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Volumn 394, Issue 1-2, 2007, Pages 45-52

Satellite DNA junctions identify the potential origin of new repetitive elements in the beetle Tribolium madens

Author keywords

Array junctions; Coleoptera; Concerted evolution; Heterochromatin; Higher order repeats; Satellite DNA

Indexed keywords

DNA FRAGMENT; GENOMIC DNA; MONOMER; NUCLEOTIDE; REPETITIVE DNA; SATELLITE DNA; SATELLITE DNA 1; SATELLITE DNA 2; UNCLASSIFIED DRUG;

EID: 34247167124     PISSN: 03781119     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.gene.2007.01.019     Document Type: Article
Times cited : (24)

References (33)
  • 1
    • 3142746644 scopus 로고    scopus 로고
    • A lineage-specific centromeric satellite sequence in the genus Trifolium
    • Ansari H.A., Ellison N.W., Griffiths A.G., and Williams W.M. A lineage-specific centromeric satellite sequence in the genus Trifolium. Chromosome Res. 12 (2004) 357-367
    • (2004) Chromosome Res. , vol.12 , pp. 357-367
    • Ansari, H.A.1    Ellison, N.W.2    Griffiths, A.G.3    Williams, W.M.4
  • 2
    • 0034601721 scopus 로고    scopus 로고
    • Molecular structure and evolution of DNA sequences located at the α-satellite boundary of chromosome 20
    • Bassi C., et al. Molecular structure and evolution of DNA sequences located at the α-satellite boundary of chromosome 20. Gene 256 (2000) 43-50
    • (2000) Gene , vol.256 , pp. 43-50
    • Bassi, C.1
  • 3
    • 0027299163 scopus 로고
    • Structure of the sequences adjacent to the centromeric alphoid satellite DNA array on the human Y chromosome
    • Cooper K.F., Fisher R.B., and Tyler-Smith C. Structure of the sequences adjacent to the centromeric alphoid satellite DNA array on the human Y chromosome. J. Mol. Biol. 230 (1993) 787-799
    • (1993) J. Mol. Biol. , vol.230 , pp. 787-799
    • Cooper, K.F.1    Fisher, R.B.2    Tyler-Smith, C.3
  • 4
    • 0345492218 scopus 로고
    • Molecular drive in multigene families: how biological novelties arise, spread and are assimilated
    • Dover G.A. Molecular drive in multigene families: how biological novelties arise, spread and are assimilated. Trends Genet. 2 (1986) 159-165
    • (1986) Trends Genet. , vol.2 , pp. 159-165
    • Dover, G.A.1
  • 5
    • 0036843291 scopus 로고    scopus 로고
    • Molecular drive
    • Dover G.A. Molecular drive. Trends Genet. 18 (2002) 587-589
    • (2002) Trends Genet. , vol.18 , pp. 587-589
    • Dover, G.A.1
  • 6
    • 0034023156 scopus 로고    scopus 로고
    • A novel interspersed type of organization of satellite DNAs in Tribolium madens heterochromatin
    • Durajlija-Žinić S., Ugarković D{stroke}., Cornudella L., and Plohl M. A novel interspersed type of organization of satellite DNAs in Tribolium madens heterochromatin. Chromosome Res. 8 (2000) 201-212
    • (2000) Chromosome Res. , vol.8 , pp. 201-212
    • Durajlija-Žinić, S.1    Ugarković, D.2    Cornudella, L.3    Plohl, M.4
  • 7
    • 0024756661 scopus 로고
    • Patterns of intra and interarray sequence variation in alpha satellite from the human X chromosome: evidence for short range homogenization of tandemly repeated DNA sequences
    • Durfy S.J., and Willard H.F. Patterns of intra and interarray sequence variation in alpha satellite from the human X chromosome: evidence for short range homogenization of tandemly repeated DNA sequences. Genomics 5 (1989) 810-821
    • (1989) Genomics , vol.5 , pp. 810-821
    • Durfy, S.J.1    Willard, H.F.2
  • 8
    • 0029360612 scopus 로고
    • Concerted evolution of repetitive DNA sequences in eukaryotes
    • Elder J.F., and Turner B.J. Concerted evolution of repetitive DNA sequences in eukaryotes. Q. Rev. Biol. 70 (1995) 297-320
    • (1995) Q. Rev. Biol. , vol.70 , pp. 297-320
    • Elder, J.F.1    Turner, B.J.2
  • 9
    • 0002051540 scopus 로고    scopus 로고
    • BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/08/NT
    • Hall T.A. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/08/NT. Nucleic Acids Symp. Ser. 41 (1999) 95-98
    • (1999) Nucleic Acids Symp. Ser. , vol.41 , pp. 95-98
    • Hall, T.A.1
  • 10
    • 0037316006 scopus 로고    scopus 로고
    • Centromere satellites from Arabidopsis populations: maintenance of conserved and variable regions
    • Hall S.E., Kettler G., and Preuss D. Centromere satellites from Arabidopsis populations: maintenance of conserved and variable regions. Genome Res. 13 (2003) 195-205
    • (2003) Genome Res. , vol.13 , pp. 195-205
    • Hall, S.E.1    Kettler, G.2    Preuss, D.3
  • 11
    • 25444495480 scopus 로고    scopus 로고
    • Differential rates of local and global homogenization in centromere satellites from Arabidopsis relatives
    • Hall S.E., Luo S., Hall A.E., and Preuss D. Differential rates of local and global homogenization in centromere satellites from Arabidopsis relatives. Genetics 170 (2005) 1913-1927
    • (2005) Genetics , vol.170 , pp. 1913-1927
    • Hall, S.E.1    Luo, S.2    Hall, A.E.3    Preuss, D.4
  • 12
    • 0038523788 scopus 로고    scopus 로고
    • Tandemly repeated DNA sequences and centromeric chromosomal regions of Arabidopsis species
    • Heslop-Harrison J.S., Brandes A., and Schwarzacher T. Tandemly repeated DNA sequences and centromeric chromosomal regions of Arabidopsis species. Chromosome Res. 11 (2003) 241-253
    • (2003) Chromosome Res. , vol.11 , pp. 241-253
    • Heslop-Harrison, J.S.1    Brandes, A.2    Schwarzacher, T.3
  • 13
    • 13744249479 scopus 로고    scopus 로고
    • Satellite DNA from the Y chromosome of the malaria vector Anopheles gambiae
    • Krzywinski J., Sangare D., and Besansky N. Satellite DNA from the Y chromosome of the malaria vector Anopheles gambiae. Genetics 169 (2005) 185-196
    • (2005) Genetics , vol.169 , pp. 185-196
    • Krzywinski, J.1    Sangare, D.2    Besansky, N.3
  • 14
    • 7544225450 scopus 로고    scopus 로고
    • Genomic dynamics of a low-copy-number satellite DNA family in Leptestheria dahalacensis (Crustacea, Branchiopoda, Conchostraca)
    • Luchetti A., Marino A., Scanabissi F., and Mantovani B. Genomic dynamics of a low-copy-number satellite DNA family in Leptestheria dahalacensis (Crustacea, Branchiopoda, Conchostraca). Gene 342 (2004) 313-320
    • (2004) Gene , vol.342 , pp. 313-320
    • Luchetti, A.1    Marino, A.2    Scanabissi, F.3    Mantovani, B.4
  • 15
    • 0033025139 scopus 로고    scopus 로고
    • Evolution of tandemly repeated sequences: what happens at the end of an array?
    • McAllister B.F., and Werren J.H. Evolution of tandemly repeated sequences: what happens at the end of an array?. J. Mol. Evol. 48 (1999) 469-481
    • (1999) J. Mol. Evol. , vol.48 , pp. 469-481
    • McAllister, B.F.1    Werren, J.H.2
  • 16
    • 0031903901 scopus 로고    scopus 로고
    • Evolution of satellite DNAs from the genus Palorus - experimental evidence for the "library" hypothesis
    • Meštrović N., Plohl M., Mravinac B., and Ugarković D{stroke}. Evolution of satellite DNAs from the genus Palorus - experimental evidence for the "library" hypothesis. Mol. Biol. Evol. 15 (1998) 1062-1068
    • (1998) Mol. Biol. Evol. , vol.15 , pp. 1062-1068
    • Meštrović, N.1    Plohl, M.2    Mravinac, B.3    Ugarković, D.4
  • 17
    • 19944423818 scopus 로고    scopus 로고
    • Long inversely oriented subunits form a complex monomer of Tribolium brevicornis satellite DNA
    • Mravinac B., Ugarković D{stroke}., Franjević D., and Plohl M. Long inversely oriented subunits form a complex monomer of Tribolium brevicornis satellite DNA. J. Mol. Evol. 60 (2005) 513-525
    • (2005) J. Mol. Evol. , vol.60 , pp. 513-525
    • Mravinac, B.1    Ugarković, D.2    Franjević, D.3    Plohl, M.4
  • 18
    • 0035051542 scopus 로고    scopus 로고
    • Mutation and recombination in cattle satellite DNA: a feedback model for the evolution of satellite DNA repeats
    • Nijman I.J., and Lenstra J.A. Mutation and recombination in cattle satellite DNA: a feedback model for the evolution of satellite DNA repeats. J. Mol. Evol. 52 (2001) 361-371
    • (2001) J. Mol. Evol. , vol.52 , pp. 361-371
    • Nijman, I.J.1    Lenstra, J.A.2
  • 19
    • 28244460337 scopus 로고    scopus 로고
    • Sequence divergence and conservation in organizationally distinct subfamilies of Donax trunculus satellite DNA
    • Petrović V., and Plohl M. Sequence divergence and conservation in organizationally distinct subfamilies of Donax trunculus satellite DNA. Gene 362 (2005) 37-43
    • (2005) Gene , vol.362 , pp. 37-43
    • Petrović, V.1    Plohl, M.2
  • 20
    • 2542455157 scopus 로고    scopus 로고
    • Complex structural features of satellite DNA sequences in the genus Pimelia (Coleoptera: Tenebrionidae): random differential amplification from a common "satellite DNA library"
    • Pons J., Bruvo B., Petitpierre E., Plohl M., Ugarković D{stroke}., and Juan C. Complex structural features of satellite DNA sequences in the genus Pimelia (Coleoptera: Tenebrionidae): random differential amplification from a common "satellite DNA library". Heredity 92 (2004) 418-427
    • (2004) Heredity , vol.92 , pp. 418-427
    • Pons, J.1    Bruvo, B.2    Petitpierre, E.3    Plohl, M.4    Ugarković, D.5    Juan, C.6
  • 21
    • 0028294262 scopus 로고
    • Junctions between repetitive DNAs on the PSR chromosome of Naisonia vitripennis: association of palindromes with recombination
    • Reed K.M., Beukeboom L.W., Eickbush D.G., and Werren J.H. Junctions between repetitive DNAs on the PSR chromosome of Naisonia vitripennis: association of palindromes with recombination. J. Mol. Evol. 38 (1994) 352-362
    • (1994) J. Mol. Evol. , vol.38 , pp. 352-362
    • Reed, K.M.1    Beukeboom, L.W.2    Eickbush, D.G.3    Werren, J.H.4
  • 22
    • 0032972599 scopus 로고    scopus 로고
    • DnaSP version 3: an integrated program for molecular population genetics and molecular evolution analysis
    • Rozas J., and Rozas R. DnaSP version 3: an integrated program for molecular population genetics and molecular evolution analysis. Bioinformatics 15 (1999) 174-175
    • (1999) Bioinformatics , vol.15 , pp. 174-175
    • Rozas, J.1    Rozas, R.2
  • 25
    • 0031571606 scopus 로고    scopus 로고
    • Contiguous arrays of satellites 1, 3, and β form a 1.5 Mb domain on chromosome 22p
    • Shiels C.C., Coutelle C., and Huxley C. Contiguous arrays of satellites 1, 3, and β form a 1.5 Mb domain on chromosome 22p. Genomics 44 (1997) 35-44
    • (1997) Genomics , vol.44 , pp. 35-44
    • Shiels, C.C.1    Coutelle, C.2    Huxley, C.3
  • 26
    • 0017294484 scopus 로고
    • Evolution of repeated DNA sequences by unequal crossover
    • Smith G.P. Evolution of repeated DNA sequences by unequal crossover. Science 191 (1976) 528-535
    • (1976) Science , vol.191 , pp. 528-535
    • Smith, G.P.1
  • 27
    • 0023268789 scopus 로고
    • Quantitative variation and chromosomal location of satellite DNAs
    • Stephan W. Quantitative variation and chromosomal location of satellite DNAs. Genet. Res. 50 (1989) 41-52
    • (1989) Genet. Res. , vol.50 , pp. 41-52
    • Stephan, W.1
  • 28
    • 0037318262 scopus 로고    scopus 로고
    • Sequence analysis of a functional Drosophila centromere
    • Sun X., Le H.D., Wahlstrom J.M., and Karpen G.H. Sequence analysis of a functional Drosophila centromere. Genome Res. 13 (2003) 182-194
    • (2003) Genome Res. , vol.13 , pp. 182-194
    • Sun, X.1    Le, H.D.2    Wahlstrom, J.M.3    Karpen, G.H.4
  • 30
    • 0031574072 scopus 로고    scopus 로고
    • The clustal X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson J.D., Gibson T.J., Plewniak F., Jeanmougin F., and Higgins D.G. The clustal X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 24 (1997) 4876-4882
    • (1997) Nucleic Acids Res. , vol.24 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 31
    • 0029996327 scopus 로고    scopus 로고
    • Evolution of Tribolium madens (Insecta, Coleoptera) satellite DNA through DNA inversion and insertion
    • Ugarković D{stroke}., Durajlija S., and Plohl M. Evolution of Tribolium madens (Insecta, Coleoptera) satellite DNA through DNA inversion and insertion. J. Mol. Evol. 42 (1996) 350-358
    • (1996) J. Mol. Evol. , vol.42 , pp. 350-358
    • Ugarković, D.1    Durajlija, S.2    Plohl, M.3
  • 32
    • 0027454554 scopus 로고
    • Nonrandom localization of recombination events in human alpha satellite repeat unit variants: implications for higher-order structural characteristics within centromeric heterochromatin
    • Warburton P.E., Waye J.S., and Willard H.F. Nonrandom localization of recombination events in human alpha satellite repeat unit variants: implications for higher-order structural characteristics within centromeric heterochromatin. Mol. Cell. Biol. 13 (1993) 6520-6529
    • (1993) Mol. Cell. Biol. , vol.13 , pp. 6520-6529
    • Warburton, P.E.1    Waye, J.S.2    Willard, H.F.3
  • 33
    • 0023224740 scopus 로고
    • Hierarchical order in chromosome-specific human α-satellite DNA
    • Willard H.F., and Waye J.S. Hierarchical order in chromosome-specific human α-satellite DNA. Trends Genet. 3 (1987) 192-198
    • (1987) Trends Genet. , vol.3 , pp. 192-198
    • Willard, H.F.1    Waye, J.S.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.