene-specific oligonucleotide primer. Proc. Natl. Acad. Sci. USA 85:8998-9002.
22. Goodenough, U. W., and J. E. Heuser. 1985. Substructure of inner dynein arms, radial spokes, and the central pair/projection complex of cilia and flagella. J. Cell Biol. 100:2008-2018.
23. Gorman, D. S., and R. P. Levine. 1965. Cytochrome f and plastocyanin: their sequence in the photosynthetic electron transport chain of Chlamydomonas reinhardtii. Proc. Natl. Acad. Sci. USA 54:1665-1669.
24. Hartman, J. J., J. Mahr, K. McNally, K. Okawa, A. Iwamatsu, S. Thomas, S. Cheesman, J. Heuser, R. D. Vale, and F. J. McNally. 1998. Katanin, a microtubule-severing protein, is a novel AAA ATPase that targets to the centrosome using a WD40-containing subunit. Cell 93:277-287.
25. James, S. W., L. P. Ranum, C. D. Silflow, and P. A. Lefebvre. 1988. Mutants resistant to anti-microtubule herbicides map to a locus on the uni linkage group in Chlamydomonas reinhardtii. Genetics 118:141-147.
26. Kathir, P., M. LaVoie, W. J. Brazelton, N. A. Haas, P. A. Lefebvre, and C. D. Silflow. 2003. Molecular map of the Chlamydomonas reinhardtii nuclear genome. Eukaryot. Cell 2:362-379.
27. Kindle, K. L. 1990. High-frequency nuclear transformation of Chlamydomonas reinhardtii. Proc. Natl. Acad. Sci. USA 87:1228-1232.
28. King, S. M., T. Otter, and G. B. Witman. 1986. Purification and characterization of Chlamydomonas flagellar dyneins. Methods Enzymol. 134:291-306.
29. Lefebvre, P. A., C. D. Silflow, E. D. Wieben, and J. L. Rosenbaum. 1980. Increased levels of mRNAs for tubulin and other flagellar proteins after amputation or shortening of Chlamydomonas flagella. Cell 20:469-477.
30. Lohret, T. A., F. J. McNally, and L. M. Quarmby. 1998. A role for katanin-mediated axonemal severing during Chlamydomonas deflagellation. Mol. Biol. Cell 9:1195-1207.
31. Lohret, T. A., L. Zhao, and L. M. Quarmby. 1999. Cloning of Chlamydomonas p60 katanin and localization to the site of outer doublet severing during deflagellation. Cell Motil. Cytoskeleton 43:221-231.
32. Lux, F. G., III, and S. K. Dutcher. 1991. Genetic interactions at the FLA10 locus: suppressors and synthetic phenotypes that affect the cell cycle and flagellar function in Chlamydomonas reinhardtii. Genetics 128:549-561.
33. Mains, P. E., K. J. Kemphues, S. A. Sprunger, I. A. Sulston, and W. B. Wood. 1990. Mutations affecting the meiotic and mitotic divisions of the early Caenorhabditis elegans embryo. Genetics 126:593-605.
34. McKean, P. G., A. Baines, S. Vaughan, and K. Gull. 2003. Gamma-tubulin functions in the nucleation of a discrete subset of microtubules in the eukaryotic flagellum. Curr. Biol. 13:598-602.
35. McNally, F. J., K. Okawa, A. Iwamatsu, and R. D. Vale. 1996. Katanin, the microtubule-severing ATPase, is concentrated at centrosomes. J. Cell Sci. 109:561-567.
36. McNally, F. J., and R. D. Vale. 1993. Identification of katanin, an ATPase that severs and disassembles stable microtubules. Cell 75:419-429.
37. McNally, K. P., O. A. Bazirgan, and F. J. McNally. 2000. Two domains of p80 katanin regulate microtubule severing and spindle pole targeting by p60 katanin. J. Cell Sci. 113:1623-1633.
38. Mitchell, D. R. 2003. Reconstruction of the projection periodicity and surface architecture of the flagellar central pair complex. Cell Motil. Cytoskeleton 55:188-199.
39. Mitchell, D. R., and W. S. Sale. 1999. Characterization of a Chlamydomonas insertional mutant that disrupts flagellar central pair microtubule-associated structures. J. Cell Biol. 144:293-304.
40. Nakano, I., T. Kobayashi, M. Yoshimura, and C. Shingyoji. 2003. Central-pair-linked regulation of microtubule sliding by calcium in flagellar axonemes. J. Cell Sci. 116:1627-1636.
41. Nelson, J. A., and P. A. Lefebvre. 1995. Transformation of Chlamydomonas reinhardtii. Methods Cell Biol. 47:513-517.
42. Nelson, J. A., P. B. Savereide, and P. A. Lefebvre. 1994. The CRY1 gene in Chlamydomonas reinhardtii: structure and use as a dominant selectable marker for nuclear transformation. Mol. Cell. Biol. 14:4011-4019.
43. Porter, M. E., and W. S. Sale. 2000. The 9 + 2 axoneme anchors multiple inner arm dyneins and a network of kinases and phosphatases that control motility. J. Cell Biol. 151:F37-F42.
44. Qin, H., D. R. Diener, S. Geimer, D. G. Cole, and J. L. Rosenbaum. 2004. Intraflagellar transport (IFT) cargo: IFT transports flagellar precursors to the tip and turnover products to the cell body. J. Cell Biol. 164:255-266.
45. Randall, J. T., T. Cavalier-Smith, A. McVittie, J. T. Warr, and J. M. Hopkins. 1967. Developmental and control processes in the basal bodies and flagella of Chlamydomonas reinhardtii. Dev. Biol. 1(Suppl.):43-83.
46. Randall, J. T., J. R. Warr, J. M. Hopkins, and A. McVittie. 1964. A single gene mutation of Chlamydomonas reinhardtii affecting motility: a genetic and electron microscope study. Nature 203:912-914.
47. Rupp, G., E. O'Toole, and M. E. Porter. 2001. The Chlamydomonas PF6 locus encodes a large alanine/proline-rich polypeptide that is required for assembly of a central pair projection and regulates flagellar motility. Mol. Biol. Cell 12:739-751.
48. Sager, R., and S. Granick. 1953. Nutritional studies in Chlamydomonas reinhardtii. Ann. N. Y. Acad. Sci. 56:831-838.
49. Sambrook, J., E. F. Fritsch, and T. Maniatis. 1982. Molecular cloning: a laboratory manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
50. Silflow, C. D., M. LaVoie, L. W. Tam, S. Tousey, M. Sanders, W. Wu, M. Borodovsky, and P. A. Lefebvre. 2001. The Vfl1 protein in Chlamydomonas localizes in a rotationally asymmetric pattern at the distal ends of the basal bodies. J. Cell Biol. 153:63-74.
51. Silflow, C. D., B. Liu, M. LaVoie, E. A. Richardson, and B. A. Palevitz. 1999. Gamma-tubulin in Chlamydomonas: characterization of the gene and localization of the gene product in cells. Cell Motil. Cytoskeleton 42:285-297.
52. Smith, E. F. 2002. Regulation of flagellar dynein by calcium and a role for an axonemal calmodulin and calmodulin-dependent kinase. Mol. Biol. Cell 13:3303-3313.
53. Smith, E. F. 2002. Regulation of flagellar dynein by the axonemal central apparatus. Cell Motil. Cytoskeleton 52:33-42.
54. Smith, E. F., and P. A. Lefebvre, 1996. PF16 encodes a protein with armadillo repeats and localizes to a single microtubule of the central apparatus in Chlamydomonas flagella. J. Cell Biol. 132:359-370.
55. Smith, E. F., and P. A. Lefebvre. 1997. PF20 gene product contains WD repeats and localizes to the intermicrotubule bridges in Chlamydomonas flagella. Mol. Biol. Cell 8:455-467.
56. Smith, E. F., and P. A. Lefebvre. 1997. The role of central apparatus components in flagellar motility and microtubule assembly. Cell Motil. Cytoskeleton 38:1-8.
57. Srayko, M., D. W. Buster, O. A. Bazirgan, F. J. McNally, and P. E. Mains. 2000. MEI-1/MEI-2 katanin-like microtubule severing activity is required for Caenorhabditis elegans meiosis. Genes Dev. 14:1072-1084.
58. Tam, L. W., and P. A. Lefebvre. 1993. Cloning of flagellar genes in Chlamydomonas reinhardtii by DNA insertional mutagenesis. Genetics 135:375-384.
59. Thazhath, R., C. Liu, and J. Gaertig. 2002. Polyglycylation domain of beta-tubulin maintains axonemal architecture and affects cytokinesis in Tetrahymena. Nat. Cell Biol. 4:256-259.
60. Wargo, M. J., and E. F. Smith. 2003. Asymmetry of the central apparatus defines the location of active microtubule sliding in Chlamydomonas flagella. Proc. Natl. Acad. Sci. USA 100:137-142.
61. Warr, J. R., A. McVittie, J. T. Randall, and J. M. Hopkins. 1966. Genetic control of flagellar structure in Chlamydomonas reinhardtii. Genet. Res. 7:335-351.
62. Webb, M., S. Jouannic, J. Foreman, P. Linstead, and L. Dolan. 2002. Cell specification in the Arabidopsis root epidermis requires the activity of Ectopic Root Hair 3 - a katanin-p60 protein. Development 129:123-131.
63. Wilkerson, C. G., S. M. King, A. Koutoulis, G. J. Pazour, and G. B. Witman. 1995. The 78,000 M(r) intermediate chain of Chlamydomonas outer arm dynein is a WD-repeat protein required for arm assembly. J. Cell Biol. 129:169-178.
64. Wilkerson, C. G., S. M. King, and G. B. Witman. 1994. Molecular analysis of the gamma heavy chain of Chlamydomonas flagellar outer-arm dynein. J. Cell Sci. 107:497-506.
65. Witman, G. B. 1986. Isolation of Chlamydomonas flagella and flagellar axonemes. Methods Enzymol. 134:280-290.
66. Wright, R. L., J. Salisbury, and J. W. Jarvik. 1985: A nucleus-basal body connector in Chlamydomonas reinhardtii that may function in basal body localization or segregation. J. Cell Biol. 101:1903-1912.
67. Yang, P., and W. S. Sale. 1998. The Mr 140,000 intermediate chain of Chlamydomonas flagellar inner arm dynein is a WD-repeat protein implicated in dynein arm anchoring. Mol. Biol. Cell 9:3335-3349.