-
1
-
-
0032535245
-
Regulation of the heat shock transcriptional response: Cross talk between a family of heat shock factors, molecular chaperones, and negative regulators
-
Morimoto,R.I. (1998) Regulation of the heat shock transcriptional response: cross talk between a family of heat shock factors, molecular chaperones, and negative regulators. Genes Dev., 12, 3788-3796.
-
(1998)
Genes Dev.
, vol.12
, pp. 3788-3796
-
-
Morimoto, R.I.1
-
2
-
-
17744372861
-
Roles of the heat shock transcription factors in regulation of the heat shock response and beyond
-
Pirkkala,L., Nykanen,P. and Sistonen,L. (2001) Roles of the heat shock transcription factors in regulation of the heat shock response and beyond. FASFB J., 15, 1118-1131.
-
(2001)
FASFB J.
, vol.15
, pp. 1118-1131
-
-
Pirkkala, L.1
Nykanen, P.2
Sistonen, L.3
-
3
-
-
0036901003
-
Multisite phosphorylation provides sophisticated regulation of transcription factors
-
Holmberg,C.I., Tran,S.E.. Eriksson,J.E. and Sistonen,L. (2002) Multisite phosphorylation provides sophisticated regulation of transcription factors. Trends Biochem. Sci., 27, 619-627.
-
(2002)
Trends Biochem. Sci.
, vol.27
, pp. 619-627
-
-
Holmberg, C.I.1
Tran, S.E.2
Eriksson, J.E.3
Sistonen, L.4
-
4
-
-
0031452176
-
HSF1 transcription factor concentrates in nuclear foci during heat shock: Relationship with transcription sites
-
Jolly,C., Morimoto,R., Robert-Nicoud,M. and Vourc'h,C. (1997) HSF1 transcription factor concentrates in nuclear foci during heat shock: relationship with transcription sites. J. Cell. Sci., 110, 2935-2941.
-
(1997)
J. Cell Sci.
, vol.110
, pp. 2935-2941
-
-
Jolly, C.1
Morimoto, R.2
Robert-Nicoud, M.3
Vourc'h, C.4
-
5
-
-
0031467707
-
HSF1 granules: A novel stress-induced nuclear compartment of human cells
-
Cotto,J., Fox,S. and Morimoto,R. (1997) HSF1 granules: a novel stress-induced nuclear compartment of human cells. J. Cell. Sci., 110, 2925-2934.
-
(1997)
J. Cell Sci.
, vol.110
, pp. 2925-2934
-
-
Cotto, J.1
Fox, S.2
Morimoto, R.3
-
6
-
-
0037018158
-
In vivo binding of active heat shock transcripon factor 1 to human chromosome 9 heterochromatin during stress
-
Jolly,C., Konecny,L., Grady,D.L., Kutskova,Y.A., Cotto,J.J., Morimoto,R.I. and Vourc'h,C. (2002) In vivo binding of active heat shock transcripon factor 1 to human chromosome 9 heterochromatin during stress. J. Cell. Biol., 156, 775-781.
-
(2002)
J. Cell Biol.
, vol.156
, pp. 775-781
-
-
Jolly, C.1
Konecny, L.2
Grady, D.L.3
Kutskova, Y.A.4
Cotto, J.J.5
Morimoto, R.I.6
Vourc'h, C.7
-
7
-
-
0035985201
-
Human chromosomes 9, 12, and 15 contain the nucleation sites of stress-induced nuclear bodies
-
Denegri,M., Moralli,D., Rocchi,M., Biggiogera,M., Raimondi,E., Cobianchi,F., De Carli,L., Riva,S. and Biamonti,G. (2002) Human chromosomes 9, 12, and 15 contain the nucleation sites of stress-induced nuclear bodies. Mol. Biol. Cell., 13, 2069-2079.
-
(2002)
Mol. Biol. Cell
, vol.13
, pp. 2069-2079
-
-
Denegri, M.1
Moralli, D.2
Rocchi, M.3
Biggiogera, M.4
Raimondi, E.5
Cobianchi, F.6
De Carli, L.7
Riva, S.8
Biamonti, G.9
-
8
-
-
0347432388
-
Stress-induced transcription of satellite III repeats
-
Jolly,C., Metz,A., Govin,J., Vigneron,M., Turner,B.M., Khochbin,S. and Vourc'h,C. (2004) Stress-induced transcription of satellite III repeats. J. Cell. Biol., 164, 25-33.
-
(2004)
J. Cell Biol.
, vol.164
, pp. 25-33
-
-
Jolly, C.1
Metz, A.2
Govin, J.3
Vigneron, M.4
Turner, B.M.5
Khochbin, S.6
Vourc'h, C.7
-
9
-
-
0742270643
-
Transcriptional activation of a constitutive heterochromatic domain of the human genome in response to heat shock
-
Rizzi,N., Denegri,M., Chiodi,I., Corioni,M., Valgardsdottir,R., Cobianchi,F., Riva,S. and Biamonti,G. (2004) Transcriptional activation of a constitutive heterochromatic domain of the human genome in response to heat shock. Mol. Biol. Cell, 15, 543-551.
-
(2004)
Mol. Biol. Cell
, vol.15
, pp. 543-551
-
-
Rizzi, N.1
Denegri, M.2
Chiodi, I.3
Corioni, M.4
Valgardsdottir, R.5
Cobianchi, F.6
Riva, S.7
Biamonti, G.8
-
10
-
-
0035192625
-
Stress-induced nuclear bodies are sites of accumulation of pre-mRNA processing factors
-
Denegri,M., Chiodi,I., Corioni,M., Cobianchi,F., Riva,S. and Biamonti,G. (2001) Stress-induced nuclear bodies are sites of accumulation of pre-mRNA processing factors. Mol. Biol. Cell, 12, 3502-3514.
-
(2001)
Mol. Biol. Cell
, vol.12
, pp. 3502-3514
-
-
Denegri, M.1
Chiodi, I.2
Corioni, M.3
Cobianchi, F.4
Riva, S.5
Biamonti, G.6
-
11
-
-
0035252410
-
Alternative splicing: Increasing diversity in the proteomic world
-
Graveley,B.R. (2001) Alternative splicing: increasing diversity in the proteomic world. Trends Genet., 17, 100-107.
-
(2001)
Trends Genet.
, vol.17
, pp. 100-107
-
-
Graveley, B.R.1
-
12
-
-
0034256020
-
Alternative pre-mRNA splicing: The logic of combinatorial control
-
Smith,C.W. and Valcarcel,J. (2000) Alternative pre-mRNA splicing: the logic of combinatorial control. Trends Biochem. Sci., 25, 381-388.
-
(2000)
Trends Biochem. Sci.
, vol.25
, pp. 381-388
-
-
Smith, C.W.1
Valcarcel, J.2
-
13
-
-
0032435862
-
Alternative splicing of pre-mRNA: Developmental consequences and mechanisms of regulation
-
Lopez,A.J. (1998) Alternative splicing of pre-mRNA: developmental consequences and mechanisms of regulation. Annu. Rev. Genet., 32, 279-305.
-
(1998)
Annu. Rev. Genet.
, vol.32
, pp. 279-305
-
-
Lopez, A.J.1
-
14
-
-
0036207384
-
Listening to silence and understanding nonsense: Exonic mutations that affect splicing
-
Cartegni,L., Chew,S.L. and Krainer,A.R. (2002) Listening to silence and understanding nonsense: exonic mutations that affect splicing. Nature Rev. Genet., 3, 285-298.
-
(2002)
Nature Rev. Genet.
, vol.3
, pp. 285-298
-
-
Cartegni, L.1
Chew, S.L.2
Krainer, A.R.3
-
15
-
-
0038401969
-
Role of the modular domains of SR proteins in subnuclear localization and alternative splicing specificity
-
Caceres,J.F., Misteli,T., Screaton,G.R., Spector,D.L. and Krainer,A.R. (1997) Role of the modular domains of SR proteins in subnuclear localization and alternative splicing specificity. J. Cell. Biol., 138, 225-238.
-
(1997)
J. Cell Biol.
, vol.138
, pp. 225-238
-
-
Caceres, J.F.1
Misteli, T.2
Screaton, G.R.3
Spector, D.L.4
Krainer, A.R.5
-
16
-
-
0032128255
-
Identification of functional exonic splicing enhancer motifs recognized by individual SR proteins
-
Liu,H.X., Zhang,M. and Krainer,A.R. (1998) Identification of functional exonic splicing enhancer motifs recognized by individual SR proteins. Genes Dev., 12, 1998-2012.
-
(1998)
Genes Dev.
, vol.12
, pp. 1998-2012
-
-
Liu, H.X.1
Zhang, M.2
Krainer, A.R.3
-
17
-
-
0031037690
-
Sequence-specific RNA binding by an SR protein requires RS domain phosphorylation: Creation of an SRp40-specific splicing enhancer
-
Tacke,R., Chen,Y. and Manley,J.L. (1997) Sequence-specific RNA binding by an SR protein requires RS domain phosphorylation: creation of an SRp40-specific splicing enhancer. Proc. Natl Acad. Sci. USA, 94, 1148-1153.
-
(1997)
Proc. Natl. Acad. Sci. USA
, vol.94
, pp. 1148-1153
-
-
Tacke, R.1
Chen, Y.2
Manley, J.L.3
-
18
-
-
0029064220
-
The human splicing factors ASF/SF2 and SC35 possess distinct, functionally significant RNA binding specificities
-
Tacke,R. and Manley,J.L. (1995) The human splicing factors ASF/SF2 and SC35 possess distinct, functionally significant RNA binding specificities. EMBO J., 14, 3540-3551.
-
(1995)
EMBO J.
, vol.14
, pp. 3540-3551
-
-
Tacke, R.1
Manley, J.L.2
-
19
-
-
0033015180
-
A novel hnRNPprotein (HAP/SAF-B) enters a subset of hnRNP complexes and relocates in nuclear granules in response to heat shock
-
Weighardt,F., Cobianchi,F., Cartegni,L., Chiodi,I., Villa,A., Riva,S. and Biamonti,G. (1999) A novel hnRNPprotein (HAP/SAF-B) enters a subset of hnRNP complexes and relocates in nuclear granules in response to heat shock. J. Cell. Sci., 112, 1465-1476.
-
(1999)
J. Cell Sci.
, vol.112
, pp. 1465-1476
-
-
Weighardt, F.1
Cobianchi, F.2
Cartegni, L.3
Chiodi, I.4
Villa, A.5
Riva, S.6
Biamonti, G.7
-
20
-
-
0026543785
-
Regulation of alternative pre-mRNA splicing by hnRNP A1 and splicing factor SF2
-
Mayeda,A. and Krainer,A.R. (1992) Regulation of alternative pre-mRNA splicing by hnRNP A1 and splicing factor SF2. Cell, 68, 365-375.
-
(1992)
Cell
, vol.68
, pp. 365-375
-
-
Mayeda, A.1
Krainer, A.R.2
-
21
-
-
0028077730
-
Regulation of alternative splicing in vivo by overexpression of antagonistic splicing factors
-
Caceres,J.F., Stamm,S., Helfman,D.M. and Krainer,A.R. (1994) Regulation of alternative splicing in vivo by overexpression of antagonistic splicing factors. Science, 265, 1706-1709.
-
(1994)
Science
, vol.265
, pp. 1706-1709
-
-
Caceres, J.F.1
Stamm, S.2
Helfman, D.M.3
Krainer, A.R.4
-
22
-
-
0028178987
-
The A1 and A1B proteins of heterogeneous nuclear ribonucleoparticles modulate 5′ splice site selection in vivo
-
Yang,X., Bani,M.R., Lu,S.J., Rowan,S., Ben-David,Y. and Chabot,B. (1994) The A1 and A1B proteins of heterogeneous nuclear ribonucleoparticles modulate 5′ splice site selection in vivo. Proc. Natl Acad. Sci. USA, 91, 6924-6928.
-
(1994)
Proc. Natl. Acad. Sci. USA
, vol.91
, pp. 6924-6928
-
-
Yang, X.1
Bani, M.R.2
Lu, S.J.3
Rowan, S.4
Ben-David, Y.5
Chabot, B.6
-
23
-
-
0028860944
-
The HCF repeat is an unusual proteolytic cleavage signal
-
Wilson,A.C., Peterson,M.G. and Herr,W. (1995) The HCF repeat is an unusual proteolytic cleavage signal. Genes Dev., 9, 2445-2458.
-
(1995)
Genes Dev.
, vol.9
, pp. 2445-2458
-
-
Wilson, A.C.1
Peterson, M.G.2
Herr, W.3
-
24
-
-
0032126647
-
DNA ligase I is recruited to sites of DNA replication by an interaction with proliferating cell nuclear antigen: Identification of a common targeting mechanism for the assembly of replication factories
-
Montecucco,A., Rossi,R., Levin,D.S., Gary,R., Park,M.S., Motycka,T.A., Ciaffocchi,G., Villa,A., Biamonti,G. and Tomkinson,A.E. (1998) DNA ligase I is recruited to sites of DNA replication by an interaction with proliferating cell nuclear antigen: identification of a common targeting mechanism for the assembly of replication factories. EMBO J., 17, 3786-3795.
-
(1998)
EMBO J.
, vol.17
, pp. 3786-3795
-
-
Montecucco, A.1
Rossi, R.2
Levin, D.S.3
Gary, R.4
Park, M.S.5
Motycka, T.A.6
Ciaffocchi, G.7
Villa, A.8
Biamonti, G.9
Tomkinson, A.E.10
-
25
-
-
0032534232
-
Altered expression of heterogenous nuclear ribonucleoproteins and SR factors in human colon adenocarcinomas
-
Ghigna,C., Moroni,M., Porta,C., Riva,S. and Biamonti,G. (1998) Altered expression of heterogenous nuclear ribonucleoproteins and SR factors in human colon adenocarcinomas. Cancer Res., 58, 5818-5824.
-
(1998)
Cancer Res.
, vol.58
, pp. 5818-5824
-
-
Ghigna, C.1
Moroni, M.2
Porta, C.3
Riva, S.4
Biamonti, G.5
-
26
-
-
0027494389
-
Functional domains of the human splicing factor ASF/SF2
-
Zuo,P. and Manley,J.L. (1993) Functional domains of the human splicing factor ASF/SF2. EMBO J., 12, 4727-4737.
-
(1993)
EMBO J.
, vol.12
, pp. 4727-4737
-
-
Zuo, P.1
Manley, J.L.2
-
27
-
-
0025221731
-
Crystal structure of the RNA-binding domain of the U1 small nuclear ribonucleoprotein A
-
Nagai,K., Oubridge,C., Jessen,T.H., Li,J. and Evans,P.R. (1990) Crystal structure of the RNA-binding domain of the U1 small nuclear ribonucleoprotein A. Nature, 348, 515-520.
-
(1990)
Nature
, vol.348
, pp. 515-520
-
-
Nagai, K.1
Oubridge, C.2
Jessen, T.H.3
Li, J.4
Evans, P.R.5
-
28
-
-
0026757694
-
Interaction of the RNA-binding domain of the hnRNP C proteins with RNA
-
Gorlach,M., Wittekind,M., Beckman,R.A., Mueller,L. and Dreyfuss,G. (1992) Interaction of the RNA-binding domain of the hnRNP C proteins with RNA. EMBO J., 11, 3289-3295.
-
(1992)
EMBO J.
, vol.11
, pp. 3289-3295
-
-
Gorlach, M.1
Wittekind, M.2
Beckman, R.A.3
Mueller, L.4
Dreyfuss, G.5
-
29
-
-
0027753933
-
Analysis of the RNA-recognition motif and RS and RGG domains: Conservation in metazoan pre-mRNA splicing factors
-
Birney,E., Kumar,S. and Krainer,A.R. (1993) Analysis of the RNA-recognition motif and RS and RGG domains: conservation in metazoan pre-mRNA splicing factors. Nucleic Acids Res., 21, 5803-5816.
-
(1993)
Nucleic Acids Res.
, vol.21
, pp. 5803-5816
-
-
Birney, E.1
Kumar, S.2
Krainer, A.R.3
-
30
-
-
0033557708
-
The splicing factor-associated protein, p32, regulates RNA splicing by inhibiting ASF/SF2 RNA binding and phosphorylation
-
Petersen-Mahrt,S.K., Estmer,C., Ohrmalm,C., Matthews,D.A., Russell,W.C. and Akusjarvi,G. (1999) The splicing factor-associated protein, p32, regulates RNA splicing by inhibiting ASF/SF2 RNA binding and phosphorylation. EMBO J., 18, 1014-1024.
-
(1999)
EMBO J.
, vol.18
, pp. 1014-1024
-
-
Petersen-Mahrt, S.K.1
Estmer, C.2
Ohrmalm, C.3
Matthews, D.A.4
Russell, W.C.5
Akusjarvi, G.6
-
31
-
-
0037066705
-
Human splicing factor ASF/SF2 encodes for a repressor domain required for its inhibitory activity on pre-mRNA splicing
-
Dauksaite,V. and Akusjarvi,G. (2002) Human splicing factor ASF/SF2 encodes for a repressor domain required for its inhibitory activity on pre-mRNA splicing. J. Biol. Chem., 277, 12579-12586.
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 12579-12586
-
-
Dauksaite, V.1
Akusjarvi, G.2
-
32
-
-
1342345246
-
Amplification of nuclear aldolase A in mouse cell mutants resistant to Hoechst 33342
-
Satou,W., Tanimoto,H., Ukekawa,R., Fujii,M. and Ayusawa,D. (2004) Amplification of nuclear aldolase A in mouse cell mutants resistant to Hoechst 33342. Biochem. Biophys. Res. Commun., 315, 845-849.
-
(2004)
Biochem. Biophys. Res. Commun.
, vol.315
, pp. 845-849
-
-
Satou, W.1
Tanimoto, H.2
Ukekawa, R.3
Fujii, M.4
Ayusawa, D.5
-
33
-
-
0035861647
-
Characterization of fortilin, a novel antiapoptotic protein
-
Li,F., Zhang,D. and Fujise,K. (2001) Characterization of fortilin, a novel antiapoptotic protein. J. Biol. Chem., 276, 47542-47549.
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 47542-47549
-
-
Li, F.1
Zhang, D.2
Fujise, K.3
-
34
-
-
0033920763
-
Localization of poly(A)-binding protein 2 (PABP2) in nuclear speckles is independent of import into the nucleus and requires binding to poly(A) RNA
-
Calado,A. and Carmo-Fonseca,M. (2000) Localization of poly(A)-binding protein 2 (PABP2) in nuclear speckles is independent of import into the nucleus and requires binding to poly(A) RNA. J. Cell. Sci., 113, 2309-2318.
-
(2000)
J. Cell Sci.
, vol.113
, pp. 2309-2318
-
-
Calado, A.1
Carmo-Fonseca, M.2
-
35
-
-
0036544654
-
Disruption of an SF2/ASF-dependent exonic splicing enhancer in SMN2 causes spinal muscular atrophy in the absence of SMN1
-
Cartegni,L. and Krainer,A.R. (2002) Disruption of an SF2/ASF-dependent exonic splicing enhancer in SMN2 causes spinal muscular atrophy in the absence of SMN1. Nature Genet., 30, 377-384.
-
(2002)
Nature Genet.
, vol.30
, pp. 377-384
-
-
Cartegni, L.1
Krainer, A.R.2
-
36
-
-
0029295349
-
Overexpression of the SR proteins ASF/SF2 and SC35 influences alternative splicing in vivo in diverse ways
-
Wang,J. and Manley,J.L. (1995) Overexpression of the SR proteins ASF/SF2 and SC35 influences alternative splicing in vivo in diverse ways. RNA, 1, 335-346.
-
(1995)
RNA
, vol.1
, pp. 335-346
-
-
Wang, J.1
Manley, J.L.2
-
37
-
-
0034671592
-
Role of SR protein modular domains in alternative splicing specificity in vivo
-
van Der Houven Van Oordt,W., Newton,K., Screaton,G.R. and Caceres,J.F. (2000) Role of SR protein modular domains in alternative splicing specificity in vivo. Nucleic Acids Res., 28, 4822-4831.
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 4822-4831
-
-
van Der Houven Van Oordt, W.1
Newton, K.2
Screaton, G.R.3
Caceres, J.F.4
-
38
-
-
0034472575
-
Structure and dynamics of hnRNP-labelled nuclear bodies induced by stress treatments
-
Chiodi,I., Biggiogera,M., Denegri,M., Corioni,M., Weighardt,F., Cobianchi,F., Riva,S. and Biamonti,G. (2000) Structure and dynamics of hnRNP-labelled nuclear bodies induced by stress treatments. J. Cell. Sci., 113, 4043-4053.
-
(2000)
J. Cell Sci.
, vol.113
, pp. 4043-4053
-
-
Chiodi, I.1
Biggiogera, M.2
Denegri, M.3
Corioni, M.4
Weighardt, F.5
Cobianchi, F.6
Riva, S.7
Biamonti, G.8
-
39
-
-
1842632326
-
A novel role for shuttling SR proteins in mRNA translation
-
Sanford,J.R., Gray,N.K., Beckmann,K. and Caceres,J.F. (2004) A novel role for shuttling SR proteins in mRNA translation. Genes Dev., 18, 755-768.
-
(2004)
Genes Dev.
, vol.18
, pp. 755-768
-
-
Sanford, J.R.1
Gray, N.K.2
Beckmann, K.3
Caceres, J.F.4
-
40
-
-
0042242582
-
ESEfinder: A web resource to identify exonic splicing enhancers
-
Cartegni,L., Wang,J., Zhu,Z., Zhang,M.Q. and Krainer,A.R. (2003) ESEfinder: a web resource to identify exonic splicing enhancers. Nucleic Acids Res., 31, 3568-3571.
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 3568-3571
-
-
Cartegni, L.1
Wang, J.2
Zhu, Z.3
Zhang, M.Q.4
Krainer, A.R.5
-
41
-
-
3242783149
-
The second RNA binding domain of human splicing factor ASF/SF2 is the critical domain controlling adenovirus E1A alternative 5′ splice site selection
-
Dauksaite,V. and Akusjarvi,G. (2004) The second RNA binding domain of human splicing factor ASF/SF2 is the critical domain controlling adenovirus E1A alternative 5′ splice site selection. Biochem. J., 381, 343-350.
-
(2004)
Biochem. J.
, vol.381
, pp. 343-350
-
-
Dauksaite, V.1
Akusjarvi, G.2
-
42
-
-
1142310938
-
Dephosphorylated SRp38 acts as a splicing repressor in response to heat shock
-
Shin,C., Feng,Y. and Manley,J.L. (2004) Dephosphorylated SRp38 acts as a splicing repressor in response to heat shock. Nature, 427, 553-558.
-
(2004)
Nature
, vol.427
, pp. 553-558
-
-
Shin, C.1
Feng, Y.2
Manley, J.L.3
|