Genetic diversity among tea cultivars from China, Japan and Kenya revealed by ISSR markers and its implication for parental selection in tea breeding programmes

Plant Breeding

Volumn 127, Issue 2, 2008, Pages 166-172

  Yao, M Z ^a,b   Chen, L ^b   Liang, Y R ^a  

^a ZHEJIANG UNIVERSITY   (China)

^b INSTITUTE OF PLANT PROTECTION   (China)

Author keywords

Camellia sinensis; Genetic diversity; Genetic relationship; Inter simple sequence repeat

Indexed keywords

CAMELLIA SINENSIS;

EID: 40849097789     PISSN: 01799541     EISSN: 14390523     Source Type: Journal    
DOI: 10.1111/j.1439-0523.2007.01448.x     Document Type: Article

References (39)

1. Balasaravanan, T., P. K. Pius, R. Raj Kumar, N. Muraleedharan A. K. Shasany, 2003: Genetic diversity among south Indian tea germplasm (Camellia sinensis, C. assamica and C. assamica spp. lasiocalyx) using AFLP markers. Plant Sci. 165, 365 372.
2. Chen, L. S. Yamaguchi, 2002: Genetic diversity and phylogeny of tea plant (Camellia sinensis) and its related species and varieties in the section Thea genus Camellia determined by randomly amplified polymorphic DNA analysis. J. Hortic. Sci. Biotech. 77, 729 732.
3. Chen, L. Z. X. Zhou, 2005: Variations of main quality components of tea genetic resources [Camellia sinensis (L.) O. Kuntze] preserved in the China National Germplasm Tea Repository. Plant Foods Hum. Nutr. 60, 31 35.
4. Chen, L., Y. J. Yang, F. L. Yu, Q. K. Gao D. M. Chen, 1998: A study on genetic diversity of 15 tea cultivars (Camellia sinensis (L.) O. Kuntze) using RAPD markers. J. Tea Sci. 18, 21 27.
5. Chen, L., F. L. Yu Q. Q. Tong, 2000: Discussions on phylogenetic classification and evolution of Sect. Thea J. Tea Sci. 20, 89 94.
6. Chen, J., P. S. Wang, Y. M. Xia, M. Xu S. J. Pei, 2005: Genetic diversity and differentiation of Camellia sinensis L. (cultivated tea) and its wild relatives in Yunnan province of China, revealed by morphology, biochemistry and allozyme studies. Genet Res. Crop Evol. 52, 41 52.
7. Chen, L., Z. X. Zhou Y. J. Yang, 2007: Genetic improvement and breeding of tea plant (Camellia sinensis) in China: from individual selection to hybridization and molecular breeding. Euphytica 154, 239 248.
8. Dellaporta, S. L., J. Wood J. B. Hicks, 1983: A plant DNA minipreparation, version II. Plant Mol. Biol. Rep. 1, 19 21.
9. Excoffier, L., G. Laval S. Schneider, 2005: Arlequin ver. 3.0: an integrated software package for population genetics data analysis. Evol. Bioinform. Online 1, 47 50.
10. Fang, D. Q. M. L. Roose, 1997: Identification of closely related citrus cultivars with inter-simple sequence repeat markers. Theor. Appl. Genet. 95, 408 417.
11. FAO, 2005: Core Production Data. Available at: http://www.faostat.fao. org/, accessed on December 2006.
12. Freeman, S., J. West, C. James, V. Lea S. Mayes, 2004: Isolation and characterization of highly polymorphic microsatellites in tea (Camellia sinensis). Mol. Ecol. Notes 4, 324 326.
13. Hajra, N. G., 2001: Advances in selection and breeding of tea - a review. J. Plantation Crops 29, 1 17.
14. Katoh, Y., M. Katoh, Y. Takeda M. Omori, 2003: Genetic diversity within cultivated teas based on nucleotide sequence comparison of ribosomal RNA maturase in chloroplast DNA. Euphytica 134, 287 295.
15. Kaundun, S. S. S. Matsumoto, 2002: Heterologous nuclear and chloroplast microsatellite amplification and variation in tea, Camellia sinensis. Genome 45, 1041 1048.
16. Kaundun, S. S. S. Matsumoto, 2003: Identification of processed Japanese green tea based on polymorphisms generated by STS-RFLP analysis. J. Agric. Food Chem. 51, 1765 1770.
17. Kaundun, S. S., A. Zhyvoloup Y. G. Park, 2000: Evaluation of the genetic diversity among elite tea (Camellia sinensis var. sinensis) accessions using RAPD markers. Euphytica 115, 7 16.
18. Lagercrantz, U., H. Ellegren T. Kakanuga, 1993: The abundance of various polymorphic microsatellite motifs differs between plants and vertebrates. Nucleic Acids Res. 21, 1111 1115.
19. Lewontin, R. C., 1972: Apportionment of human diversity. Evol. Biol. 6, 381 398.
20. Luo, J. W., Z. P. Shi, C. W. Shen, C. L. Liu, Z. H. Gong Y. H. Huang, 2004: The genetic diversity of tea germplasm [Camellia sinensis (L.) O. Kuntze] by RAPD analysis. Acta Agron. Sin. 30, 266 269.
21. Matsumoto, S., Y. Kiriiwa Y. Takeda, 2002: Differentiation of Japanese green tea cultivars as revealed by RFLP analysis of phenylalanine ammonia-lyase DNA. Theor. Appl. Genet. 104, 998 1002.
22. Matsumoto, S., Y. Kiriiwa S. Yamaguchi, 2004: The Korea tea plant (Camellia sinensis): RFLP analysis of genetic diversity and relationship of Japanese tea. Breed. Sci. 54, 231 237.
23. Mishra, R. K. S. Sen-Mandi, 2004: Molecular profiling and development of DNA marker associated with drought tolerance in tea clones growing in Darjeeling. Curr. Sci. 87, 60 66.
24. Mondal, T. K., 2002: Assessment of genetic diversity of tea (Camellia sinensis (L.) O. Kuntze) by inter-simple sequence repeat polymerase chain reaction. Euphytica 128, 307 315.
25. Moreno, S., J. P. Martin J. M. Ortiz, 1998: Inter-simple sequence repeats PCR for characterization of closely related grapevine germplasm. Euphytica 101, 117 125.
26. Nei, M., 1973: Analysis of gene diversity in subdivided populations. Proc. Natl Acad. Sci. USA 70, 3321 3323.
27. Panaud, O., X. Chen S. R. McCouch, 1996: Development of microsatellite markers and characterization of simple sequence length polymorphism (SSLP) in rice. Mol. Gen. Genet. 252, 597 507.
28. Park, Y. G., S. S. Kaundun A. Zhyvoloup, 2002: Use of the bulked genomic DNA-based RAPD methodology to assess the genetic diversity among abandoned Korean tea plantations. Genet. Res. Crop Evol. 49, 159 165.
29. Paul, S., F. N. Wachira, W. Powell R. Waugh, 1997: Diversity and genetic differentiation among populations of Indian and Kenyan tea (Camellia sinensis (L.) O. Kuntze) revealed by AFLP markers. Theor. Appl. Genet. 94, 255 263.
30. Prevost, A. M. J. Wilkinson, 1999: A new system of comparing PCR primers applied to ISSR fingerprinting of potato cultivars. Theor. Appl. Genet. 98, 107 112.
31. Reddy, M. P., N. Sarla E. A. Siddiq, 2002: Inter simple sequence repeat (ISSR) polymorphism and its application in plant breeding. Euphytica 128, 9 17.
32. Rohlf, P. J., 1997: NTSYSpc: Numerical Taxonomy and Multivariate Analysis System, Version 2.1. Exeter Software, Setauket, New York, USA.
33. Seurei, P., 1996: Tea improvement in Kenya: a review. Tea 17, 76 81.
34. Takeda, Y., 2000: History and development in Japanese tea breeding. In: Y. G. Park D. I. Shin (eds Tea Culture, Tea Food Industry and Tea Tree Breeding in Korea, China and Japan, 139 158. The Korean Tea Society, Taegu, Korea.
35. Wachira, F. N., R. Waugh, C. A. Hackett W. Powell, 1995: Detection of genetic diversity in tea (Camellia sinensis) using RAPD markers. Genome 38, 201 210.
36. Wachira, F. N., W. Powell R. Waugh, 1997: An assessment of genetic diversity among Camellia sinensis L. (cultivated tea) and its wild relatives based on randomly amplified polymorphic DNA and organelle-specific STS. Heredity 78, 603 611.
37. Wachira, F. N., J. Tanaka Y. Takeda, 2001: Genetic variation and differentiation in tea (Camellia sinensis) germplasm revealed by RAPD and AFLP variation. J. Hortic. Sci. Biotech. 76, 557 563.
38. Yeh, F. C. T. J. B. Boyle, 1997: Population genetic analysis of co-dominant and dominant markers and quantitative traits. Belgian J. Bot. 129, 157.
39. Zietkiewicz, E., A. Rafalski D. Labuda, 1994: Genome fingerprinting by simple sequence repeat (SSR) - anchored polymerase chain reaction amplification. Genomics 20, 176 183.