-
1
-
-
84907150192
-
-
International Rice Genome Sequencing Project: The map-based sequence of the rice genome. Nature 2005, 436:793-800.
-
International Rice Genome Sequencing Project: The map-based sequence of the rice genome. Nature 2005, 436:793-800.
-
-
-
-
2
-
-
0038363572
-
Rice
-
Smartt J., and Simmonds N.W. (Eds), Longman Scientific and Technical
-
Chang T.T. Rice. In: Smartt J., and Simmonds N.W. (Eds). Evolution of Crop Plants. edn 2 (1995), Longman Scientific and Technical
-
(1995)
Evolution of Crop Plants. edn 2
-
-
Chang, T.T.1
-
3
-
-
0030880972
-
Seed banks and molecular maps: unlocking genetic potential from the wild
-
Tanksley S.D., and McCouch S.R. Seed banks and molecular maps: unlocking genetic potential from the wild. Science 277 (1997) 1063-1066
-
(1997)
Science
, vol.277
, pp. 1063-1066
-
-
Tanksley, S.D.1
McCouch, S.R.2
-
4
-
-
0000226122
-
Founder effect in crop-plant evolution
-
Ladinsky G. Founder effect in crop-plant evolution. Econ Bot 39 (1985) 191-198
-
(1985)
Econ Bot
, vol.39
, pp. 191-198
-
-
Ladinsky, G.1
-
5
-
-
8844221323
-
Diversifying selection in plant breeding
-
McCouch S.R. Diversifying selection in plant breeding. PLoS Biol 2 (2004) e347
-
(2004)
PLoS Biol
, vol.2
-
-
McCouch, S.R.1
-
6
-
-
33847661877
-
Multilocus analysis of nucleotide variation of Oryza sativa and its wild relatives: severe bottleneck during the domestication of rice
-
Zhu Q., Zheng X., Luo J., Gaut B., and Ge S. Multilocus analysis of nucleotide variation of Oryza sativa and its wild relatives: severe bottleneck during the domestication of rice. Mol Biol Evol 24 (2007) 875-888
-
(2007)
Mol Biol Evol
, vol.24
, pp. 875-888
-
-
Zhu, Q.1
Zheng, X.2
Luo, J.3
Gaut, B.4
Ge, S.5
-
7
-
-
34848916049
-
Genome-wide patterns of nucleotide polymorphism in domesticated rice
-
This study examined SNP markers developed from 111 randomly sequenced regions of the genome (totaling approximately 54 kb) on 72 O. sativa and 21 O. rufipogon accessions. Consistent with previous reports, they identified five subpopulations within O. sativa and two populations within O. rufipogon. They found a genome-wide excess of high frequency derived SNPs, a pattern that has not been found in other domesticated crop species. Several demographic models were developed to explain these patterns of polymorphism. Their results support a bottleneck model that incorporates selective sweeps, or alternatively, a model that includes subdivision and gene flow.
-
Caicedo A.L., Williamson S.H., Hernandez R.D., Boyko A., Fledel-Alon A., York T.L., Polato N.R., Olsen K.M., Nielsen R., McCouch S.R., et al. Genome-wide patterns of nucleotide polymorphism in domesticated rice. PLoS Genet 3 (2007) e163. This study examined SNP markers developed from 111 randomly sequenced regions of the genome (totaling approximately 54 kb) on 72 O. sativa and 21 O. rufipogon accessions. Consistent with previous reports, they identified five subpopulations within O. sativa and two populations within O. rufipogon. They found a genome-wide excess of high frequency derived SNPs, a pattern that has not been found in other domesticated crop species. Several demographic models were developed to explain these patterns of polymorphism. Their results support a bottleneck model that incorporates selective sweeps, or alternatively, a model that includes subdivision and gene flow.
-
(2007)
PLoS Genet
, vol.3
-
-
Caicedo, A.L.1
Williamson, S.H.2
Hernandez, R.D.3
Boyko, A.4
Fledel-Alon, A.5
York, T.L.6
Polato, N.R.7
Olsen, K.M.8
Nielsen, R.9
McCouch, S.R.10
-
8
-
-
0003820722
-
-
Oka H.I. (Ed), Elsevier Science/Japan Scientific Societies Press, Tokyo. This book provides an overview of basic rice biology, genetics, and evolution and offers an excellent starting point for a wide range of plants scientists. The subject is approached from many angles, including ethnobotanical, agronomic, genetic, cytogenetic, physiological, molecular, etc. as it focuses on O. sativa, O. glaberrima and their respective wild ancestors.
-
Oka H.I. In: Oka H.I. (Ed). Origin of Cultivated Rice (1988), Elsevier Science/Japan Scientific Societies Press, Tokyo. This book provides an overview of basic rice biology, genetics, and evolution and offers an excellent starting point for a wide range of plants scientists. The subject is approached from many angles, including ethnobotanical, agronomic, genetic, cytogenetic, physiological, molecular, etc. as it focuses on O. sativa, O. glaberrima and their respective wild ancestors.
-
(1988)
Origin of Cultivated Rice
-
-
Oka, H.I.1
-
9
-
-
2442645495
-
A comparison of rice chloroplast genomes
-
Tang J., Xia H., Cao M., Zhang X., Zeng W., Hu S., Tong W., Wang J., Wang J., Yu J., et al. A comparison of rice chloroplast genomes. Plant Physiol 135 (2004) 314-420
-
(2004)
Plant Physiol
, vol.135
, pp. 314-420
-
-
Tang, J.1
Xia, H.2
Cao, M.3
Zhang, X.4
Zeng, W.5
Hu, S.6
Tong, W.7
Wang, J.8
Wang, J.9
Yu, J.10
-
10
-
-
33646850768
-
The rice mitochondrial genomes and their variations
-
Tian X., Zheng J., Hu S., and Yu J. The rice mitochondrial genomes and their variations. Plant Physiol 140 (2006) 401-410
-
(2006)
Plant Physiol
, vol.140
, pp. 401-410
-
-
Tian, X.1
Zheng, J.2
Hu, S.3
Yu, J.4
-
11
-
-
34249979055
-
Genetic structure and phylogeography of rice landraces in Yunnan, China, revealed by SSR
-
Zhang H., Sun J., Wang M., Liao D., Zeng Y., Shen S., Yu P., Mu P., Wang X., and Li Z. Genetic structure and phylogeography of rice landraces in Yunnan, China, revealed by SSR. Genome 50 (2006) 72-83
-
(2006)
Genome
, vol.50
, pp. 72-83
-
-
Zhang, H.1
Sun, J.2
Wang, M.3
Liao, D.4
Zeng, Y.5
Shen, S.6
Yu, P.7
Mu, P.8
Wang, X.9
Li, Z.10
-
12
-
-
0027817205
-
Distribution of deletion type in cpDNA of cultivated and wild rice
-
Chen W.-B., Nakamura I., Sato Y.-I., and Nakai H. Distribution of deletion type in cpDNA of cultivated and wild rice. Jpn J Genet 68 (1993) 597-603
-
(1993)
Jpn J Genet
, vol.68
, pp. 597-603
-
-
Chen, W.-B.1
Nakamura, I.2
Sato, Y.-I.3
Nakai, H.4
-
13
-
-
0036981948
-
Genetic differentiation of wild relatives of rice as assessed by RFLP analysis
-
Lu B.R., Zheng K.L., Qian H.R., and Zhuang J.Y. Genetic differentiation of wild relatives of rice as assessed by RFLP analysis. Theor Appl Genet 106 (2002) 101-106
-
(2002)
Theor Appl Genet
, vol.106
, pp. 101-106
-
-
Lu, B.R.1
Zheng, K.L.2
Qian, H.R.3
Zhuang, J.Y.4
-
14
-
-
0037225254
-
Polyphyletic origin of cultivated rice: Based on the interspersion pattern of SINEs
-
Cheng C.Y., Motohashi R., Tsuchimoto S., Fukuta Y., Ohtsubo H., and Ohtsubo E. Polyphyletic origin of cultivated rice: Based on the interspersion pattern of SINEs. Mol Biol Evol 20 (2003) 67-75
-
(2003)
Mol Biol Evol
, vol.20
, pp. 67-75
-
-
Cheng, C.Y.1
Motohashi, R.2
Tsuchimoto, S.3
Fukuta, Y.4
Ohtsubo, H.5
Ohtsubo, E.6
-
15
-
-
33745439823
-
Phylogeography of Asian wild rice, Oryza rufipogon reveals multiple independent domestications of cultivated rice Oryza sativa
-
Using a phylogeographic approach, this study examines a total of 2.2 kb of sequence variation across two nuclear and one chloroplast gene region under different levels of selection in 203 O. sativa cultivars and 161 O. rufipogon accessions to investigate the number and origin of rice domestication events. Their results support at least two independent domestications of O. sativa from geographically distinct O. rufipogon populations, corresponding to the indica and japonica varietal groups.
-
Londo J., Chiang Y., Hung K., Chiang T., and Schaal B. Phylogeography of Asian wild rice, Oryza rufipogon reveals multiple independent domestications of cultivated rice Oryza sativa. Proc Natl Acad Sci 103 (2006) 9578-9583. Using a phylogeographic approach, this study examines a total of 2.2 kb of sequence variation across two nuclear and one chloroplast gene region under different levels of selection in 203 O. sativa cultivars and 161 O. rufipogon accessions to investigate the number and origin of rice domestication events. Their results support at least two independent domestications of O. sativa from geographically distinct O. rufipogon populations, corresponding to the indica and japonica varietal groups.
-
(2006)
Proc Natl Acad Sci
, vol.103
, pp. 9578-9583
-
-
Londo, J.1
Chiang, Y.2
Hung, K.3
Chiang, T.4
Schaal, B.5
-
16
-
-
33646687243
-
Differentiation of a miniature inverted transposable element (MITE) system in Asian rice cultivars and its inference for a diphyletic origin of two sub-species of Asian cultivated rice
-
Hu H., Mu J., Zhange H., Tao Y., and Han B. Differentiation of a miniature inverted transposable element (MITE) system in Asian rice cultivars and its inference for a diphyletic origin of two sub-species of Asian cultivated rice. J Integ Pl Biol 48 (2006) 260-267
-
(2006)
J Integ Pl Biol
, vol.48
, pp. 260-267
-
-
Hu, H.1
Mu, J.2
Zhange, H.3
Tao, Y.4
Han, B.5
-
17
-
-
33846821972
-
Large-scale DNA polymorphism study of Oryza sativa and Oryza rufipogon reveals the origin and divergence of Asian rice
-
A polymorphism survey across ∼26 kb of sequence in 30 diverse O. sativa and O. rufipogon accessions was used to perform a phylogenetic analysis. The grouping of O. rufipogon accessions as sister groups to O. sativa accessions lends further support to the hypothesis of multiple rice domestications. The nucleotide diversity of indica genotypes was an order of magnitude greater than their japonica counterparts and japonica had a larger number of derived and fixed polymorphisms, which is likely because of a much larger effective population size in indica than in japonica. Linkage disequilibrium was found to decay within 5 kb in O. rufipogon, but extended to over 50 kb in indica.
-
Rakshit S., Rakshit A., Masumura H., Takahashi Y., Hasegawa Y., Ito A., Ishii T., Miyashita N., and Terauchi R. Large-scale DNA polymorphism study of Oryza sativa and Oryza rufipogon reveals the origin and divergence of Asian rice. Theor Appl Genet 114 (2007) 731-743. A polymorphism survey across ∼26 kb of sequence in 30 diverse O. sativa and O. rufipogon accessions was used to perform a phylogenetic analysis. The grouping of O. rufipogon accessions as sister groups to O. sativa accessions lends further support to the hypothesis of multiple rice domestications. The nucleotide diversity of indica genotypes was an order of magnitude greater than their japonica counterparts and japonica had a larger number of derived and fixed polymorphisms, which is likely because of a much larger effective population size in indica than in japonica. Linkage disequilibrium was found to decay within 5 kb in O. rufipogon, but extended to over 50 kb in indica.
-
(2007)
Theor Appl Genet
, vol.114
, pp. 731-743
-
-
Rakshit, S.1
Rakshit, A.2
Masumura, H.3
Takahashi, Y.4
Hasegawa, Y.5
Ito, A.6
Ishii, T.7
Miyashita, N.8
Terauchi, R.9
-
18
-
-
4344616881
-
Rapid recent growth and divergence of rice nuclear genomes
-
Ma J., and Bennetzen J. Rapid recent growth and divergence of rice nuclear genomes. Proc Natl Acad Sci 101 (2004) 12404-12410
-
(2004)
Proc Natl Acad Sci
, vol.101
, pp. 12404-12410
-
-
Ma, J.1
Bennetzen, J.2
-
19
-
-
13244264889
-
Genomic paleontology provides evidence for two distinct origns of Asian rice (Oryza sativa L.)
-
Vitte C., Ishii T., Lamy F., Brar D., and Panaud O. Genomic paleontology provides evidence for two distinct origns of Asian rice (Oryza sativa L.). Mol Genet Genomics 272 (2004) 504-511
-
(2004)
Mol Genet Genomics
, vol.272
, pp. 504-511
-
-
Vitte, C.1
Ishii, T.2
Lamy, F.3
Brar, D.4
Panaud, O.5
-
20
-
-
21244501403
-
Phylogenetic relationships among A-genome species of the genus Oryza revealed by intron sequences of four nuclear genes
-
The investigation of nucleotide diversity data from 10 unlinked nuclear loci (totaling approximately 8 kb) in 30 O. sativa and 30 O. rufipogon/O. nivara accessions reveals that O. rufipogon possesses similar levels of nuclear variation to wild relatives of other crops, but cultivated rice retains only 10-20% of the diversity of its wild ancestor. The indica varietal group was found to possess considerably more nucleotide diversity than japonica. While linkage disequilibrium decayed at around 400 bp in O. rufipogon, it extended across the entire sequenced region in their O. sativa samples. The data from this study also supports O. rufipogon and O. nivara as two ecotypes of the same species.
-
Zhu Q., and Ge S. Phylogenetic relationships among A-genome species of the genus Oryza revealed by intron sequences of four nuclear genes. New Phytol 167 (2005) 249-265. The investigation of nucleotide diversity data from 10 unlinked nuclear loci (totaling approximately 8 kb) in 30 O. sativa and 30 O. rufipogon/O. nivara accessions reveals that O. rufipogon possesses similar levels of nuclear variation to wild relatives of other crops, but cultivated rice retains only 10-20% of the diversity of its wild ancestor. The indica varietal group was found to possess considerably more nucleotide diversity than japonica. While linkage disequilibrium decayed at around 400 bp in O. rufipogon, it extended across the entire sequenced region in their O. sativa samples. The data from this study also supports O. rufipogon and O. nivara as two ecotypes of the same species.
-
(2005)
New Phytol
, vol.167
, pp. 249-265
-
-
Zhu, Q.1
Ge, S.2
-
21
-
-
33751367186
-
Genomic variation in rice: Genesis of highly polymorphic linkage blocks during domestication
-
Tang T., Lu J., Huang J., He J., McCouch S.R., Shen Y., Kai Z., Purugganan M.D., Shi S., and Wu C. Genomic variation in rice: Genesis of highly polymorphic linkage blocks during domestication. PLoS Genetics 2 11 (2006) e199
-
(2006)
PLoS Genetics
, vol.2
, Issue.11
-
-
Tang, T.1
Lu, J.2
Huang, J.3
He, J.4
McCouch, S.R.5
Shen, Y.6
Kai, Z.7
Purugganan, M.D.8
Shi, S.9
Wu, C.10
-
22
-
-
34250103509
-
Isozymes and classification of Asian rice varieties
-
Glaszmann J.C. Isozymes and classification of Asian rice varieties. Theor Appl Genet 74 (1987) 21-30
-
(1987)
Theor Appl Genet
, vol.74
, pp. 21-30
-
-
Glaszmann, J.C.1
-
23
-
-
17444386263
-
Genetic structure and diversity in Oryza sativa L.
-
Using 169 nuclear SSR and two chloroplast markers on a set of 234 diverse O. sativa landrace varieties, five distinct subpopulations were revealed with an average FST value of 0.37. The indica and aus subpopulations were more closely related to the indica varietal group while the tropical japonica, temperate japonica, and aromatic subpopulations were part of the japonica varietal group. These subpopulations correspond well to those first described by Glaszmann (1987) using 17 isozyme loci and have been confirmed by Caicedo et al. (2007) using SNP analysis.
-
Garris A.J., Tai T.H., Coburn J.R., Kresovich S., and McCouch S. Genetic structure and diversity in Oryza sativa L. Genetics 169 (2005) 1631-1638. Using 169 nuclear SSR and two chloroplast markers on a set of 234 diverse O. sativa landrace varieties, five distinct subpopulations were revealed with an average FST value of 0.37. The indica and aus subpopulations were more closely related to the indica varietal group while the tropical japonica, temperate japonica, and aromatic subpopulations were part of the japonica varietal group. These subpopulations correspond well to those first described by Glaszmann (1987) using 17 isozyme loci and have been confirmed by Caicedo et al. (2007) using SNP analysis.
-
(2005)
Genetics
, vol.169
, pp. 1631-1638
-
-
Garris, A.J.1
Tai, T.H.2
Coburn, J.R.3
Kresovich, S.4
McCouch, S.5
-
24
-
-
2442548838
-
Identification of SNPs in the waxy gene among glutinous rice cultivars and their evolutionary significance during the domestication process of rice
-
Yamanaka S., Nakamura I., Watanabe K.N., and Sato Y.I. Identification of SNPs in the waxy gene among glutinous rice cultivars and their evolutionary significance during the domestication process of rice. Theor Appl Genet 108 (2004) 1200-1204
-
(2004)
Theor Appl Genet
, vol.108
, pp. 1200-1204
-
-
Yamanaka, S.1
Nakamura, I.2
Watanabe, K.N.3
Sato, Y.I.4
-
25
-
-
33645469056
-
Rice domestication by reducing shattering
-
Li C., Zhou A., and Sang T. Rice domestication by reducing shattering. Science 311 (2006) 1936-1939
-
(2006)
Science
, vol.311
, pp. 1936-1939
-
-
Li, C.1
Zhou, A.2
Sang, T.3
-
26
-
-
34548457747
-
Global dissemination of a single mutation conferring white pericarp in rice
-
Sweeney M., Thomson M., Cho Y.G., Park Y.J., Williamson S.H., Bustamante C.D., and McCouch S.R. Global dissemination of a single mutation conferring white pericarp in rice. PLoS Genet 3 8 (2007) e133
-
(2007)
PLoS Genet
, vol.3
, Issue.8
-
-
Sweeney, M.1
Thomson, M.2
Cho, Y.G.3
Park, Y.J.4
Williamson, S.H.5
Bustamante, C.D.6
McCouch, S.R.7
-
27
-
-
35748969870
-
New insights into the history of rice domestication
-
This paper reviews the evolutionary histories of cloned domestication-related genes in rice and concludes that several key domestication alleles arose and were fixed in the japonica gene pool and subsequently spread into indica and throughout the rice world. This pattern suggests there was substantial gene flow between divergent subpopulations during the early domestication process, resulting in a common set of domestication alleles across O. sativa. How gene flow can be reconciled with the maintenance of several deeply differentiated subpopulations in O. sativa is also discussed.
-
Kovach M.J., Sweeney M., and McCouch S.R. New insights into the history of rice domestication. Trends Genet 23 11 (2007) 578-587. This paper reviews the evolutionary histories of cloned domestication-related genes in rice and concludes that several key domestication alleles arose and were fixed in the japonica gene pool and subsequently spread into indica and throughout the rice world. This pattern suggests there was substantial gene flow between divergent subpopulations during the early domestication process, resulting in a common set of domestication alleles across O. sativa. How gene flow can be reconciled with the maintenance of several deeply differentiated subpopulations in O. sativa is also discussed.
-
(2007)
Trends Genet
, vol.23
, Issue.11
, pp. 578-587
-
-
Kovach, M.J.1
Sweeney, M.2
McCouch, S.R.3
-
28
-
-
34347262453
-
The puzzle of rice domestication
-
The sh4 allele in rice is responsible for a major reduction in grain shattering, and this allele is fixed across all of O. sativa. In order to reconcile the data supporting multiple rice domestications with the presence of this common domestication gene, this review proposes both a 'snow-balling model' and a 'combination model' to describe the process of rice domestication. In the 'snow-balling model', key domestication alleles were fixed in a small O. rufipogon population, from which an early cultivar would have been selected and subsequently hybridized with local rice populations, giving rise to both indica and japonica genotypes fixed for the domestication alleles. The 'combination model' allows for divergent wild rice populations being slowly domesticated, with gene flow between early domesticates resulting in a common set of domestication alleles in both indica and japonica.
-
Sang T., and Ge S. The puzzle of rice domestication. J Integ Pl Biol 49 (2007) 760-768. The sh4 allele in rice is responsible for a major reduction in grain shattering, and this allele is fixed across all of O. sativa. In order to reconcile the data supporting multiple rice domestications with the presence of this common domestication gene, this review proposes both a 'snow-balling model' and a 'combination model' to describe the process of rice domestication. In the 'snow-balling model', key domestication alleles were fixed in a small O. rufipogon population, from which an early cultivar would have been selected and subsequently hybridized with local rice populations, giving rise to both indica and japonica genotypes fixed for the domestication alleles. The 'combination model' allows for divergent wild rice populations being slowly domesticated, with gene flow between early domesticates resulting in a common set of domestication alleles in both indica and japonica.
-
(2007)
J Integ Pl Biol
, vol.49
, pp. 760-768
-
-
Sang, T.1
Ge, S.2
-
29
-
-
0036166154
-
Diverse variation of reproductive barriers in three intraspecific rice crosses
-
Harushima Y., Nakagahra M., Yano M., Sasaki T., and Kurata N. Diverse variation of reproductive barriers in three intraspecific rice crosses. Genetics 160 (2002) 313-322
-
(2002)
Genetics
, vol.160
, pp. 313-322
-
-
Harushima, Y.1
Nakagahra, M.2
Yano, M.3
Sasaki, T.4
Kurata, N.5
-
30
-
-
6744271058
-
Constraints in using wild relatives in breeding: lack of basic knowledge on crop gene pools
-
Buxton D.R. (Ed), Crop Science Society of America
-
Sano Y. Constraints in using wild relatives in breeding: lack of basic knowledge on crop gene pools. In: Buxton D.R. (Ed). International Crop Science vol. I (1993), Crop Science Society of America 437-443
-
(1993)
International Crop Science
, vol.I
, pp. 437-443
-
-
Sano, Y.1
-
31
-
-
0036302260
-
Evaluation of genetic diversity in rice subspecies using microsatellite markers
-
Ni J., Colowit P.M., and Mackill D.J. Evaluation of genetic diversity in rice subspecies using microsatellite markers. Crop Sci 42 (2002) 601-607
-
(2002)
Crop Sci
, vol.42
, pp. 601-607
-
-
Ni, J.1
Colowit, P.M.2
Mackill, D.J.3
-
32
-
-
8444233467
-
Population structure and breeding patterns of 145 US rice cultivars based on SSR marker analysis
-
Lu H., Redus M.A., Coburn J.R., Rutger J.N., McCouch S.R., and Tai T.H. Population structure and breeding patterns of 145 US rice cultivars based on SSR marker analysis. Crop Sci 45 (2004) 66-76
-
(2004)
Crop Sci
, vol.45
, pp. 66-76
-
-
Lu, H.1
Redus, M.A.2
Coburn, J.R.3
Rutger, J.N.4
McCouch, S.R.5
Tai, T.H.6
-
34
-
-
0000554530
-
Hybrid rice: genetics, breeding, and seed production
-
Li J., and Yuan L. Hybrid rice: genetics, breeding, and seed production. Pl Breed Rev 17 (2000) 150-158
-
(2000)
Pl Breed Rev
, vol.17
, pp. 150-158
-
-
Li, J.1
Yuan, L.2
-
35
-
-
35349011689
-
-
Cheng S-H, Zhuang J-Y, Fan Y-Y, Du J-H, Cao L-Y: Progress in research and development on hybrid rice: a superdomesticate in China. Ann Bot 2007, 1-8, doi:10.1093/aob/mcm121.
-
Cheng S-H, Zhuang J-Y, Fan Y-Y, Du J-H, Cao L-Y: Progress in research and development on hybrid rice: a superdomesticate in China. Ann Bot 2007, 1-8, doi:10.1093/aob/mcm121.
-
-
-
-
36
-
-
33847782472
-
Through the genetic bottleneck: O. rufipogon as a source of trait-enhancing alleles for O. sativa
-
Several parallel advanced backcross QTL studies over the past decade were performed using a single accession of O. rufipogon (IRGC 105491) as the donor parent in combination with elite cultivars from around the world as recurrent parents. This paper summarizes the results of this research, including the identification of QTL and cloning of genes underlying several 'wild' QTL. These studies provide empirical evidence demonstrating the value of wild germplasm for improving yield and other agronomic traits in elite rice cultivars despite the inferior performance of the wild accessions. The authors also provide insights about strategies for utilizing wild germplasm in a more systematic manner.
-
McCouch S., Sweeney M., Li J., Jiang H., Thomson M., Septiningsih E., Edwards J., Moncada P., Xiao J., Garris A., et al. Through the genetic bottleneck: O. rufipogon as a source of trait-enhancing alleles for O. sativa. Euphytica 154 (2007) 317-339. Several parallel advanced backcross QTL studies over the past decade were performed using a single accession of O. rufipogon (IRGC 105491) as the donor parent in combination with elite cultivars from around the world as recurrent parents. This paper summarizes the results of this research, including the identification of QTL and cloning of genes underlying several 'wild' QTL. These studies provide empirical evidence demonstrating the value of wild germplasm for improving yield and other agronomic traits in elite rice cultivars despite the inferior performance of the wild accessions. The authors also provide insights about strategies for utilizing wild germplasm in a more systematic manner.
-
(2007)
Euphytica
, vol.154
, pp. 317-339
-
-
McCouch, S.1
Sweeney, M.2
Li, J.3
Jiang, H.4
Thomson, M.5
Septiningsih, E.6
Edwards, J.7
Moncada, P.8
Xiao, J.9
Garris, A.10
-
37
-
-
26444564625
-
Genome-wide introgression lines and their use in genetic and molecular dissection of complex phenotypes in rice (Oryza sativa L.)
-
Li Z.K., Fu B.Y., Gao Y.M., Xu J.L., Ali J., Lafitte H.R., Jiang Y.Z., Rey J.D., Vijayakumar C.H.M., Maghirang R., et al. Genome-wide introgression lines and their use in genetic and molecular dissection of complex phenotypes in rice (Oryza sativa L.). Plant Mol Biol 59 (2005) 33-52
-
(2005)
Plant Mol Biol
, vol.59
, pp. 33-52
-
-
Li, Z.K.1
Fu, B.Y.2
Gao, Y.M.3
Xu, J.L.4
Ali, J.5
Lafitte, H.R.6
Jiang, Y.Z.7
Rey, J.D.8
Vijayakumar, C.H.M.9
Maghirang, R.10
-
38
-
-
30644458994
-
Construction of introgression lines carrying wild rice (Oryza rufipogon Griff.) segments in cultivated rice (Oryza sativa L.) background and characterization of introgressed segments associated with yield-related traits
-
A set of 159 introgression lines (ILs) was developed between the recurrent parent Guichao 2 (indica) and a japonica-like O. rufipogon accession from eastern China. The 159 ILs captured 67.5% of the O. rufipogon genome, with only 2.2% donor genome per line. Three yield-related traits were measured at two sites, and 35% (6/17) QTL had positive alleles coming from the O. rufipogon parent.
-
Tian F., Li D., Fu Q., Zhu Z., Fu Y., Wang X., and Sun C. Construction of introgression lines carrying wild rice (Oryza rufipogon Griff.) segments in cultivated rice (Oryza sativa L.) background and characterization of introgressed segments associated with yield-related traits. Theor Appl Genet 112 (2006) 570-580. A set of 159 introgression lines (ILs) was developed between the recurrent parent Guichao 2 (indica) and a japonica-like O. rufipogon accession from eastern China. The 159 ILs captured 67.5% of the O. rufipogon genome, with only 2.2% donor genome per line. Three yield-related traits were measured at two sites, and 35% (6/17) QTL had positive alleles coming from the O. rufipogon parent.
-
(2006)
Theor Appl Genet
, vol.112
, pp. 570-580
-
-
Tian, F.1
Li, D.2
Fu, Q.3
Zhu, Z.4
Fu, Y.5
Wang, X.6
Sun, C.7
-
39
-
-
0031239602
-
Alien introgression in rice
-
Brar D.S., and Khush G.S. Alien introgression in rice. Pl Mol Biol 35 (1997) 35-47
-
(1997)
Pl Mol Biol
, vol.35
, pp. 35-47
-
-
Brar, D.S.1
Khush, G.S.2
-
40
-
-
11244271539
-
Fine mapping of a grain-weight quantitative trait locus in the pericentromeric region of rice chromosome 3
-
Li J., Thomson M.J., and McCouch S.R. Fine mapping of a grain-weight quantitative trait locus in the pericentromeric region of rice chromosome 3. Genetics 168 (2004) 2187-2195
-
(2004)
Genetics
, vol.168
, pp. 2187-2195
-
-
Li, J.1
Thomson, M.J.2
McCouch, S.R.3
-
41
-
-
33747669514
-
Fine mapping of a grain weight quantitative trait locus on rice chromosome 8 using near isogenic lines derived from a cross between Oryza sativa and O. rufipogon
-
Xie X., Song M.H., Jin F., Suh J.P., McCouch S.R., and Ahn S.N. Fine mapping of a grain weight quantitative trait locus on rice chromosome 8 using near isogenic lines derived from a cross between Oryza sativa and O. rufipogon. Genetics 113 (2006) 885-894
-
(2006)
Genetics
, vol.113
, pp. 885-894
-
-
Xie, X.1
Song, M.H.2
Jin, F.3
Suh, J.P.4
McCouch, S.R.5
Ahn, S.N.6
-
42
-
-
0029856798
-
Genes from wild rice improve yield
-
Xiao J.H., Grandillo S., Ahn S.N., McCouch S.R., Tanksley S.D., Li J.M., and Yuan L.P. Genes from wild rice improve yield. Nature 384 (1996) 223-224
-
(1996)
Nature
, vol.384
, pp. 223-224
-
-
Xiao, J.H.1
Grandillo, S.2
Ahn, S.N.3
McCouch, S.R.4
Tanksley, S.D.5
Li, J.M.6
Yuan, L.P.7
-
43
-
-
0031660783
-
Identification of trait-improving quantitative trait loci alleles from a wild rice relative Oryza rufipogon
-
Xiao J.H., Li J.M., Grandillo S., Ahn S.N., Yuan L.P., Tanksley S.D., and McCouch S.R. Identification of trait-improving quantitative trait loci alleles from a wild rice relative Oryza rufipogon. Genetics 150 (1998) 899-909
-
(1998)
Genetics
, vol.150
, pp. 899-909
-
-
Xiao, J.H.1
Li, J.M.2
Grandillo, S.3
Ahn, S.N.4
Yuan, L.P.5
Tanksley, S.D.6
McCouch, S.R.7
-
44
-
-
0035127873
-
Quantitative trait loci for yield and yield components in an Oryza sativa × Oryza rufipogon BC2F2 population evaluated in an upland environment
-
Moncada M., Martínez C., Tohme J., Guimaraes E., Chatel M., Borrero J., Gauch H., and McCouch S. Quantitative trait loci for yield and yield components in an Oryza sativa × Oryza rufipogon BC2F2 population evaluated in an upland environment. Theor Appl Genet 102 (2001) 41-52
-
(2001)
Theor Appl Genet
, vol.102
, pp. 41-52
-
-
Moncada, M.1
Martínez, C.2
Tohme, J.3
Guimaraes, E.4
Chatel, M.5
Borrero, J.6
Gauch, H.7
McCouch, S.8
-
45
-
-
0036760842
-
Identification and mapping of genes for improving yield from Chinese common wild rice (O. rufipogon Griff.) using advanced backcross QTL analysis
-
Li D., Sun C., Fu Y., Li C., Zhu Z., Chen L., Cai H., and Wang X. Identification and mapping of genes for improving yield from Chinese common wild rice (O. rufipogon Griff.) using advanced backcross QTL analysis. Chin Sci Bull 18 (2002) 1533-1537
-
(2002)
Chin Sci Bull
, vol.18
, pp. 1533-1537
-
-
Li, D.1
Sun, C.2
Fu, Y.3
Li, C.4
Zhu, Z.5
Chen, L.6
Cai, H.7
Wang, X.8
-
46
-
-
0344005444
-
Identification of quantitative trait loci for yield and yield components in an advanced backcross population derived from the Oryza sativa variety IR64 and the wild relative O. rufipogon
-
Septiningsih E.M., Prasetiyono J., Lubis E., Tai T.H., Tjubaryat T., Moeljopawiro S., and McCouch S.R. Identification of quantitative trait loci for yield and yield components in an advanced backcross population derived from the Oryza sativa variety IR64 and the wild relative O. rufipogon. Theor Appl Genet 107 (2003) 1419-1432
-
(2003)
Theor Appl Genet
, vol.107
, pp. 1419-1432
-
-
Septiningsih, E.M.1
Prasetiyono, J.2
Lubis, E.3
Tai, T.H.4
Tjubaryat, T.5
Moeljopawiro, S.6
McCouch, S.R.7
-
47
-
-
0041473833
-
Mapping quantitative trait loci for yield, yield components, and morphological traits in an advanced backcross population between Oryza rufipogon and the Oryza sativa cultivar Jefferson
-
Thomson M.J., Tai T.H., McClung A.M., Hinga M.E., Lobos K.B., Xu Y., Martinez C., and McCouch S.R. Mapping quantitative trait loci for yield, yield components, and morphological traits in an advanced backcross population between Oryza rufipogon and the Oryza sativa cultivar Jefferson. Theor Appl Genet 107 (2003) 479-493
-
(2003)
Theor Appl Genet
, vol.107
, pp. 479-493
-
-
Thomson, M.J.1
Tai, T.H.2
McClung, A.M.3
Hinga, M.E.4
Lobos, K.B.5
Xu, Y.6
Martinez, C.7
McCouch, S.R.8
-
48
-
-
34248632501
-
Identification and mapping of yield and yield related QTLs from an Indian accession of Oryza rufipogon
-
10.1186/1471-2156-1186-1133. An Indian accession of O. rufipogon was used in an advanced backcross QTL analysis to identify QTL related to yield and yield components. Thirty-nine QTL were found for the 13 agronomic traits measured, with 74% of the O. rufipogon alleles having a positive effect in the indica genetic background.
-
Marri P.R., Sarla N., Reddy L.V., and Siddiq E.A. Identification and mapping of yield and yield related QTLs from an Indian accession of Oryza rufipogon. BMC Genet UK 6 (2005) 33 10.1186/1471-2156-1186-1133. An Indian accession of O. rufipogon was used in an advanced backcross QTL analysis to identify QTL related to yield and yield components. Thirty-nine QTL were found for the 13 agronomic traits measured, with 74% of the O. rufipogon alleles having a positive effect in the indica genetic background.
-
(2005)
BMC Genet UK
, vol.6
, pp. 33
-
-
Marri, P.R.1
Sarla, N.2
Reddy, L.V.3
Siddiq, E.A.4
-
49
-
-
33745162934
-
Haplotype variation in structure and expression of a gene cluster associated with a quantitative trait locus for improved yield in rice
-
Near isogenic lines were used to fine map a previously reported QTL for yield in rice to a ∼100 kb region on chromosome 2. A leucine-rich repeat kinase gene cluster was found to have extensive allelic variation in both structure and expression, suggesting this cluster is a good candidate for the yield QTL. Interestingly, the recurrent parent for this study was an indica accession while the O. rufipogon accession contributing the positive effect on yield was a japonica-like sample collected from eastern China.
-
He G., Luo X., Tian F., Li K., Zhu Z., Su W., Qian X., Fu Y., Wang X., Sun C., et al. Haplotype variation in structure and expression of a gene cluster associated with a quantitative trait locus for improved yield in rice. Genome Res 16 (2006) 618-626. Near isogenic lines were used to fine map a previously reported QTL for yield in rice to a ∼100 kb region on chromosome 2. A leucine-rich repeat kinase gene cluster was found to have extensive allelic variation in both structure and expression, suggesting this cluster is a good candidate for the yield QTL. Interestingly, the recurrent parent for this study was an indica accession while the O. rufipogon accession contributing the positive effect on yield was a japonica-like sample collected from eastern China.
-
(2006)
Genome Res
, vol.16
, pp. 618-626
-
-
He, G.1
Luo, X.2
Tian, F.3
Li, K.4
Zhu, Z.5
Su, W.6
Qian, X.7
Fu, Y.8
Wang, X.9
Sun, C.10
-
50
-
-
33746470707
-
Fine mapping of a quantitative trait locus for grain number per panicle from wild rice (Oryza rufipogon Griff.)
-
Tian F., Zhu Z., Zhang B., Tan L., Fu Y., Wang X., and Sun C. Fine mapping of a quantitative trait locus for grain number per panicle from wild rice (Oryza rufipogon Griff.). Theor Appl Genet 113 (2006) 619-629
-
(2006)
Theor Appl Genet
, vol.113
, pp. 619-629
-
-
Tian, F.1
Zhu, Z.2
Zhang, B.3
Tan, L.4
Fu, Y.5
Wang, X.6
Sun, C.7
-
51
-
-
0344436676
-
Identification of quantitative trait loci for grain quality in an advanced backcross population derived from the Oryza sativa variety IR64 and the wild relative O. rufipogon
-
Septiningsih E.M., Trijatmiko K.R., Moeljopawiro S., and McCouch S.R. Identification of quantitative trait loci for grain quality in an advanced backcross population derived from the Oryza sativa variety IR64 and the wild relative O. rufipogon. Theor Appl Genet 107 (2003) 1433-1441
-
(2003)
Theor Appl Genet
, vol.107
, pp. 1433-1441
-
-
Septiningsih, E.M.1
Trijatmiko, K.R.2
Moeljopawiro, S.3
McCouch, S.R.4
-
52
-
-
33749845940
-
Identification and mapping of quantitative trait loci controlling cold-tolerance of Chinese common wild rice (O. rufipogon Griff.) at booting to flowering stages
-
Liu F., Sun C., Tan L., Fu Y., Li D., and Wang X. Identification and mapping of quantitative trait loci controlling cold-tolerance of Chinese common wild rice (O. rufipogon Griff.) at booting to flowering stages. Chin Sci Bull 48 (2003) 2068-2071
-
(2003)
Chin Sci Bull
, vol.48
, pp. 2068-2071
-
-
Liu, F.1
Sun, C.2
Tan, L.3
Fu, Y.4
Li, D.5
Wang, X.6
-
53
-
-
0037854790
-
Identification and mapping of the QTL for aluminum tolerance introgressed from the new source, Oryza rufipogon Griff., into indica rice (Oryza sativa L.)
-
Nguyen B.D., Brar D.S., Bui B.C., Nguyen T.V., Pham L.N., and Nguyen H.T. Identification and mapping of the QTL for aluminum tolerance introgressed from the new source, Oryza rufipogon Griff., into indica rice (Oryza sativa L.). Theor Appl Genet 106 (2003) 583-593
-
(2003)
Theor Appl Genet
, vol.106
, pp. 583-593
-
-
Nguyen, B.D.1
Brar, D.S.2
Bui, B.C.3
Nguyen, T.V.4
Pham, L.N.5
Nguyen, H.T.6
-
54
-
-
33646174055
-
Substitution mapping of dth1.1,a flowering time QTL associated with transgressive variation in rice, reveals a cluster of QTLs
-
Thomson M.J., Edwards J.D., Septiningsih E.M., Harrington S., and McCouch S.R. Substitution mapping of dth1.1,a flowering time QTL associated with transgressive variation in rice, reveals a cluster of QTLs. Genetics 172 (2006) 2501-2514
-
(2006)
Genetics
, vol.172
, pp. 2501-2514
-
-
Thomson, M.J.1
Edwards, J.D.2
Septiningsih, E.M.3
Harrington, S.4
McCouch, S.R.5
-
55
-
-
4344602945
-
QTL mapping of grain quality traits from the interspecific cross Oryza sativa × O. glaberrima
-
Aluko G., Martinez C., Tohme J., Castano C., Bergman C., and Oard J. QTL mapping of grain quality traits from the interspecific cross Oryza sativa × O. glaberrima. Theor Appl Genet 109 (2004) 630-639
-
(2004)
Theor Appl Genet
, vol.109
, pp. 630-639
-
-
Aluko, G.1
Martinez, C.2
Tohme, J.3
Castano, C.4
Bergman, C.5
Oard, J.6
-
56
-
-
5144230737
-
QTL detection for rice grain quality traits using an interspecific backcross population derived from cultivated Asian (O. sativa L.) and African (O. glaberrima S.) rice
-
Li J., Jinhua Xiao, Silvana Grandillo, Longying Jiang, Yizhen Wan, Qiyun Deng, Longping Yuan, and Susan McCouch. QTL detection for rice grain quality traits using an interspecific backcross population derived from cultivated Asian (O. sativa L.) and African (O. glaberrima S.) rice. Genome 47 (2004) 697-704
-
(2004)
Genome
, vol.47
, pp. 697-704
-
-
Li, J.1
Jinhua Xiao2
Silvana Grandillo3
Longying Jiang4
Yizhen Wan5
Qiyun Deng6
Longping Yuan7
Susan McCouch8
-
57
-
-
31644434679
-
Oryza glaberrima: a source for the improvement of Oryza sativa
-
Sarla N., and Swamy B.P. Oryza glaberrima: a source for the improvement of Oryza sativa. Curr Sci 89 (2005) 955-963
-
(2005)
Curr Sci
, vol.89
, pp. 955-963
-
-
Sarla, N.1
Swamy, B.P.2
-
58
-
-
0036955225
-
QTL mapping and introgression of yield-related traits from Oryza glumaepatula to cultivated rice (Oryza sativa) using microsatellite markers
-
Brondani C., Rangel N., Brondani V., and Ferreira E. QTL mapping and introgression of yield-related traits from Oryza glumaepatula to cultivated rice (Oryza sativa) using microsatellite markers. Theor Appl Genet 104 (2002) 1192-1203
-
(2002)
Theor Appl Genet
, vol.104
, pp. 1192-1203
-
-
Brondani, C.1
Rangel, N.2
Brondani, V.3
Ferreira, E.4
-
59
-
-
33748710772
-
Development of rice lines with gene introgression from the wild Oryza glumaepatula by the AB-QTL methodology
-
Rangel P.H.N., Brondani C., Rangel P.N., Brondani R.P.V., and Zimmermann F.J.P. Development of rice lines with gene introgression from the wild Oryza glumaepatula by the AB-QTL methodology. Crop Breed Appl Biotech 5 (2005) 10-19
-
(2005)
Crop Breed Appl Biotech
, vol.5
, pp. 10-19
-
-
Rangel, P.H.N.1
Brondani, C.2
Rangel, P.N.3
Brondani, R.P.V.4
Zimmermann, F.J.P.5
-
60
-
-
0001171660
-
High soluble-solids content in large-fruited tomato lines derived from a wild green-fruited species
-
Rick C.M. High soluble-solids content in large-fruited tomato lines derived from a wild green-fruited species. Hilgarida 42 (1974) 493-510
-
(1974)
Hilgarida
, vol.42
, pp. 493-510
-
-
Rick, C.M.1
-
61
-
-
3343010420
-
Improving cultivated oats (A vena sativa L.) with alleles for vegetative growth index from A. sterilis L.
-
Cox D.J., and Frey K.J. Improving cultivated oats (A vena sativa L.) with alleles for vegetative growth index from A. sterilis L. Theor Appl Genet 68 (1984) 239-245
-
(1984)
Theor Appl Genet
, vol.68
, pp. 239-245
-
-
Cox, D.J.1
Frey, K.J.2
-
62
-
-
0027230981
-
QTL analysis of transgressive segregation in an interspecific tomato cross
-
deVicente M.C., and Tanksley S.D. QTL analysis of transgressive segregation in an interspecific tomato cross. Genetics 134 (1993) 585-596
-
(1993)
Genetics
, vol.134
, pp. 585-596
-
-
deVicente, M.C.1
Tanksley, S.D.2
-
63
-
-
0028846653
-
An introgression line population of Lycopersicon pennellii in the cultivated tomato enables the identification and fine mapping of yield-associated QTL
-
Eshed Y., and Zamir D. An introgression line population of Lycopersicon pennellii in the cultivated tomato enables the identification and fine mapping of yield-associated QTL. Genetics 141 (1995) 1147-1162
-
(1995)
Genetics
, vol.141
, pp. 1147-1162
-
-
Eshed, Y.1
Zamir, D.2
-
64
-
-
0032755574
-
Transgressive segregation, adaptation and speciation
-
Rieseberg L.H., Archer M.A., and Wayne R.K. Transgressive segregation, adaptation and speciation. Heredity 83 (1999) 363-372
-
(1999)
Heredity
, vol.83
, pp. 363-372
-
-
Rieseberg, L.H.1
Archer, M.A.2
Wayne, R.K.3
-
65
-
-
0012941651
-
Mapping of yield-related QTLs in pepper in an interspecific cross of Capisicum annum and C. frutescens
-
Rao G.U., Ben Chaim A., Borovsky Y., and Paran I. Mapping of yield-related QTLs in pepper in an interspecific cross of Capisicum annum and C. frutescens. Theor Appl Genet 106 (2003) 1457-1466
-
(2003)
Theor Appl Genet
, vol.106
, pp. 1457-1466
-
-
Rao, G.U.1
Ben Chaim, A.2
Borovsky, Y.3
Paran, I.4
-
66
-
-
12344293694
-
QTL analysis of cotton fiber quality using multiple Gossypium hirsutum × Gossypium barbadense backcross generations
-
Lacape J.M., Nguyen T.B., Courtois B., Belot J.L., Giband M., Gourlot J.P., Gawryziak G., Roques S., and Hau B. QTL analysis of cotton fiber quality using multiple Gossypium hirsutum × Gossypium barbadense backcross generations. Crop Sci 45 (2005) 123-140
-
(2005)
Crop Sci
, vol.45
, pp. 123-140
-
-
Lacape, J.M.1
Nguyen, T.B.2
Courtois, B.3
Belot, J.L.4
Giband, M.5
Gourlot, J.P.6
Gawryziak, G.7
Roques, S.8
Hau, B.9
-
67
-
-
35348957912
-
QTL mapping of domestication-related traits in soybean (Glycine max)
-
10.1093/annbot/mcm149
-
Liu B., Fujita T., Yan Z.-H., Sakamoto S., Xu D., and Abe J. QTL mapping of domestication-related traits in soybean (Glycine max). Ann Bot (2007) 1-12 10.1093/annbot/mcm149
-
(2007)
Ann Bot
, pp. 1-12
-
-
Liu, B.1
Fujita, T.2
Yan, Z.-H.3
Sakamoto, S.4
Xu, D.5
Abe, J.6
-
68
-
-
0033392770
-
Post-green revolution trends in yield potential of temperate maize in the North-Central United States
-
Duvick D.N., and Cassman K.G. Post-green revolution trends in yield potential of temperate maize in the North-Central United States. Crop Sci 39 (1999) 1622-1630
-
(1999)
Crop Sci
, vol.39
, pp. 1622-1630
-
-
Duvick, D.N.1
Cassman, K.G.2
-
69
-
-
0002813202
-
Feeding people and protecting natural resources
-
Coors J.G., and Pandey S. (Eds), Crop Science Society of America and Soil Science Society of America
-
Duvick D.N. Feeding people and protecting natural resources. In: Coors J.G., and Pandey S. (Eds). The Genetics and Exploitation of Heterosis in Crops (1999), Crop Science Society of America and Soil Science Society of America 19-29
-
(1999)
The Genetics and Exploitation of Heterosis in Crops
, pp. 19-29
-
-
Duvick, D.N.1
-
70
-
-
33645020712
-
The contribution of breeding to yield advances in maize (Zea mays L.)
-
Duvick D.N. The contribution of breeding to yield advances in maize (Zea mays L.). Advan Agron 86 (2005) 83-145
-
(2005)
Advan Agron
, vol.86
, pp. 83-145
-
-
Duvick, D.N.1
-
71
-
-
27444448064
-
Advances in hybrid rice research and development in the tropics
-
Virmani S.S., Mao C.X., and Hardy B. (Eds). International Rice Research Institute
-
Virmani S.S., and Kumar I. Advances in hybrid rice research and development in the tropics. In: Virmani S.S., Mao C.X., and Hardy B. (Eds). Proceedings of the 4th International Symposium on Hybrid Rice June 2004, Los Banos (Philippines). International Rice Research Institute (2002) 10-20
-
(2002)
Proceedings of the 4th International Symposium on Hybrid Rice June 2004, Los Banos (Philippines)
, pp. 10-20
-
-
Virmani, S.S.1
Kumar, I.2
-
72
-
-
0029035408
-
Dominance is the major genetic basis of heterosis in rice as revealed by QTL analysis using molecular markers
-
Xiao J., Li J., Yuan L., and Tanksley S.D. Dominance is the major genetic basis of heterosis in rice as revealed by QTL analysis using molecular markers. Genetics 140 (1995) 745-754
-
(1995)
Genetics
, vol.140
, pp. 745-754
-
-
Xiao, J.1
Li, J.2
Yuan, L.3
Tanksley, S.D.4
-
73
-
-
0036963688
-
Genetic dissection of an elite rice hybrid revealed that heterozygotes are not always advantageous for performance
-
Hua J.P., Xing Y.Z., Xu C.G., Sun X.L., Yu S.B., and Zhang Q. Genetic dissection of an elite rice hybrid revealed that heterozygotes are not always advantageous for performance. Genetics 162 (2002) 1885-1895
-
(2002)
Genetics
, vol.162
, pp. 1885-1895
-
-
Hua, J.P.1
Xing, Y.Z.2
Xu, C.G.3
Sun, X.L.4
Yu, S.B.5
Zhang, Q.6
-
74
-
-
0036927814
-
Genetic differentiation for nuclear mitochondrial and chloroplast genomes in common wild rice (O. rufipogon Griff) and cultivated rice (O. sativa L)
-
Sun C., Wang X., Yoshimura A., and Doi K. Genetic differentiation for nuclear mitochondrial and chloroplast genomes in common wild rice (O. rufipogon Griff) and cultivated rice (O. sativa L). Theor Appl Genet 104 (2002) 1335-1345
-
(2002)
Theor Appl Genet
, vol.104
, pp. 1335-1345
-
-
Sun, C.1
Wang, X.2
Yoshimura, A.3
Doi, K.4
-
75
-
-
32544442297
-
Genetic eroison from modern varieties into traditional upland rice cultivars
-
Ishikawa R., Yamanaka S., Fukuta Y., Chitrakon S., Bounphanousay C., Kanyavong K., Tang L., Nakamura I., Sato T., and Sato Y.I. Genetic eroison from modern varieties into traditional upland rice cultivars. Genet Res Crop Evol 53 (2006) 245-252
-
(2006)
Genet Res Crop Evol
, vol.53
, pp. 245-252
-
-
Ishikawa, R.1
Yamanaka, S.2
Fukuta, Y.3
Chitrakon, S.4
Bounphanousay, C.5
Kanyavong, K.6
Tang, L.7
Nakamura, I.8
Sato, T.9
Sato, Y.I.10
-
76
-
-
27644497087
-
Gene-to-phenotype models and complex trait genetics
-
Cooper M., Podlich D.W., and Smith O.S. Gene-to-phenotype models and complex trait genetics. Aus J Ag Res 56 (2005) 895-918
-
(2005)
Aus J Ag Res
, vol.56
, pp. 895-918
-
-
Cooper, M.1
Podlich, D.W.2
Smith, O.S.3
-
77
-
-
33751231153
-
Hybrid rice achievements and development in China
-
Virmani S.S., Mao C.X., and Hardy B. (Eds). International Rice Research Institute
-
Ma G., and Yuan L. Hybrid rice achievements and development in China. In: Virmani S.S., Mao C.X., and Hardy B. (Eds). Proceedings of the 4th International Symposium on Hybrid Rice June 2004, Los Banos (Philippines). International Rice Research Institute (2002) 247-257
-
(2002)
Proceedings of the 4th International Symposium on Hybrid Rice June 2004, Los Banos (Philippines)
, pp. 247-257
-
-
Ma, G.1
Yuan, L.2
|