-
1
-
-
4544292373
-
Diverse patterns of the tandem repeat organization in rye chromosomes
-
Alkhimova OG, Mazurok NA, Potapova TA, Zakian SM, Heslop-Harrison JS, Vershinin AV (2004) Diverse patterns of the tandem repeat organization in rye chromosomes. Chromosoma 113: 42-52.
-
(2004)
Chromosoma
, vol.113
, pp. 42-52
-
-
Alkhimova, O.G.1
Mazurok, N.A.2
Potapova, T.A.3
Zakian, S.M.4
Heslop-Harrison, J.S.5
Vershinin, A.V.6
-
2
-
-
0027316139
-
Gradual evolution of a specific satellite DNA family in Drosophila ambigua, D. tristis and D. obscura
-
Bachmann L, Sperlich D (1993) Gradual evolution of a specific satellite DNA family in Drosophila ambigua, D. tristis and D. obscura. Mol Biol Evol 10: 647-659.
-
(1993)
Mol Biol Evol
, vol.10
, pp. 647-659
-
-
Bachmann, L.1
Sperlich, D.2
-
3
-
-
18844453429
-
Molecular characterization and chromosomal distribution of Galileo, Kepler and Newton, three foldback transposable elements of the Drosophila buzzatii species complex
-
Casals F, Cáceres M, Manfrin MH, González J, Ruiz A (2005) Molecular characterization and chromosomal distribution of Galileo, Kepler and Newton, three foldback transposable elements of the Drosophila buzzatii species complex. Genetics 169: 2047-2059.
-
(2005)
Genetics
, vol.169
, pp. 2047-2059
-
-
Casals, F.1
Cáceres, M.2
Manfrin, M.H.3
González, J.4
Ruiz, A.5
-
4
-
-
0028108183
-
The evolutionary dynamics of repetitive DNA in eukaryotes
-
Charlesworth B, Sniegowski P, Stephan W (1994) The evolutionary dynamics of repetitive DNA in eukaryotes. Nature 371: 215-220.
-
(1994)
Nature
, vol.371
, pp. 215-220
-
-
Charlesworth, B.1
Sniegowski, P.2
Stephan, W.3
-
5
-
-
23344447972
-
Evidence for rolling circle replication of tandem genes in Drosophila
-
Cohen S, Agmon N, Yacobi K, Mislovati M, Segal D (2005) Evidence for rolling circle replication of tandem genes in Drosophila. Nucleic Acids Res 33: 4519-4526.
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 4519-4526
-
-
Cohen, S.1
Agmon, N.2
Yacobi, K.3
Mislovati, M.4
Segal, D.5
-
6
-
-
33751216131
-
Centromeres put epigenetics in the driver's seat
-
Dawe RK, Henikoff S (2006) Centromeres put epigenetics in the driver's seat. Trends Biochem Sci 31: 662-669.
-
(2006)
Trends Biochem Sci
, vol.31
, pp. 662-669
-
-
Dawe, R.K.1
Henikoff, S.2
-
7
-
-
0036620223
-
Mitochondrial DNA phylogeography of Brazilian populations of Drosophila buzzatii
-
de Brito RA, Manfrin MH, Sene FM (2002) Mitochondrial DNA phylogeography of Brazilian populations of Drosophila buzzatii. Genet Mol Biol 25: 161-171.
-
(2002)
Genet Mol Biol
, vol.25
, pp. 161-171
-
-
De Brito, R.A.1
Manfrin, M.H.2
Sene, F.M.3
-
8
-
-
0020478245
-
Molecular drive: A cohesive mode of species evolution
-
Dover GA (1982) Molecular drive: a cohesive mode of species evolution. Nature 299: 111-117.
-
(1982)
Nature
, vol.299
, pp. 111-117
-
-
Dover, G.A.1
-
9
-
-
34247899003
-
Finely orchestrated movements: Evolution of the ribosomal RNA genes
-
Eickbush TH, Eickbush DG (2007) Finely orchestrated movements: evolution of the ribosomal RNA genes. Genetics 175: 477-485.
-
(2007)
Genetics
, vol.175
, pp. 477-485
-
-
Eickbush, T.H.1
Eickbush, D.G.2
-
10
-
-
33750092265
-
Intra-specific variability and unusual organization of the repetitive units in a satellite DNA from Rana dalmatina: Molecular evidence of a new mechanism of DNA repair acting on satellite DNA
-
Feliciello I, Picariello O, Chinali G (2006) Intra-specific variability and unusual organization of the repetitive units in a satellite DNA from Rana dalmatina: molecular evidence of a new mechanism of DNA repair acting on satellite DNA. Gene 383: 81-92.
-
(2006)
Gene
, vol.383
, pp. 81-92
-
-
Feliciello, I.1
Picariello, O.2
Chinali, G.3
-
11
-
-
33845865543
-
Molecular characterization and genomic distribution of Isis: A new retrotransposon of Drosophila buzzatii
-
Guerreiro MP, Fontdevila A (2007) Molecular characterization and genomic distribution of Isis: a new retrotransposon of Drosophila buzzatii. Mol Genet Genomics 277: 83-95.
-
(2007)
Mol Genet Genomics
, vol.277
, pp. 83-95
-
-
Guerreiro, M.P.1
Fontdevila, A.2
-
12
-
-
25444495480
-
Differential rates of local and global homogenization in centromere satellites from Arabidopsis relatives
-
Hall SE, Luo S, Hall AE, Preuss D (2005) Differential rates of local and global homogenization in centromere satellites from Arabidopsis relatives. Genetics 170: 1913-1927.
-
(2005)
Genetics
, vol.170
, pp. 1913-1927
-
-
Hall, S.E.1
Luo, S.2
Hall, A.E.3
Preuss, D.4
-
14
-
-
0038523788
-
Tandemly repeated DNA sequences and centromeric chromosomal regions of Arabidopsis species
-
Heslop-Harrison JS, Brandes A, Schwarzacher T (2003) Tandemly repeated DNA sequences and centromeric chromosomal regions of Arabidopsis species. Chromosome Res 11: 241-253.
-
(2003)
Chromosome Res
, vol.11
, pp. 241-253
-
-
Heslop-Harrison, J.S.1
Brandes, A.2
Schwarzacher, T.3
-
15
-
-
34248157732
-
CENH3 interacts with the centromeric retrotransposon cereba and GC-rich satellites and locates to centromeric substructures in barley
-
Houben A, Schroeder-Reiter E, Nagaki K, Nasuda S, Wanner G et al. (2007) CENH3 interacts with the centromeric retrotransposon cereba and GC-rich satellites and locates to centromeric substructures in barley. Chromosoma 116: 275-283.
-
(2007)
Chromosoma
, vol.116
, pp. 275-283
-
-
Houben, A.1
Schroeder-Reiter, E.2
Nagaki, K.3
Nasuda, S.4
Wanner, G.5
-
16
-
-
0019296687
-
A simple method for estimating evolutionary rate of base substitution through comparative studies of nucleotide sequences
-
Kimura M (1980) A simple method for estimating evolutionary rate of base substitution through comparative studies of nucleotide sequences. J Mol Evol 16: 111-120.
-
(1980)
J Mol Evol
, vol.16
, pp. 111-120
-
-
Kimura, M.1
-
17
-
-
17044388159
-
Evolutionary turnover of two pBuM satellite DNA subfamilies in the Drosophila buzzatii cluster (repleta group): From alpha to alpha/beta arrays
-
Kuhn GCS, Sene FM (2005) Evolutionary turnover of two pBuM satellite DNA subfamilies in the Drosophila buzzatii cluster (repleta group): from alpha to alpha/beta arrays. Gene 349: 77-85.
-
(2005)
Gene
, vol.349
, pp. 77-85
-
-
Kuhn, G.C.S.1
Sene, F.M.2
-
19
-
-
34347382138
-
Low rates of homogenization of the DBC-150 satellite DNA family restricted to a single pair of microchromosomes in species from the Drosophila buzzatii cluster
-
Kuhn GCS, Franco FF, Manfrin MH, Moreira-Filho O, Sene FM (2007) Low rates of homogenization of the DBC-150 satellite DNA family restricted to a single pair of microchromosomes in species from the Drosophila buzzatii cluster. Chromosome Res 15: 457-469.
-
(2007)
Chromosome Res
, vol.15
, pp. 457-469
-
-
Kuhn, G.C.S.1
Franco, F.F.2
Manfrin, M.H.3
Moreira-Filho, O.4
Sene, F.M.5
-
20
-
-
0037735147
-
-
Arizona State University Tempe, Arizona, USA
-
Kumar S, Tamura K, Jakobsen IB, Nei M (2001) MEGA2: Molecular evolutionary genetics analysis software, Arizona State University, Tempe, Arizona, USA
-
(2001)
MEGA2: Molecular Evolutionary Genetics Analysis Software
-
-
Kumar, S.1
Tamura, K.2
Jakobsen, I.B.3
Nei, M.4
-
21
-
-
0037403681
-
Unisexuality and molecular drive: Bag320 sequence diversity in Bacillus taxa (Insecta Phasmatodea)
-
Luchetti A, Cesari M, Carrara G et al. (2003) Unisexuality and molecular drive: Bag320 sequence diversity in Bacillus taxa (Insecta Phasmatodea). J Mol Evol 56: 587-589.
-
(2003)
J Mol Evol
, vol.56
, pp. 587-589
-
-
Luchetti, A.1
Cesari, M.2
Carrara, G.3
-
22
-
-
33750381806
-
Sequence homogenization and chromosomal localization of VicTR-B satellites differ between closely related Vicia species
-
Macas J, Navratilova A, Koblizkova A (2006) Sequence homogenization and chromosomal localization of VicTR-B satellites differ between closely related Vicia species. Chromosoma 115: 437-447.
-
(2006)
Chromosoma
, vol.115
, pp. 437-447
-
-
MacAs, J.1
Navratilova, A.2
Koblizkova, A.3
-
23
-
-
33644512774
-
Cactophilic Drosophila in South America: A model for evolutionary studies
-
Manfrin MH, Sene FM (2006) Cactophilic Drosophila in South America: a model for evolutionary studies. Genetica 126: 1-19.
-
(2006)
Genetica
, vol.126
, pp. 1-19
-
-
Manfrin, M.H.1
Sene, F.M.2
-
24
-
-
34247163548
-
Population genetic study of allozyme variation in natural populations of Drosophila antonietae (Insecta, Diptera)
-
Mateus RP, Sene FM (2006) Population genetic study of allozyme variation in natural populations of Drosophila antonietae (Insecta, Diptera). J Zool Syst Evol Res 45: 136-143.
-
(2006)
J Zool Syst Evol Res
, vol.45
, pp. 136-143
-
-
Mateus, R.P.1
Sene, F.M.2
-
25
-
-
34247167124
-
Satellite DNA junctions identify the potential origin of new repetitive elements in the beetle Tribolium madens
-
Mravinac B, Plohl M (2007) Satellite DNA junctions identify the potential origin of new repetitive elements in the beetle Tribolium madens. Gene 394: 45-52.
-
(2007)
Gene
, vol.394
, pp. 45-52
-
-
Mravinac, B.1
Plohl, M.2
-
26
-
-
18844411896
-
Reduced rates of sequence evolution of Y-linked satellite DNA in Rumex (Polygonaceae)
-
Navajas-Pérez R, de la Herrán R, Jamilena M et al. (2005) Reduced rates of sequence evolution of Y-linked satellite DNA in Rumex (Polygonaceae). J Mol Evol 60: 391-399.
-
(2005)
J Mol Evol
, vol.60
, pp. 391-399
-
-
Navajas-Pérez, R.1
De La Herrán, R.2
Jamilena, M.3
-
27
-
-
11244260476
-
The effect of sequence divergence on recombination between direct repeats in Arabidopsis
-
Opperman R, Emmanuel E, Levy AA (2004) The effect of sequence divergence on recombination between direct repeats in Arabidopsis. Genetics 168: 2207-2215.
-
(2004)
Genetics
, vol.168
, pp. 2207-2215
-
-
Opperman, R.1
Emmanuel, E.2
Levy, A.A.3
-
28
-
-
0036445755
-
Higher-order organization and compartimentalization of satellite DNA PIM357 in species of the coleopteran genus Pimelia
-
7
-
Pons J, Juan C, Petitpierre E (2002) Higher-order organization and compartimentalization of satellite DNA PIM357 in species of the coleopteran genus Pimelia. Chromosome Res 10(7): 597-606.
-
(2002)
Chromosome Res
, vol.10
, pp. 597-606
-
-
Pons, J.1
Juan, C.2
Petitpierre, E.3
-
29
-
-
0021742268
-
The minimum amount of homology required for homologous recombination in mammalian cells
-
Rubnitz J, Subramani S (1984) The minimum amount of homology required for homologous recombination in mammalian cells. Mol Cell Biol 4: 2253-2258.
-
(1984)
Mol Cell Biol
, vol.4
, pp. 2253-2258
-
-
Rubnitz, J.1
Subramani, S.2
-
30
-
-
30044449656
-
The evolutionary dynamics of alpha-satellite
-
Rudd MK, Wray GA, Willard HF (2006) The evolutionary dynamics of alpha-satellite. Genome Res 16: 88-96.
-
(2006)
Genome Res
, vol.16
, pp. 88-96
-
-
Rudd, M.K.1
Wray, G.A.2
Willard, H.F.3
-
31
-
-
0023375195
-
The neighbor-joining method: A new method for reconstructing phylogenetic trees
-
Saitou N, Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4: 406-425.
-
(1987)
Mol Biol Evol
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
33
-
-
0031571606
-
Contiguous arrays of satellites 1,3, and β form a 1.5-Mb domain on chromosome 22p
-
Shiels C, Coutelle C, Huxley C (1997) Contiguous arrays of satellites 1,3, and β form a 1.5-Mb domain on chromosome 22p. Genomics 44: 35-44.
-
(1997)
Genomics
, vol.44
, pp. 35-44
-
-
Shiels, C.1
Coutelle, C.2
Huxley, C.3
-
34
-
-
0017294484
-
Evolution of repeated DNA sequences by unequal crossover
-
Smith GP (1976) Evolution of repeated DNA sequences by unequal crossover. Science 191: 528-535.
-
(1976)
Science
, vol.191
, pp. 528-535
-
-
Smith, G.P.1
-
35
-
-
0028140177
-
Possible role of natural selection in the formation of tandem-repetitive noncoding DNA
-
Stephan W, Cho S (1994) Possible role of natural selection in the formation of tandem-repetitive noncoding DNA. Genetics 136: 333-341.
-
(1994)
Genetics
, vol.136
, pp. 333-341
-
-
Stephan, W.1
Cho, S.2
-
36
-
-
0000439225
-
Transition stages of molecular drive in multiple-copy DNA families in Drosophila
-
Strachan T, Webb D, Dover G (1985) Transition stages of molecular drive in multiple-copy DNA families in Drosophila. EMBO J 4: 1701-1708.
-
(1985)
EMBO J
, vol.4
, pp. 1701-1708
-
-
Strachan, T.1
Webb, D.2
Dover, G.3
-
37
-
-
0027968068
-
CLUSTALW: Improving the sensitivity of progressive sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTALW: improving the sensitivity of progressive sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22: 4673-4680.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
38
-
-
27844475695
-
Functional elements residing within satellite DNAs
-
Ugarkovic D (2005) Functional elements residing within satellite DNAs. EMBO J 6: 1035-1039.
-
(2005)
EMBO J
, vol.6
, pp. 1035-1039
-
-
Ugarkovic, D.1
-
39
-
-
0037112912
-
Variation in satellite DNA profiles - Causes and effects
-
Ugarkovic D, Plohl M (2002) Variation in satellite DNA profiles - causes and effects. EMBO J 21: 5955-5959.
-
(2002)
EMBO J
, vol.21
, pp. 5955-5959
-
-
Ugarkovic, D.1
Plohl, M.2
-
40
-
-
0023297258
-
Persistence of tandem arrays: Implications for satellite and simple-sequence DNAs
-
Walsh JB (1987) Persistence of tandem arrays: implications for satellite and simple-sequence DNAs. Genetics 115: 553-567.
-
(1987)
Genetics
, vol.115
, pp. 553-567
-
-
Walsh, J.B.1
-
41
-
-
0039174046
-
Rapid duplication and loss of genes coding for the alpha chains of hemoglobin
-
Zimmer EA, Martin SL, Beverly SM, Kan YW, Wilson AC (1980) Rapid duplication and loss of genes coding for the alpha chains of hemoglobin. Proc Natl Acad Sci USA 77: 2158-2162.
-
(1980)
Proc Natl Acad Sci U S a
, vol.77
, pp. 2158-2162
-
-
Zimmer, E.A.1
Martin, S.L.2
Beverly, S.M.3
Kan, Y.W.4
Wilson, A.C.5
-
42
-
-
0034023156
-
A novel interspersed type of organization of satellite DNAs in Tribolium madens heterochromatin
-
3
-
Zinic SD, Ugarkovic D, Cornudella L, Plohl M (2000) A novel interspersed type of organization of satellite DNAs in Tribolium madens heterochromatin. Chromosome Res 8(3): 201-212.
-
(2000)
Chromosome Res
, vol.8
, pp. 201-212
-
-
Zinic, S.D.1
Ugarkovic, D.2
Cornudella, L.3
Plohl, M.4
|