Morphological and molecular characterization of Humaria and Genea ectomycorrhizae from Hungarian deciduous forests

Mycorrhiza

Volumn 18, Issue 3, 2008, Pages 133-143

  Erős Honti, Zsolt ^a   Kovács, Gábor M ^a   Szedlay, Gyöngyi ^a   Jakucs, Erzsébet ^a  

^a EÖTVÖS LORÁND UNIVERSITY   (Hungary)

Author keywords

Anatomy; Ectomycorrhiza; Genea; Humaria; Morphometry; Phylogenetic analysis

Indexed keywords

ANATOMY; DATABASE; DECIDUOUS FOREST; ECTOMYCORRHIZA; IDENTIFICATION METHOD; MOLECULAR ANALYSIS; MORPHOLOGY; MORPHOMETRY; MORPHOTYPE; PHYLOGENETICS; TAXONOMY;

CENTRAL EUROPE; EURASIA; EUROPE; HUNGARY;

ASCOMYCOTA; FUNGI; GENEA; HUMARIA; HUMARIA HEMISPHAERICA; PYRONEMATACEAE;

EID: 41049084426     PISSN: 09406360     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00572-008-0164-7     Document Type: Article

References (59)

1. Agerer R (1991) Characterization of ectomycorrhiza. In: Norris JR, Read DJ, Varma AK (eds) Techniques for mycorrhizal research, vol. 23. Academic, San Diego, pp 25-73
2. Agerer R (2006) Fungal relationships and structural identity of their ectomycorrhizae. Mycol Prog 5:67-107
3. Akaike H (1974) A new look at the statistical model identification. IEEE Trans Automat Contrl 19(6):716-723
4. Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ (1990) Basic local alignment search tool. J Mol Biol 215:403-410
5. Boxman AW, Blanck K, Brandrud T-E, Emmett BA, Gundersen P, Hogervorst RF, Kjonaas OJ, Persson H, Timmermann V (1998) Vegetation and soil biota response to experimentally-changed nitrogen inputs in coniferous forest ecosystems of the NITREX project. Forest Ecol Manag 101:65-79
6. Brand F (1991) Ektomykorrhizen an Fagus sylvatica. Charakterisierung und Identifizierung, ökologische Kennzeichnung and unsterile Kultivierung. IHW, Berlin
7. Brand F, Agerer R (1986) Studien an Ektomykorrhizen. VIII. Die Mykorrhizen von Lactarius subdulcis, Lactarius vellereus und Lactarius amethystina an Buche. Z Mykol 52:287-320
8. Brandrud TE, Timmermann V (1998) Ectomycorrhizal fungi in the NITREX site at Gjårdsjön, Sweden; below and above-ground responses to experimentally-changed nitrogen inputs 1990-1995. Forest Ecol Manag 101:207-214
9. Danielson RM (1982) Taxonomic affinities and criteria for identification of the common ectendomycorrhizal symbiont of pines. Can J Bot 60:7-18
10. Danielson RM (1984) Ectomycorrhiza formation by the operculate discomycete Sphaerosphorella brunnea (Pezizales). Mycologia 76(3):454-461
11. Egger KN (1996) Molecular systematics of E-strain mycorrhizal fungi: Wilcoxina and its relationship to Tricharina (Pezizales). Can J Bot 74:773-779
12. Egger KN, Paden JW (1986) Biotrophic associations between lodgepole pine seedlings and post-fire ascomycetes (Pezizales) in monoxenic culture. Can J Bot 64:2719-2725
13. Egli S, Ayer F, Peter M, Schneider B (2001) Arcangeliella borziana Cavara + Picea abies (L.) Karst. Descr Ectomyc 5:9-14
14. Fay DA, Mitchell DT (1999) A preliminary study of the mycorrhizal associations of tree seedlings growing on mine spoil at Avoca, Co. Wicklow. Biol Environ 99B:19-26
15. Felsenstein J (1985) Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783-791
16. Filatov DA (2002) ProSeq: a software for preparation and evolutionary analysis of DANN sequence data sets. Mol Ecol Notes 2:621-624
17. Fujimura KE, Smith JE, Horton TR, Weber NS, Spatafora JW (2005) Pezizalean mycorrhizas and sporocarps in ponderosa pine (Pinus ponderosa) after prescribed fires in eastern Oregon, USA. Mycorrhiza 15:79-86
18. Gardes M, Bruns TD (1993) ITS primers with enhanced specificity for basidiomycetes-application to the identification of mycorrhizae and rusts. Mol Ecol 2:113-118
19. Gardes M, Bruns TD (1996) Community structure of ectomycorrhizal fungi in a Pinus muricata forest: above- and below-ground views. Can J Bot 74(10):1572-1583
20. Horton TR, Bruns TD (2001) The molecular revolution in ectomycorrhizal ecology: peeking into the black-box. Mol Ecol 10(8):1855-1871
21. Huelsenbeck JP, Ronquist F (2001) MRBAYES: Bayesian inference of phylogeny. Bioinformatics 17:754-755
22. Ingleby K, Masson PA, Last FT, Fleming LV (1990) Identification of ectomycorrhizas. HMSO, London
23. Ingleby K, Munro RC, Noor M, Mason PA, Clearwater MJ (1998) Ectomycorrhizal populations and growth of Shorea parvifolia (Dipterocarpaceae) seedlings regenerating under three different forest canopies following logging. Forest Ecol Manag 111(2):171-179
24. Izzo AD, Meyer M, Trappe JM, North M, Bruns TD (2005) Hypogeous ectomycorrhizal fungal species on roots and in small mammal diet in a mixed-conifer forest. Forest Sci 51(3):243-254
25. Jakucs E (2002) Ectomycorrhizae of Populus alba L. in South Hungary. Phyton 42:199-210
26. Jakucs E, Bratek Z, Agerer R (1998) Genea verrucosa Vitt. + Quercus spec. Descr Ectomyc 3:19-23
27. Jakucs E, Kovács GM, Szedlay G, Eros-Honti Z (2005) Morphological and molecular diversity and abundance of tomentelloid ectomycorrhizae in broad-leaved forests of the Hungarian Plain. Mycorrhiza 15:459-70
28. Köljalg U, Larsson K-H, Abarenkov K, Nilsson RH, Alexander IJ, Eberhardt U, Erland S, Hoiland K, Kjoller R, Larsson E, Pennanen T, Sen R, Taylor AFS, Tedersoo L, Vralstad T, Ursing BM (2005) UNITE: a database providing web-based methods for the molecular identification of ectomycorrhizal fungi. New Phytol 166:1063-1068
29. Kovács GM, Jakucs E (2006) Morphological and molecular comparison of white truffle ectomycorrhizae. Mycorrhiza 16:567-574
30. Kovács GM, Szigetvári C (2002) Mycorrhizae and other root-associated fungal structures of the plants of a sandy grassland on the Great Hungarian Plain. Phyton 42(2):211-223
31. Kumar S, Tamura K, Nei M (2004) MEGA 3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinform 5:150-163
32. Laiho O, Mikola P (1964) Studies on the effect of some eradicants on mycorrhizal development in forest nurseries. Act For Fenn 77:1-33
33. Lee SL, Alexander IJ, Watling R (1997) Ectomycorrhizas and putative ectomycorrhizal fungi of Shorea leprosula Miq. (Dipterocarpaceae). Mycorrhiza 7:63-81
34. Maia LC, Yano AM, Kimbrough JW (1996) Species of Ascomycota forming ectomycorrhizae. Mycotaxon 57:371-390
35. Mosca E, Montecchio L, Sella L, Garbaye J (2007) Short-term effect of removing tree competition on the ectomycorrhizal status of a declining pedunculate oak forest (Quercus robur L.). Forest Ecol Manag 244(1-3):129-140
36. Nilsson RH, Larsson K-H, Ursing BM (2004) Galaxie-CGI scripts for sequence identification through automated phylogenetic analysis. Bioinformatics 20:1447-1452
37. Page RDM (1996) TREEVIEW: an application to display phylogenetic trees on personal computers. Comput Appl Biosci 12:357-358
38. Perry BA, Hansen K, Pfister DH (2007) A phylogenetic overview of the family Pyronemataceae (Ascomycota, Pezizales). Mycol Res 111:549-571
39. Posada D, Crandall KA (1998) MODELTEST: testing the model of DNA substitution. Bioinformatics 14:817-818
40. Richard F, Moreau PA, Selosse MA, Gardes M (2004) Diversity and fruiting patterns of ectomycorrhizal and saprobic fungi in an old-growth Mediterranean forest dominated by Quercus ilex L. Can J Bot 82:1711-1729
41. Ronquist F, Huelsenbeck JP (2003) MRBAYES 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19:1572-1574
42. Rudawska M, Leski T, Trocha LK, Gornowicz R (2006) Ectomycorrhizal status of Norway spruce seedlings from bare-root forest nurseries. Forest Ecol Manag 236:375-384
43. Rumberger MD, Münzenberger B, Bens O, Ehrig F, Lentzsch P, Hüttl RF (2004) Changes in diversity and storage function of ectomycorrhiza and soil organoprofile dynamics after introduction of beech into Scots pine forests. Plant Soil 264:111-126
44. Salerni E, Laganà A, De Dominicis V (2001) Mycocoenological studies in deciduous oak woods of central-southern Tuscany (Italy). Cryptogamie Mycol 22(1):35-55
45. Scales PF, Peterson RL (1991a) Structure and development of Pinus banksiana-Wilcoxina ectendomycorrhizae. Can J Bot 69:2135-2148
46. Scales PF, Peterson RL (1991b) Structure of ectomycorrhizae formed by Wilcoxina mikolae var. mikolae with Picea mariana and Betula alleghaniensis. Can J Bot 69:2149-2157
47. Sesli E (1998) Four interesting records of Pezizales of the macrofungal flora of Turkey. Tr J Bot 22:289-293
48. Smith ME, Trappe JM, Rizzo DM (2006) Genea, Genabea and Gilkeya gen. nov.: ascomata and ectomycorrhiza formation in a Quercus woodland. Mycologia 98(5):699-716
49. Staden R, Beal KF, Bonfield JK (2000) The Staden package, 1998. Methods Mol Biol 132:115-130
50. Swofford DL (2003) PAUP*. Phylogenetic analysis using parsimony (*and other methods). Version 4. Sinauer Associates, Sunderland, Massachusetts
51. Tavaré S (1986) Some probabilistic and statistical problems in the analysis of DNA sequences. Lect Math Life Sci 17:57-86
52. Tedersoo L, Hansen K, Perry BA, Kjøller R (2006a) Molecular and morphological diversity of pezizalean ectomycorrhiza. New Phytol 170:581-596
53. Tedersoo L, Suvi T, Larsson E, Kõljalg U (2006b) Diversity and community structure of ectomycorrhizal fungi in a wooded meadow. Mycol Res 110(6):734-748
54. Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997) The ClustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucl Acid Res 24:4876-4882
55. Valentine LL, Fiedler TL, Hart AN, Petersen CA, Berninghausen HK, Southworth D (2004) Diversity of ectomycorrhizas associated with Quercus garryana in southern Oregon. Can J Bot 82:123-135
56. Welch BL (1947) The generalization of "student's" problem when several different population variances are involved. Biometrika 34:28-35
57. White TJ, Bruns T, Lee S, Taylor J (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ (eds) PCR Protocols: a guide to methods and applications. Academic, New York, pp 315-322
58. Wilcox HE (1983) Fungal parasitism of woody plant roots from mycorrhizal relationships to plant disease. Ann Rev Phytopathol 21:221-242
59. Yu TEJ-C, Egger KN, Peterson RL (2001) Ectendomycorrhizal associations-characteristics and functions. Mycorrhiza 11:167-177