-
1
-
-
0029810585
-
Emerging foodborne pathogens: E. coli O157:H7 as a model of entry of a new pathogen into the food supply of the developed world
-
Armstrong, G. L., J. Hollingsworth, and J. G. Morris. 1996. Emerging foodborne pathogens: E. coli O157:H7 as a model of entry of a new pathogen into the food supply of the developed world. Epidemiol. Rev. 18:29-51.
-
(1996)
Epidemiol. Rev
, vol.18
, pp. 29-51
-
-
Armstrong, G.L.1
Hollingsworth, J.2
Morris, J.G.3
-
2
-
-
27944469097
-
Role of in vivo passage on the environmental adaption of enterohemorrhagic Escherichia coli O157:H7: Cross-induction of the viable but nonculturable state by osmotic and oxidative stresses
-
Asakura, H., S. Igimi, K. Kawamoto, S. Yamamoto, and S. Makino. 2005. Role of in vivo passage on the environmental adaption of enterohemorrhagic Escherichia coli O157:H7: cross-induction of the viable but nonculturable state by osmotic and oxidative stresses. FEMS Microbiol. Lett. 253:243-249.
-
(2005)
FEMS Microbiol. Lett
, vol.253
, pp. 243-249
-
-
Asakura, H.1
Igimi, S.2
Kawamoto, K.3
Yamamoto, S.4
Makino, S.5
-
3
-
-
33745013353
-
A recombinant bacteriophage-based assay for the discriminative detection of culturable and viable but nonculturable Escherichia coli O157:H7
-
Awais, R., H. Fukudomi, K. Miyanaga, H. Unno, and Y. Tanji. 2006. A recombinant bacteriophage-based assay for the discriminative detection of culturable and viable but nonculturable Escherichia coli O157:H7. Biotechnol. Prog. 22:853-859.
-
(2006)
Biotechnol. Prog
, vol.22
, pp. 853-859
-
-
Awais, R.1
Fukudomi, H.2
Miyanaga, K.3
Unno, H.4
Tanji, Y.5
-
4
-
-
22644433541
-
Comparison of primers for the detection of pathogenic Escherichia coli using real-time PCR
-
Barak, J. D., K. Sananikone, and M. J. Delwiche. 2005. Comparison of primers for the detection of pathogenic Escherichia coli using real-time PCR. Lett. Appl. Microbiol. 41:112-118.
-
(2005)
Lett. Appl. Microbiol
, vol.41
, pp. 112-118
-
-
Barak, J.D.1
Sananikone, K.2
Delwiche, M.J.3
-
5
-
-
0037614638
-
Rapid identification of Escherichia coli pathotypes by virulence gene detection with DNA microarrays
-
Bekal, S., R. Brousseau, L. Masson, G. Profontaine, J. Fairbrother, and J. Harel. 2003. Rapid identification of Escherichia coli pathotypes by virulence gene detection with DNA microarrays. J. Clin. Microbiol. 41:2113-2125.
-
(2003)
J. Clin. Microbiol
, vol.41
, pp. 2113-2125
-
-
Bekal, S.1
Brousseau, R.2
Masson, L.3
Profontaine, G.4
Fairbrother, J.5
Harel, J.6
-
6
-
-
0032587252
-
LIVE/DEAD BacLight: Application of a new rapid staining method for direct enumeration of viable and total bacteria in drinking water
-
Boulos, L., M. Prevost, B. Barbeau, J. Coallier, and R. Desjardins. 1999. LIVE/DEAD BacLight: application of a new rapid staining method for direct enumeration of viable and total bacteria in drinking water. J. Microbiol. Methods 37:77-86.
-
(1999)
J. Microbiol. Methods
, vol.37
, pp. 77-86
-
-
Boulos, L.1
Prevost, M.2
Barbeau, B.3
Coallier, J.4
Desjardins, R.5
-
7
-
-
0035207141
-
Detection of Escherichia coli O157:H7 in soil and water using multiplex PCR
-
Campbell, G. R., J. I. Prosser, L. A. Glover, and K. Killham. 2001. Detection of Escherichia coli O157:H7 in soil and water using multiplex PCR. J. Appl. Microbiol. 91:1-7.
-
(2001)
J. Appl. Microbiol
, vol.91
, pp. 1-7
-
-
Campbell, G.R.1
Prosser, J.I.2
Glover, L.A.3
Killham, K.4
-
8
-
-
0042378940
-
Direct PCR detection of Escherichia coli O157:H7
-
Fode-Vaughan, K. A., J. S. Maki, J. A. Benson, and M. L. P. Collins. 2003. Direct PCR detection of Escherichia coli O157:H7. Lett. Appl. Microbiol. 37:239-243.
-
(2003)
Lett. Appl. Microbiol
, vol.37
, pp. 239-243
-
-
Fode-Vaughan, K.A.1
Maki, J.S.2
Benson, J.A.3
Collins, M.L.P.4
-
9
-
-
0034009237
-
Leaching of Escherichia coli O157:H7 in diverse soils under various agricultural management practices
-
Gagliardi, J. V., and J. S. Karns. 2000. Leaching of Escherichia coli O157:H7 in diverse soils under various agricultural management practices. Appl. Environ. Microbiol. 66:877-883.
-
(2000)
Appl. Environ. Microbiol
, vol.66
, pp. 877-883
-
-
Gagliardi, J.V.1
Karns, J.S.2
-
10
-
-
33846435742
-
Microarray-based analysis of microbial community RNAs by whole-community RNA amplification
-
Gao, H., Z. K. Yang, T. J. Gentry, L. Wu, C. W. Schadt, and J. Zhou. 2007. Microarray-based analysis of microbial community RNAs by whole-community RNA amplification. Appl. Environ. Microbiol. 73:563-571.
-
(2007)
Appl. Environ. Microbiol
, vol.73
, pp. 563-571
-
-
Gao, H.1
Yang, Z.K.2
Gentry, T.J.3
Wu, L.4
Schadt, C.W.5
Zhou, J.6
-
11
-
-
33748707177
-
Microarray applications in microbial ecology research
-
Gentry, T. J., G. S. Wickham, C. W. Schadt, Z. He, and J. Zhou. 2006. Microarray applications in microbial ecology research. Microb. Ecol. 52:159-175.
-
(2006)
Microb. Ecol
, vol.52
, pp. 159-175
-
-
Gentry, T.J.1
Wickham, G.S.2
Schadt, C.W.3
He, Z.4
Zhou, J.5
-
12
-
-
34548852868
-
Monospecific and bispecific antibodies against E. coli O157 for diagnostics
-
Guttikonda, S., X. L. Tang, B. M. Yang, G. D. Armstrong, and M. R. Suresh. 2007. Monospecific and bispecific antibodies against E. coli O157 for diagnostics. J. Immunol. Methods 327:1-9.
-
(2007)
J. Immunol. Methods
, vol.327
, pp. 1-9
-
-
Guttikonda, S.1
Tang, X.L.2
Yang, B.M.3
Armstrong, G.D.4
Suresh, M.R.5
-
13
-
-
34248159046
-
-
He, Z., T. J. Gentry, C. W. Schadt, L. Wu, J. Liebich, S. C. Chong, Z. Huang, W. Wu, B. Gu, P. Jardine, C. Criddle, and J. Zhou. 2007. Geochip: a comprehensive microarray for investigating biogeochemical, ecological and environmental processes. ISME J. 1:67-77.
-
He, Z., T. J. Gentry, C. W. Schadt, L. Wu, J. Liebich, S. C. Chong, Z. Huang, W. Wu, B. Gu, P. Jardine, C. Criddle, and J. Zhou. 2007. Geochip: a comprehensive microarray for investigating biogeochemical, ecological and environmental processes. ISME J. 1:67-77.
-
-
-
-
15
-
-
8344261645
-
Multiple sample amplification and genotyping integrated on a single electronic microarray
-
Huang, Y., J. Shirajian, A. Schroder, Z. Yao, T. Summers, D. Hodko, and R. Sosnowski. 2004. Multiple sample amplification and genotyping integrated on a single electronic microarray. Electrophoresis 25:3106-3116.
-
(2004)
Electrophoresis
, vol.25
, pp. 3106-3116
-
-
Huang, Y.1
Shirajian, J.2
Schroder, A.3
Yao, Z.4
Summers, T.5
Hodko, D.6
Sosnowski, R.7
-
16
-
-
0031861484
-
Resistance to dryness of Escherichia coli O157:H7 strains from outbreak in Saki City, Japan
-
Iijima, Y., M. Matsumoto, K. Higuchi, T. Furuta, and T. Honda. 1996. Resistance to dryness of Escherichia coli O157:H7 strains from outbreak in Saki City, Japan. Emerg. Infect. Dis. 4:340-341.
-
(1996)
Emerg. Infect. Dis
, vol.4
, pp. 340-341
-
-
Iijima, Y.1
Matsumoto, M.2
Higuchi, K.3
Furuta, T.4
Honda, T.5
-
17
-
-
34249871145
-
Effect of phosphorus on survival of Escherichia coli in drinking water biofilms
-
Juhna, T., D. Birzniece, and J. Rubulis. 2007. Effect of phosphorus on survival of Escherichia coli in drinking water biofilms. Appl. Environ. Microbiol. 73:3755-3758.
-
(2007)
Appl. Environ. Microbiol
, vol.73
, pp. 3755-3758
-
-
Juhna, T.1
Birzniece, D.2
Rubulis, J.3
-
18
-
-
0035458751
-
Examination of recovery in vitro and in vivo of nonculturable Escherichia coli O157:H7
-
Kolling, G. L., and K. R. Matthews. 2001. Examination of recovery in vitro and in vivo of nonculturable Escherichia coli O157:H7. Appl. Environ. Microbiol. 67:3928-3933.
-
(2001)
Appl. Environ. Microbiol
, vol.67
, pp. 3928-3933
-
-
Kolling, G.L.1
Matthews, K.R.2
-
19
-
-
40549108086
-
-
Kushner, S. R. 1996. mRNA decay, p. 849-860. In F. C. Neidhardt, R. Curtiss III, J. L. Ingraham, E. C. C. Lin, K. B. Low, B. Magasanik, W. S. Reznikoff, M. Riley, M. Schaechter, and H. E. Umbarger (ed.), Escherichia coli and Salmonella: cellular and molecular biology, 2nd ed., 1. ASM Press, Washington, DC.
-
Kushner, S. R. 1996. mRNA decay, p. 849-860. In F. C. Neidhardt, R. Curtiss III, J. L. Ingraham, E. C. C. Lin, K. B. Low, B. Magasanik, W. S. Reznikoff, M. Riley, M. Schaechter, and H. E. Umbarger (ed.), Escherichia coli and Salmonella: cellular and molecular biology, 2nd ed., vol. 1. ASM Press, Washington, DC.
-
-
-
-
20
-
-
84871508090
-
Surveillance for waterborne-disease outbreaks - United States, 1999-2000
-
Lee, S. H., D. A. Levy, G. F. Craun, M. J. Beach, and R. L. Calderon. 2002. Surveillance for waterborne-disease outbreaks - United States, 1999-2000. MMWR Surveill. Summ. 51:1-47.
-
(2002)
MMWR Surveill. Summ
, vol.51
, pp. 1-47
-
-
Lee, S.H.1
Levy, D.A.2
Craun, G.F.3
Beach, M.J.4
Calderon, R.L.5
-
21
-
-
15844371801
-
Simple isolation of functional RNA from woody stems of gymnosperms
-
Lewinsohn, E., C. L. Steele, and R. Croteau. 1994. Simple isolation of functional RNA from woody stems of gymnosperms. Plant Mol. Biol. Rep. 12:20-25.
-
(1994)
Plant Mol. Biol. Rep
, vol.12
, pp. 20-25
-
-
Lewinsohn, E.1
Steele, C.L.2
Croteau, R.3
-
22
-
-
34247508560
-
Expression profiles of bovine genes in the rectoanal junction mucosa during colonization with Escherichia coli O157: H7
-
Li, J., and C. J. Hovde. 2007. Expression profiles of bovine genes in the rectoanal junction mucosa during colonization with Escherichia coli O157: H7. Appl. Environ. Microbiol. 73:2380-2385.
-
(2007)
Appl. Environ. Microbiol
, vol.73
, pp. 2380-2385
-
-
Li, J.1
Hovde, C.J.2
-
23
-
-
33748562524
-
Electronic deoxyribonucleic acid (DNA) microarray detection of viable pathogenic Escherichia coli, Vibrio cholerae, and Salmonella Typhi
-
Liu, Y., Z. Gong, N. Morin, O. Pui, M. Cheung, H. Zhang, and X. F. Li. 2006. Electronic deoxyribonucleic acid (DNA) microarray detection of viable pathogenic Escherichia coli, Vibrio cholerae, and Salmonella Typhi. Anal. Chim. Acta 578:75-81.
-
(2006)
Anal. Chim. Acta
, vol.578
, pp. 75-81
-
-
Liu, Y.1
Gong, Z.2
Morin, N.3
Pui, O.4
Cheung, M.5
Zhang, H.6
Li, X.F.7
-
24
-
-
0031983314
-
Nonculturablity: Adaptation or debilitation?
-
Mcdougald, D., S. A. Rice, D. Weichart, and S. Kjelleberg. 1998. Nonculturablity: adaptation or debilitation? FEMS Microbiol. Ecol. 25:1-9.
-
(1998)
FEMS Microbiol. Ecol
, vol.25
, pp. 1-9
-
-
Mcdougald, D.1
Rice, S.A.2
Weichart, D.3
Kjelleberg, S.4
-
25
-
-
0026566419
-
Viable but non-culturable forms of potentially pathogenic bacteria in water
-
McKay, A. M. 1992. Viable but non-culturable forms of potentially pathogenic bacteria in water. Lett. Appl. Microbiol. 14:29-135.
-
(1992)
Lett. Appl. Microbiol
, vol.14
, pp. 29-135
-
-
McKay, A.M.1
-
27
-
-
7044260850
-
Reverse transcription-multiplex PCR assay for simultaneous detection of Escherichia coli O157:H7, Vibrio cholerae O1, and Salmonella Typhi
-
Morin, N., Z. Gong, and X. F. Li. 2004. Reverse transcription-multiplex PCR assay for simultaneous detection of Escherichia coli O157:H7, Vibrio cholerae O1, and Salmonella Typhi. Clin. Chem. 50:2037-2044.
-
(2004)
Clin. Chem
, vol.50
, pp. 2037-2044
-
-
Morin, N.1
Gong, Z.2
Li, X.F.3
-
28
-
-
0026317736
-
Resuscitation of Vibrio vulnificus from the viable but nonculturable state
-
Nilsson, L., J. D. Oliver, and S. Kjelleberg. 1991. Resuscitation of Vibrio vulnificus from the viable but nonculturable state. J. Bacteriol. 173:5054-5059.
-
(1991)
J. Bacteriol
, vol.173
, pp. 5054-5059
-
-
Nilsson, L.1
Oliver, J.D.2
Kjelleberg, S.3
-
29
-
-
85143805079
-
Public health significance of viable but nonculturable bacteria
-
R. R. Colwell and D. J. Grimes ed, ASM Press, Washington, DC
-
Oliver, J. D. 2000. Public health significance of viable but nonculturable bacteria, p. 277-300. In R. R. Colwell and D. J. Grimes (ed.), Nonculturable microorganisms in the environment. ASM Press, Washington, DC.
-
(2000)
Nonculturable microorganisms in the environment
, pp. 277-300
-
-
Oliver, J.D.1
-
30
-
-
15944387317
-
The viable but non-culturable state in bacteria
-
Oliver, J. D. 2005. The viable but non-culturable state in bacteria. J. Microbiol. 43:93-100.
-
(2005)
J. Microbiol
, vol.43
, pp. 93-100
-
-
Oliver, J.D.1
-
31
-
-
0027442611
-
Efficacy of filter types for detecting Campylobacter jejuni and Campylobacter coli in environmental water samples by polymerase chain reaction
-
Oyofo, B. A., and D. M. Rollins. 1993. Efficacy of filter types for detecting Campylobacter jejuni and Campylobacter coli in environmental water samples by polymerase chain reaction. Appl. Environ. Microbiol. 59:4090-4095.
-
(1993)
Appl. Environ. Microbiol
, vol.59
, pp. 4090-4095
-
-
Oyofo, B.A.1
Rollins, D.M.2
-
32
-
-
0032807645
-
The epidemiology, detection and control of Escherichia coli O157
-
Phillips, C. A. 1999. The epidemiology, detection and control of Escherichia coli O157. J. Sci. Food Agric. 79:1367-1381.
-
(1999)
J. Sci. Food Agric
, vol.79
, pp. 1367-1381
-
-
Phillips, C.A.1
-
33
-
-
0036794788
-
Resuscitation of Salmonella enterica serovar Typhimurium and enterohemorrhagic Escherichia coli from the viable but nonculturable state by heat-stable enterobacterial autoinducer
-
Reissbrodt, R., I. Rienaecker, J. M. Romanova, P. P. E. Freestone, R. D. Haigh, M. Lyte, H. Tschape, and P. H. Williams. 2002. Resuscitation of Salmonella enterica serovar Typhimurium and enterohemorrhagic Escherichia coli from the viable but nonculturable state by heat-stable enterobacterial autoinducer. Appl. Environ. Microbiol. 68:4788-4794.
-
(2002)
Appl. Environ. Microbiol
, vol.68
, pp. 4788-4794
-
-
Reissbrodt, R.1
Rienaecker, I.2
Romanova, J.M.3
Freestone, P.P.E.4
Haigh, R.D.5
Lyte, M.6
Tschape, H.7
Williams, P.H.8
-
34
-
-
3242773890
-
Detection of genes involved in biodegradation and biotransformation in microbial communities by using 50-mer oligonucleotide microarrays
-
Rhee, S.-K., X. Liu, L. Wu, S. C. Chong, X. Wan, and J. Zhou. 2004. Detection of genes involved in biodegradation and biotransformation in microbial communities by using 50-mer oligonucleotide microarrays. Appl. Environ. Microbiol. 70:4303-4317.
-
(2004)
Appl. Environ. Microbiol
, vol.70
, pp. 4303-4317
-
-
Rhee, S.-K.1
Liu, X.2
Wu, L.3
Chong, S.C.4
Wan, X.5
Zhou, J.6
-
35
-
-
0004136246
-
-
3rd ed, p, Cold Spring Harbor Laboratory Press, New York, NY
-
Sambrook, J., and D. W. Russell. 2001. Molecular cloning: a laboratory manual, 3rd ed., p. A8.9. Cold Spring Harbor Laboratory Press, New York, NY.
-
(2001)
Molecular cloning: A laboratory manual
-
-
Sambrook, J.1
Russell, D.W.2
-
36
-
-
1642523569
-
Bacterial separation and concentration from complex sample matrices: A review
-
Stevens, K. A., and L. A. Jaykus. 2004. Bacterial separation and concentration from complex sample matrices: a review. Crit. Rev. Microbiol. 30:7-24.
-
(2004)
Crit. Rev. Microbiol
, vol.30
, pp. 7-24
-
-
Stevens, K.A.1
Jaykus, L.A.2
-
37
-
-
0031596380
-
Survival of enterohemorrhagic Escherichia coli O157:H7 in water
-
Wang, G., and M. P. Doyle. 1998. Survival of enterohemorrhagic Escherichia coli O157:H7 in water. J. Food Prot. 61:662-667.
-
(1998)
J. Food Prot
, vol.61
, pp. 662-667
-
-
Wang, G.1
Doyle, M.P.2
-
38
-
-
1542719398
-
DNA microarray for discrimination between pathogenic O157:H7 EDL933 and non-pathogenic Escherichia coli strains
-
Wu, C. F., J. J. Valdes, W. E. Bentley, and J. W. Sekowski. 2003. DNA microarray for discrimination between pathogenic O157:H7 EDL933 and non-pathogenic Escherichia coli strains. Biosens. Bioelectron. 19:1-8.
-
(2003)
Biosens. Bioelectron
, vol.19
, pp. 1-8
-
-
Wu, C.F.1
Valdes, J.J.2
Bentley, W.E.3
Sekowski, J.W.4
-
39
-
-
10644242777
-
Development and evaluation of microarray-based whole genome hybridization for detection of microorganisms within the context of environmental applications
-
Wu, L., D. K. Thompson, X. Liu, M. W. Fields, C. E. Bagwell, J. M. Tiedje, and J. Zhou. 2004. Development and evaluation of microarray-based whole genome hybridization for detection of microorganisms within the context of environmental applications. Environ. Sci. Technol. 38:6775-6782.
-
(2004)
Environ. Sci. Technol
, vol.38
, pp. 6775-6782
-
-
Wu, L.1
Thompson, D.K.2
Liu, X.3
Fields, M.W.4
Bagwell, C.E.5
Tiedje, J.M.6
Zhou, J.7
-
40
-
-
33746095025
-
Microarray-based analysis of subnanogram quantities of microbial community DNAs by using whole-community genome amplification
-
Wu, L., X. Liu, C. W. Schadt, and J. Zhou. 2006. Microarray-based analysis of subnanogram quantities of microbial community DNAs by using whole-community genome amplification. Appl. Environ. Microbiol. 72:4931-4941.
-
(2006)
Appl. Environ. Microbiol
, vol.72
, pp. 4931-4941
-
-
Wu, L.1
Liu, X.2
Schadt, C.W.3
Zhou, J.4
-
41
-
-
0036233554
-
A reverse transcriptase-polymerase chain reaction assay for detection of viable Escherichia coli O157:H7: Investigation of specific target genes
-
Yaron, S., and K. R. Matthews. 2002. A reverse transcriptase-polymerase chain reaction assay for detection of viable Escherichia coli O157:H7: investigation of specific target genes. J. Appl. Microbiol. 92:633-640.
-
(2002)
J. Appl. Microbiol
, vol.92
, pp. 633-640
-
-
Yaron, S.1
Matthews, K.R.2
-
42
-
-
34249932634
-
-
Yergeau, E., S. Rang, Z. He, J. Zhou, and G. A. Kowalchuk. 2007. Functional microarray analysis of nitrogen and carbon cycling genes across an Antarctic latitudinal transect. ISME J. 1:63-179.
-
Yergeau, E., S. Rang, Z. He, J. Zhou, and G. A. Kowalchuk. 2007. Functional microarray analysis of nitrogen and carbon cycling genes across an Antarctic latitudinal transect. ISME J. 1:63-179.
-
-
-
-
43
-
-
6344291059
-
A rapid bioassay for single bacterial cell quantitation using bioconjugated nanoparticles
-
Zhao, X., L. R. Hilliard, S. J. Mechery, Y. Wang, R. P. Bagwe, and S. Jin. 2004. A rapid bioassay for single bacterial cell quantitation using bioconjugated nanoparticles. Proc. Natl. Acad. Sci. USA 101:15027-15032.
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 15027-15032
-
-
Zhao, X.1
Hilliard, L.R.2
Mechery, S.J.3
Wang, Y.4
Bagwe, R.P.5
Jin, S.6
-
44
-
-
0037772204
-
Microarrays for bacterial detection and microbial community analysis
-
Zhou, J. 2003. Microarrays for bacterial detection and microbial community analysis. Curr. Opin. Microbiol. 6:288-294.
-
(2003)
Curr. Opin. Microbiol
, vol.6
, pp. 288-294
-
-
Zhou, J.1
-
45
-
-
84978429379
-
Microarray technology and applications in environmental microbiology
-
Zhou, J., and D. K. Thompson. 2004. Microarray technology and applications in environmental microbiology. Adv. Agron. 82:183-270.
-
(2004)
Adv. Agron
, vol.82
, pp. 183-270
-
-
Zhou, J.1
Thompson, D.K.2
|