Spectral discrimination of phytoplankton colour groups: The effect of suspended particulate matter and sensor spectral resolution

Remote Sensing of Environment

Volumn 112, Issue 4, 2008, Pages 1527-1544

  Hunter, Peter D ^a   Tyler, Andrew N ^a   Présing, Mátyás ^b   Kovács, Attila W ^b   Preston, Tom ^c  

^a UNIVERSITY OF STIRLING   (United Kingdom)

^b BALATON LIMNOLOGICAL RESEARCH INSTITUTE   (Hungary)

^c SCOTTISH UNIVERSITIES ENVIRONMENTAL RESEARCH CENTRE   (United Kingdom)

Author keywords

Lakes; Phytoplankton; Pigments; Remote sensing; Spectrometry

Indexed keywords

BIOMARKERS; CHLOROPHYLL; PARTICLES (PARTICULATE MATTER); REMOTE SENSING; SPECTRAL RESOLUTION; WATER RESOURCES;

CO-DOMINANT SPECIES; INLAND WATERS; SENSOR SPECTRAL RESOLUTION;

PHYTOPLANKTON;

BIOMARKER; CHLOROPHYLL A; COMMUNITY COMPOSITION; LAKE WATER; PHYTOPLANKTON; REMOTE SENSING; SPECTRAL RESOLUTION; SPECTROMETRY; SUSPENDED PARTICULATE MATTER; TAXONOMY;

RHODOPHYTA;

EID: 40949092703     PISSN: 00344257     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.rse.2007.08.003     Document Type: Article

References (50)

1. Aguirre-Gómez R., Weeks A.R., and Boxall S.R. The identification of phytoplankton pigments from absorption spectra. International Journal of Remote Sensing 22 2-3 (2001) 315-338
2. Aguirre-Gómez R., Boxall S.R., and Weeks. Detecting photosynthetic algal pigments in natural populations using a high-spectral-resolution radiometer. International Journal of Remote Sensing 22 15 (2001) 2867-2884
3. Ahn Y.H., Bricaud A., and Morel A. Light backscattering efficiency and related properties of some phytoplankters. Deep-Sea Research 29 (1992) 1835-1855
4. Ammenberg P., Flink P., Lindell T., Pierson D., and Strombeck N. Bio-optical modelling combined with remote sensing to assess water quality. International Journal of Remote Sensing 23 8 (2001) 1621-1638
5. Barlow R.G., Cummings D.G., and Gibb S.W. Improved resolution of mono- and divinyl chlorophylls a and b and zeaxanthin and lutein in phytoplankton extracts using reverse phase C-8 HPLC. Marine Ecology. Progress Series 161 (1997) 303-307
6. Bennett A., and Bogorad L. Complementary chromatic adaptation in a filmentous blue-green alga. The Journal of Cell Biology 58 (1973) 419-435
7. Camps-Valls G., Gomez-Chova L., Munoz-Mari J., Vila-Frances J., Amoros-Lopez J., and Calpe-Maravilla J. Retrieval of oceanic chlorophyll concentration with relevance vector machines. Remote Sensing of Environment 105 1 (2006) 23-33
8. Codd G.A., Morrison L.F., and Metcalf J.S. Cyanobacterial toxins: risk management for health. Toxicology and Applied Pharmacology 203 3 (2005) 264-272
9. Dall'Olmo G., Gitelson A.A., and Rundquist D.C. Towards a unified approach for remote estimation of chlorophyll-a in both terrestrial vegetation and turbid productive waters. Geophysical Research Letters 30 18 (2003)
10. Dall'Olmo G., Gitelson A.A., Rundquist D.C., Leavitt B., Barrow T., and Holz J.C. Assessing the potential of SeaWiFS and MODIS for estimating chlorophyll concentrations in turbid productive waters using red and near-infrared bands. Remote Sensing of Environment 96 (2005) 176-187
11. Dekker, A.G. (1993). Detection of optical water quality parameters for eutrophic waters by high resolution remote sensing. PhD Thesis, Free University, Amsterdam.
12. Dekker A.G., Malthus T.J., Wijen M.M., and Seyhan E. The effect of spectral bandwidth and positioning on the spectral signature analysis of inland waters. Remote Sensing of Environment 41 (1992) 211-225
13. Dzwonkowski B., and Yan X.H. Development and application of a neural network based ocean colour algorithm in coastal waters. International Journal of Remote Sensing 18 (2005) 1961-1975
14. Elliot J.A., Thackeray S.J., Huntingford C., and Jones R.G. Combining a regional climate model with a phytoplankton community model to predict future changes in phytoplankton in lakes. Freshwater Biology 50 (2005) 1404-1411
15. Flink P., Lindell T., and Ostlund C. Statistical analysis of hyperspectral data from two Swedish lakes. The Science of the Total Environment 268 (2001) 155-169
16. Gege P. Characterization of the phytoplankton in Lake Constance for classification by remote sensing. In: Bäuerle E., and Gaedke U. (Eds). Lake Constance - Characterisation of an ecosystem in transition. Archiv für Hydriobiologie Vol. 53 (1998) 179-193
17. George D.G. The airborne remote sensing of phytoplankton chlorophyll in the lakes and tarns of the English Lake District. International Journal of Remote Sensing 18 9 (1997) 1961-1975
18. George D.G., and Malthus T.J. Using a compact airborne spectrographic imager to monitor phytoplankton biomass in a series of lakes in north Wales. The Science of the Total Environment 268 (2001) 215-226
19. Gitelson A.A., Schalles J.F., Rundquist D.C., Schiebe F.R., and Yosef Z. Comparative reflectance properties of algal cultures with manipulated densities. Journal of Applied Phycology 11 (1999) 345-354
20. Han L., and Rundquist D.C. Comparison of NIR/RED ratio and first derivative of reflectance in estimating algal-chlorophyll concentration: a case study in a turbid reservoir. Remote Sensing of Environment 62 (1997) 253-261
21. Herodek S., Laczbó L., and Virá Á. Lake Balaton: research and management. Nexus Nyomda Budapest (1988) 1-110
22. Hoogenboom H.J., Dekker A.G., and De Haan J.F. Retrieval of chlorophyll and suspended matter from imaging spectrometry data by matrix inversion. Canadian Journal of Remote Sensing 24 2 (1998) 144-152
23. Hunter, P. D. (2007). Remote Sensing in Shallow Lake Ecology. Unpublished PhD thesis, University of Stirling.
24. Iwamura T., Nagai H., and Ishimura S. Improved methods for determining the contents of chlorophyll, protein, ribonucleic and deoxyribonucleic acid in planktonic populations. Internationale Revue der gesamten Hydrobiologie 55 (1970) 131-147
25. Jeffrey S.W. Application of pigment methods to oceanography. In: Jeffrey S.W., Mantoura R.F.C., and Wright S.W. (Eds). Phytoplankton Pigments in Oceanography: Guidelines to Modern Methods (1997), UNESCO, Paris 127-178
26. Jeffrey S.W., and Wright S.W. Photosynthetic pigments in marine microalgae: Insights from cultures and the sea. In: Subba D.V. (Ed). Algal Cultures Analogues of Blooms and Applications (2006), Science Publishers, Plymouth, UK 33-90
27. Jupp D.L.B., Kirk J.T.O., and Harris G.P. Detection, identification and mapping of cyanobacteria-using remote sensing to measure the optical quality of turbid inland waters. Australian Journal of Marine and Freshwater Research 45 (1994) 801-828
28. Kutser T., Metsamaa L., Strömbeck N., and Vahtmäe E. Monitoring cyanobacterial blooms by satellite remote sensing. Estuarine, Coastal and Shelf Science 67 1-2 (2006) 303-312
29. Malthus T.J., and Dekker A.G. First derivative indices for the remote sensing of inland water quality using high spectral resolution reflectance. Environment International 21 2 (1995) 221-232
30. Mantoura R.F.C., and Llewellyn C.A. The rapid-determination of algal chlorophyll and carotenoid pigments and their breakdown products in natural-waters by reverse-phase high-performance liquid-chromatography. Anaytica Chimica Acta 151 2 (1983) 297-314
31. Meleder V., Barille L., Launeau P., Carrere V., and Rince Y. Spectrometric constraint in analysis of benthic diatom biomass using monospecific cultures. Remote Sensing of Environment 88 4 (2003) 386-400
32. Millie D.F., Schofield O.M.E., Kirkpatrick G.J., Johnsen G., and Evens T.J. Using absorbance and fluorescence spectra to discriminate microalage. European Journal of Phycology 37 (2002) 313-322
33. Mooij W.M., Hulsmann S., Domis L.N.D., Nolet B.A., Bodelier P.L.E., Boers P.C.M., et al. The impact of climate change on the lakes of the Netherlands: a review. Aquatic Ecology 39 4 (2005) 381-400
34. Ostlund C., Flink P., Strombeck N., Pierson D., and Lindell T. Mapping of the water quality of Lake Erkan, Sweden, from imaging spectrometry and Landsat Thematic Mapper. Science of the Total Environment 268 1-3 (2001) 139-154
35. Quibell G. The effect of suspended sediment on the reflectance from freshwater algae. International Journal of Remote Sensing 12 (1991) 177-182
36. Rippka R., Deruelles J., Waterbury B., Herdman M., and Stanier R.Y. Generic assignments, strain histories and properties of pure cultures of cyanobacteria. Journal of General Microbiology 111 (1979) 1-61
37. Rowan K.S. The photosynthetic pigments of algae (1989), Cambridge University Press, Melborne
38. Sarada R., Pillai M.G., and Ravishankar G.A. Phycocyanin from Spirulina sp: Influence of processing of biomass on phycocyanin yield, analysis of efficacy of extraction methods and stability studies on phycocyanin. Process Biochemistry 34 (1999) 795-801
39. Sathyendranath S., Stuart V., Platt T., Bouman H., Ulloa O., and Maass H. Remote sensing of ocean colour: Toward algorithms for retrieval of pigment composition. Indian Journal of Marine Sciences 34 4 (2005) 333-340
40. Sathyendranath S., Watts L., Devred E., Platt T., Caverhill C., and Maass H. Discrimination of diatoms from other phytoplankton using ocean colour data. Marine Ecology. Progress Series 272 (2004) 59-68
41. Schmid H., Bauer F., and Bernd Stich H. Determination of algal biomass with HPLC pigment analysis from lakes of different trophic state in comparison to microscopically measured biomass. Journal of Plankton Research 20 9 (1998) 1651-1661
42. Simis S.G.H., Peters S.W.M., and Gons H.J. Remote sensing of the cyanobacterial pigment phycocyanin in turbid inland water. Limnology and Oceanography 50 1 (2005) 237-245
43. Simis S.G.H., Ruiz-Verdu A., Dominguez-Gomez J.A., Pena-Martinez R., Peters S.W.M., and Gons H.J. Influence of phytoplankton pigment composition on remote sensing of cyanobacterial biomass. Remote Sensing of Environment 106 4 (2007) 414-427
44. Sváb E., Tyler A.N., Preston T., Présing M., and Balogh K.V. Characterising the spectral reflectance of algae in lake waters with high suspended sediment concentrations. International Journal of Remote Sensing 26 5 (2005) 919-928
45. Thiemann S., and Kaufmann H. Determination of chlorophyll content and trophic state of lakes using field spectrometer and IRS-1C satellite data in the Mecklenberg Lake District, Germany. Remote Sensing of Environment 73 (2000) 227-235
46. Tyler A.N., Sváb E., Preston T., Présing M., and Kovacs W.A. Remote sensing of the water quality of shallow lakes: A mixture modelling approach to quantifying phytoplankton in water characterised by high-suspended sediment. International Journal of Remote Sensing 27 8 (2006) 1521-1537
47. Vaillancourt R.D., Brown C.W., Guillard R.R.L., and Balch W.M. Light backscattering properties of marine phytoplankton: Relationships to cell size, chemical composition and taxonomy. Journal of Plankton Research 26 2 (2004) 191-212
48. Vincent R.K., Xiaoming Qin R., Mckay M.L., Miner J., Czajkowski K., Savino J., et al. Phycocyanin detection from LANDSAT TM data for mapping cyanobacterial blooms in Lake Erie. Remote Sensing of Environment 89 3 (2004) 381-392
49. Wright S.W., Jefferey S.W., Mantoura R.F.C., Llewellyn C.A., Bjørnland T., Repeta D., et al. Improved HPLC method for the analysis of chlorophylls and carotenoids from marine phytoplankton. Marine Ecology. Progress Series 77 (1991) 183-196
50. Zhan H.G., Shi P., and Chen C.Q. Retrieval of oceanic chlorophyll concentration using support vector machines. IEEE Transactions on Geoscience and Remote Sensing 41 12 (2003) 2947-2951