GATA3 mRNA in ginbuna crucian carp (Carassius auratus langsdorfii): cDNA cloning, splice variants and expression analysis

Developmental and Comparative Immunology

Volumn 32, Issue 8, 2008, Pages 898-907

  Takizawa, Fumio ^a   Mizunaga, Yuha ^a   Araki, Kyosuke ^a   Moritomo, Tadaaki ^a   Ototake, Mitsuru ^b   Nakanishi, Teruyuki ^a  

^a NIHON UNIVERSITY   (Japan)

^b FISHERIES RESEARCH AGENCY   (Japan)

Author keywords

GATA3; Ginbuna crucian carp; Splice variant; T cell; Teleost; Th2; Transcription factor

Indexed keywords

COMPLEMENTARY DNA; MESSENGER RNA; TRANSCRIPTION FACTOR GATA 3;

ARTICLE; BRAIN; CARP; FLUORESCENCE ACTIVATED CELL SORTING; GENE SEQUENCE; GENETIC CONSERVATION; GENETIC TRANSCRIPTION; GILL; GOLDFISH; IMMUNE SYSTEM; LYMPHOCYTE FUNCTION; MOLECULAR CLONING; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEIN EXPRESSION; PROTEIN FUNCTION; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; RNA SPLICING; SEQUENCE ALIGNMENT; STOP CODON; T LYMPHOCYTE; TELEOST; TH2 CELL; THYMUS;

CARASSIUS; CARASSIUS AURATUS; TELEOSTEI; VERTEBRATA;

EID: 40849097523     PISSN: 0145305X     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.dci.2008.01.004     Document Type: Article

References (31)

1. Burch J.B. Regulation of GATA gene expression during vertebrate development. Semin Cell Dev Biol 16 (2005) 71-81
2. Murphy K.M., and Reiner S.L. The lineage decisions of helper T cells. Nat Rev Immunol 2 (2002) 933-944
3. Bosselut R. CD4/CD8-lineage differentiation in the thymus: from nuclear effectors to membrane signals. Nat Rev Immunol 4 (2004) 529-540
4. Pandolfi P.P., Roth M.E., Karis A., Leonard M.W., Dzierzak E., Grosveld F.G., et al. Targeted disruption of the GATA3 gene causes severe abnormalities in the nervous system and in fetal liver haematopoiesis. Nat Genet 11 (1995) 40-44
5. Li J.H., Shao J.Z., Xiang L.X., and Wen Y. Cloning, characterization and expression analysis of pufferfish interleukin-4 cDNA: the first evidence of Th2-type cytokine in fish. Mol Immunol 44 (2007) 2088-2096
6. Zou J., Carrington A., Collet B., Dijkstra J.M., Yoshiura Y., Bols N., et al. Identification and bioactivities of IFN-gamma in rainbow trout Oncorhynchus mykiss: the first Th1-type cytokine characterized functionally in fish. J Immunol 175 (2005) 2484-2494
7. Anderson M.K., Pant R., Miracle A.L., Sun X., Luer C.A., Walsh C.J., et al. Evolutionary origins of lymphocytes: ensembles of T cell and B cell transcriptional regulators in a cartilaginous fish. J Immunol 172 (2004) 5851-5860
8. Takizawa F., Araki K., Ito K., Moritomo T., and Nakanishi T. Expression analysis of two Eomesodermin homologues in zebrafish lymphoid tissues and cells. Mol Immnol 44 (2007) 2324-2331
9. Takizawa F., Araki K., Kobayashi I., Moritomo T., Ototake M., and Nakanishi T. Molecular cloning and expression analysis of T-bet in ginbuna crucian carp (Carassius auratus langsdorfii). Mol Immunol 45 (2008) 127-136
10. Heicklen-Klein A., McReynolds L.J., and Evans T. Using the zebrafish model to study GATA transcription factors. Semin Cell Dev Biol 16 (2005) 95-106
11. Neave B., Rodaway A., Wilson S.W., Patient R., and Holder N. Expression of zebrafish GATA 3 (gta3) during gastrulation and neurulation suggests a role in the specification of cell fate. Mech Dev 51 (1995) 169-182
12. Trede N.S., Zapata A., and Zon L.I. Fishing for lymphoid genes. Trends Immunol 22 (2003) 302-307
13. Nakanishi T., Fischer U., Dijkstra J.M., Hasegawa S., Somamoto T., Okamoto N., et al. Cytotoxic T cell function in fish. Dev Comp Immunol 26 (2002) 131-139
14. Fischer U., Utke K., Somamoto T., Kollner B., Ototake M., and Nakanishi T. Cytotoxic activities of fish leucocytes. Fish Shellfish Immunol 20 (2006) 209-226
15. Somamoto T., Yoshiura Y., Nakanishi T., and Ototake M. Molecular cloning and characterization of two types of CD8α from ginbuna crucian carp, Carassius auratus langsdorfii. Dev Comp Immunol 29 (2005) 693-702
16. Nonaka S, Somamoto T, Kato-Unoki Y, Ototake M, Nakanishi T, Nakao M. Molecular cloning of CD4 from ginbuna crucian carp, Carassius auratus langsdorfii. Fish Sci, in press.
17. Rombout J.H., Joosten P.H., Engelsma M.Y., Vos A.P., Taverne N., and Taverne-Thiele J.J. Indications for a distinct putative T cell population in mucosal tissue of carp (Cyprinus carpio L.). Dev Comp Immunol 22 (1998) 63-77
18. Huttenhuis H.B., Romano N., Van Oosterhoud C.N., Taverne-Thiele A.J., Mastrolia L., Van Muiswinkel W.B., et al. The ontogeny of mucosal immune cells in common carp (Cyprinus carpio L.). Anat Embryol 211 (2006) 19-29
19. Lowry J.A., and Atchley W.R. Molecular evolution of the GATA family of transcription factors: conservation within the DNA-binding domain. J Mol Evol 50 (2000) 103-115
20. Fox A.H., Kowalski K., King G.F., Mackay J.P., and Crossley M. Key residues characteristic of GATA N-fingers are recognized by FOG. J Biol Chem 273 (1998) 33595-33603
21. Nesbit M.A., Bowl M.R., Harding B., Ali A., Ayala A., Crowe C., et al. Characterization of GATA3 mutations in the hypoparathyroidism, deafness, and renal dysplasia (HDR) syndrome. J Biol Chem 279 (2004) 22624-22634
22. Takemoto N., Arai K., and Miyatake S. The differential involvement of the N-finger of GATA-3 in chromatin remodeling and transactivation during Th2 development. J Immunol 169 (2002) 4103-4107
23. Shinnakasu R., Yamashita M., Shinoda K., Endo Y., Hosokawa H., Hasegawa A., et al. Critical YxKxHxxxRP motif in the C-terminal region of GATA3 for its DNA binding and function. J Immunol 177 (2006) 5801-5810
24. Marine J., and Winoto A. The human enhancer-binding protein Gata3 binds to several T-cell receptor regulatory elements. PNAS 88 (1991) 7284-7288
25. Walton R.Z., Bruce A.E., Olivey H.E., Najib K., Johnson V., Earley J.U., et al. Fog1 is required for cardiac looping in zebrafish. Dev Biol 289 (2006) 482-493
26. Drevet J.R., Swevers L., and Iatrou K. Developmental regulation of a silkworm gene encoding multiple GATA-type transcription factors by alternative splicing. J Mol Biol 246 (1995) 43-53
27. MacNeill C., Ayres B., Laverriere A.C., and Burch J.B. Transcripts for functionally distinct isoforms of chicken GATA-5 are differentially expressed from alternative first exons. J Biol Chem 272 (1997) 8396-8401
28. Waltzer L., Bataille L., Peyrefitte S., and Haenlin M. Two isoforms of Serpent containing either one or two GATA zinc fingers have different roles in Drosophila haematopoiesis. EMBO J .21 (2002) 5477-5486
29. Van Esch H., Groenen P., Nesbit M.A., Schuffenhauer S., Lichtner P., Vanderlinden G., et al. GATA3 haplo-insufficiency causes human HDR syndrome. Nature 406 (2000) 419-422
30. Ali A., Christie P.T., Grigorieva IV, et al. Functional characterization of GATA3 mutations causing the hypoparathyroidism-deafness-renal (HDR) dysplasia syndrome: insight into mechanisms of DNA binding by the GATA3 transcription factor. Hum Mol Genet 16 (2007) 265-275
31. Asnagli H., Afkarian M., and Murphy K.M. Identification of an alternative GATA-3 promoter directing tissue-specific gene expression in mouse and human. J Immunol 168 (2002) 4268-4271