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Volumn 178, Issue 1, 2008, Pages 385-392

Empirical tests of the reliability of phylogenetic trees constructed with microsatellite DNA

Author keywords

[No Author keywords available]

Indexed keywords

MICROSATELLITE DNA;

EID: 40849142607     PISSN: 00166731     EISSN: 00166731     Source Type: Journal    
DOI: 10.1534/genetics.107.081505     Document Type: Article
Times cited : (89)

References (34)
  • 1
    • 0014082615 scopus 로고
    • Phylogenetic analysis. Models and estimation procedures
    • CAVALLI-SFORZA, L. L., and A. W. EDWARDS, 1967 Phylogenetic analysis. Models and estimation procedures. Am. J. Hum. Genet. 19: 233-257.
    • (1967) Am. J. Hum. Genet , vol.19 , pp. 233-257
    • CAVALLI-SFORZA, L.L.1    EDWARDS, A.W.2
  • 4
    • 0034079715 scopus 로고    scopus 로고
    • Heterogeneous mutation processes in human microsatellite DNA sequences
    • ELLEGREN, H., 2000 Heterogeneous mutation processes in human microsatellite DNA sequences. Nat. Genet. 24: 400-402.
    • (2000) Nat. Genet , vol.24 , pp. 400-402
    • ELLEGREN, H.1
  • 5
    • 3042782819 scopus 로고    scopus 로고
    • Microsatellites: Simple sequences with complex evolution
    • ELLEGREN, H., 2004 Microsatellites: simple sequences with complex evolution. Nat. Rev. Genet. 5: 435-445.
    • (2004) Nat. Rev. Genet , vol.5 , pp. 435-445
    • ELLEGREN, H.1
  • 6
    • 0028452009 scopus 로고
    • Least squares estimation of molecular distance-noise abatement in phylogenetic reconstruction
    • GOLDSTEIN, D. B., and D. D. POLLOCK, 1994 Least squares estimation of molecular distance-noise abatement in phylogenetic reconstruction. Theor. Popul. Biol. 44: 219-226.
    • (1994) Theor. Popul. Biol , vol.44 , pp. 219-226
    • GOLDSTEIN, D.B.1    POLLOCK, D.D.2
  • 7
    • 0030983892 scopus 로고    scopus 로고
    • Launching microsatellites: A review of mutation processes and methods of phylogenetic inference
    • GOLDSTEIN, D. B., and D. D. POLLOCK, 1997 Launching microsatellites: a review of mutation processes and methods of phylogenetic inference. J. Hered. 88: 335-342.
    • (1997) J. Hered , vol.88 , pp. 335-342
    • GOLDSTEIN, D.B.1    POLLOCK, D.D.2
  • 9
    • 0036183651 scopus 로고    scopus 로고
    • Mutation patterns at dinucleotide microsatellite loci in humans
    • HUANG, Q. Y., F. H. XU, H. SHEN, H. Y. DENG, Y. J. LIU et al., 2002 Mutation patterns at dinucleotide microsatellite loci in humans. Am. J. Hum. Genet. 70: 625-634.
    • (2002) Am. J. Hum. Genet , vol.70 , pp. 625-634
    • HUANG, Q.Y.1    XU, F.H.2    SHEN, H.3    DENG, H.Y.4    LIU, Y.J.5
  • 10
    • 0035993652 scopus 로고    scopus 로고
    • Evolutionary and statistical properties of three genetic distances
    • KALINOWSKI, S. T., 2002 Evolutionary and statistical properties of three genetic distances. Mol. Ecol. 11: 1263-1273.
    • (2002) Mol. Ecol , vol.11 , pp. 1263-1273
    • KALINOWSKI, S.T.1
  • 11
    • 75949146309 scopus 로고
    • The number of alleles that can be maintained in a finite population
    • KIMURA, M., and J. F. CROW, 1964 The number of alleles that can be maintained in a finite population. Genetics 49: 523-538.
    • (1964) Genetics , vol.49 , pp. 523-538
    • KIMURA, M.1    CROW, J.F.2
  • 12
    • 0032168989 scopus 로고    scopus 로고
    • Equilibrium distributions of microsatellite repeat length resulting from a balance between slippage events and point mutations
    • KRUGLYAK, S., R. T. DURRETT, M. D. SCHUG and C. F. AQUADRO, 1998 Equilibrium distributions of microsatellite repeat length resulting from a balance between slippage events and point mutations. Proc. Natl. Acad. Sci. USA 95: 10774-10778.
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95 , pp. 10774-10778
    • KRUGLYAK, S.1    DURRETT, R.T.2    SCHUG, M.D.3    AQUADRO, C.F.4
  • 13
    • 0015310208 scopus 로고
    • Selection in finite populations with multiple alleles. III. Genetic divergence with centripetal selection and mutation
    • LATTER, B. D., 1972 Selection in finite populations with multiple alleles. III. Genetic divergence with centripetal selection and mutation. Genetics 70: 475-490.
    • (1972) Genetics , vol.70 , pp. 475-490
    • LATTER, B.D.1
  • 14
    • 0000655270 scopus 로고
    • Genetic distance between populations
    • NEI, M., 1972 Genetic distance between populations. Am. Nat. 106: 283-291.
    • (1972) Am. Nat , vol.106 , pp. 283-291
    • NEI, M.1
  • 15
    • 0006919926 scopus 로고
    • Analysis of gene diversity in subdivided populations
    • NEI, M., 1973 Analysis of gene diversity in subdivided populations. Proc. Natl. Acad. Sci. USA 70: 3321-3323.
    • (1973) Proc. Natl. Acad. Sci. USA , vol.70 , pp. 3321-3323
    • NEI, M.1
  • 18
    • 0020965531 scopus 로고    scopus 로고
    • NEI, M., F. TAJIMA and Y. TATENO, 1983 Accuracy of estimated phylogenetic trees from molecular data. II. Gene frequency data. J. Mol. Evol. 19: 153-170.
    • NEI, M., F. TAJIMA and Y. TATENO, 1983 Accuracy of estimated phylogenetic trees from molecular data. II. Gene frequency data. J. Mol. Evol. 19: 153-170.
  • 19
    • 0015765702 scopus 로고
    • A model of mutation appropriate to estimate the number of electrophoretically detectable alleles in a finite population
    • OHTA, T., and M. KIMURA, 1973 A model of mutation appropriate to estimate the number of electrophoretically detectable alleles in a finite population. Genet. Res. 22: 201-204.
    • (1973) Genet. Res , vol.22 , pp. 201-204
    • OHTA, T.1    KIMURA, M.2
  • 20
    • 27644509150 scopus 로고    scopus 로고
    • Support from the relationship of genetic and geographic distance in human populations for a serial founder effect originating in Africa
    • RAMACHANDRAN, S., O. DESHPANDE, C. C. ROSEMAN, N. A. ROSENBERG, M. W. FELDMAN et al., 2005 Support from the relationship of genetic and geographic distance in human populations for a serial founder effect originating in Africa. Proc. Natl. Acad. Sci. USA 102: 15942-15947.
    • (2005) Proc. Natl. Acad. Sci. USA , vol.102 , pp. 15942-15947
    • RAMACHANDRAN, S.1    DESHPANDE, O.2    ROSEMAN, C.C.3    ROSENBERG, N.A.4    FELDMAN, M.W.5
  • 21
    • 0021038163 scopus 로고
    • Estimation of the coancestry coefficient: Basis for a short-term genetic distance
    • REYNOLDS, J., B. D. WEIR and C. C. COCKERHAM, 1983 Estimation of the coancestry coefficient: basis for a short-term genetic distance. Genetics 105: 765-779.
    • (1983) Genetics , vol.105 , pp. 765-779
    • REYNOLDS, J.1    WEIR, B.D.2    COCKERHAM, C.C.3
  • 22
    • 0019424782 scopus 로고
    • Comparison of phylogenetic trees
    • ROBINSON, D. F., and L. R. FOULDS, 1981 Comparison of phylogenetic trees. Math. Biosci. 53: 131-147.
    • (1981) Math. Biosci , vol.53 , pp. 131-147
    • ROBINSON, D.F.1    FOULDS, L.R.2
  • 24
    • 33750437374 scopus 로고    scopus 로고
    • ROSENBERG, N. A., S. MAHAJAN, S. RAMACHANDRAN, C. ZHAO, J. K. PRITCHARD et al., 2005 Clines, clusters, and the effect of study design on the inference of human population structure. PLoS Genet. 1: e70.
    • ROSENBERG, N. A., S. MAHAJAN, S. RAMACHANDRAN, C. ZHAO, J. K. PRITCHARD et al., 2005 Clines, clusters, and the effect of study design on the inference of human population structure. PLoS Genet. 1: e70.
  • 25
    • 0030888985 scopus 로고    scopus 로고
    • Genetic differentiation and estimation of gene flow from F-statistics under isolation by distance
    • ROUSSET, F., 1997 Genetic differentiation and estimation of gene flow from F-statistics under isolation by distance. Genetics 145: 1219-1228.
    • (1997) Genetics , vol.145 , pp. 1219-1228
    • ROUSSET, F.1
  • 26
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • SAITOU, N., and M. NEI, 1987 The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4: 406-425.
    • (1987) Mol. Biol. Evol , vol.4 , pp. 406-425
    • SAITOU, N.1    NEI, M.2
  • 27
    • 0000392112 scopus 로고
    • Isolation by distance in equilibrium and non-equilibrium populations
    • SLATKIN, M., 1993 Isolation by distance in equilibrium and non-equilibrium populations. Evolution 47: 264-279.
    • (1993) Evolution , vol.47 , pp. 264-279
    • SLATKIN, M.1
  • 28
    • 0028816747 scopus 로고
    • A measure of population subdivision based on microsatellite allele frequencies
    • SLATKIN, M., 1995 A measure of population subdivision based on microsatellite allele frequencies. Genetics 139: 457-462.
    • (1995) Genetics , vol.139 , pp. 457-462
    • SLATKIN, M.1
  • 29
    • 0028280349 scopus 로고
    • Estimation of evolutionary distance for reconstructing molecular phylogenetic trees
    • TAJIMA, F., and N. TAKEZAKI, 1994 Estimation of evolutionary distance for reconstructing molecular phylogenetic trees. Mol. Biol. Evol. 11: 278-286.
    • (1994) Mol. Biol. Evol , vol.11 , pp. 278-286
    • TAJIMA, F.1    TAKEZAKI, N.2
  • 30
    • 0029786076 scopus 로고    scopus 로고
    • Genetic distances and reconstruction of phylogenetic trees from microsatellite DNA
    • TAKEZAKI, N., and M. NEI, 1996 Genetic distances and reconstruction of phylogenetic trees from microsatellite DNA. Genetics 144: 389-399.
    • (1996) Genetics , vol.144 , pp. 389-399
    • TAKEZAKI, N.1    NEI, M.2
  • 31
    • 0034111151 scopus 로고    scopus 로고
    • The direction of microsatellite mutations is dependent upon allele length
    • XU, X., M. PENG, Z. FANG and X. XU, 2000 The direction of microsatellite mutations is dependent upon allele length. Nat. Genet. 24: 396-399.
    • (2000) Nat. Genet , vol.24 , pp. 396-399
    • XU, X.1    PENG, M.2    FANG, Z.3    XU, X.4
  • 32
    • 0029558134 scopus 로고
    • Microsatellite variability and genetic distances
    • ZHIVOTOVSKY, L. A., and M. W. FELDMAN, 1995 Microsatellite variability and genetic distances. Proc. Natl. Acad. Sci. USA 92: 11549-11552.
    • (1995) Proc. Natl. Acad. Sci. USA , vol.92 , pp. 11549-11552
    • ZHIVOTOVSKY, L.A.1    FELDMAN, M.W.2
  • 34
    • 0038744254 scopus 로고    scopus 로고
    • Features of evolution and expansion of modern humans, inferred from genomewide microsatellite markers
    • ZHIVOTOVSKY, L. A., N. A. ROSENBERG and M. W. FELDMAN, 2003 Features of evolution and expansion of modern humans, inferred from genomewide microsatellite markers. Am. J. Hum. Genet. 72: 1171-1186.
    • (2003) Am. J. Hum. Genet , vol.72 , pp. 1171-1186
    • ZHIVOTOVSKY, L.A.1    ROSENBERG, N.A.2    FELDMAN, M.W.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.