메뉴 건너뛰기




Volumn 19, Issue 4, 2007, Pages 254-269

Genetic diversity of infectious hematopoietic necrosis virus from Feather River and Lake Oroville, California, and virulence of selected isolates for Chinook salmon and rainbow trout

Author keywords

[No Author keywords available]

Indexed keywords

GLYCOPROTEIN; VIRUS ANTIBODY;

EID: 39749158674     PISSN: 08997659     EISSN: 15488667     Source Type: Journal    
DOI: 10.1577/H07-003.1     Document Type: Article
Times cited : (10)

References (53)
  • 2
    • 0034450572 scopus 로고    scopus 로고
    • Molecular epidemiology reveals emergence of a virulent infectious hematopoietic necrosis (IHN) virus strain in wild salmon and transmission to hatchery fish
    • Anderson, E. D., H. M. Engelking, E. J. Emmenegger, and G. Kurath. 2000. Molecular epidemiology reveals emergence of a virulent infectious hematopoietic necrosis (IHN) virus strain in wild salmon and transmission to hatchery fish. Journal of Aquatic Animal Health 12:85-99.
    • (2000) Journal of Aquatic Animal Health , vol.12 , pp. 85-99
    • Anderson, E.D.1    Engelking, H.M.2    Emmenegger, E.J.3    Kurath, G.4
  • 3
    • 0001545637 scopus 로고
    • Biochemical and antigenic properties of the first isolates of infectious hematopoietic necrosis virus from salmonid fish in Europe
    • Arkush, K. D., G. Bovo, P. de Kinkelin, J. R. Winton, W. H. Wingfield, and R. P. Hedrick. 1989. Biochemical and antigenic properties of the first isolates of infectious hematopoietic necrosis virus from salmonid fish in Europe. Journal of Aquatic Animal Health 1:148-153.
    • (1989) Journal of Aquatic Animal Health , vol.1 , pp. 148-153
    • Arkush, K.D.1    Bovo, G.2    de Kinkelin, P.3    Winton, J.R.4    Wingfield, W.H.5    Hedrick, R.P.6
  • 4
    • 4344580618 scopus 로고    scopus 로고
    • Susceptibility of captive adult winter-run Chinook salmon Oncorhynchus tshawytscha to waterborne exposures with infectious hematopoietic necrosis virus (IHNV)
    • Arkush, K. D., H. L. Mendonca, A. M. McBride, and R. P. Hedrick. 2004. Susceptibility of captive adult winter-run Chinook salmon Oncorhynchus tshawytscha to waterborne exposures with infectious hematopoietic necrosis virus (IHNV). Diseases of Aquatic Organisms 59:211-216.
    • (2004) Diseases of Aquatic Organisms , vol.59 , pp. 211-216
    • Arkush, K.D.1    Mendonca, H.L.2    McBride, A.M.3    Hedrick, R.P.4
  • 6
    • 0019311025 scopus 로고
    • Plaquing procedure for infectious hematopoietic necrosis virus
    • Burke, J. A., and D. Mulcahy. 1980. Plaquing procedure for infectious hematopoietic necrosis virus. Applied and Environmental Microbiology 39:872-876.
    • (1980) Applied and Environmental Microbiology , vol.39 , pp. 872-876
    • Burke, J.A.1    Mulcahy, D.2
  • 7
    • 0010284446 scopus 로고
    • The occurrence of viral infections of fish in Taiwan
    • A. E. Ellis, editor, Academic Press, New York
    • Chen, S. N., G. H. Kou, R. P. Hedrick, and J. L. Fryer. 1985. The occurrence of viral infections of fish in Taiwan. Pages 313-319 in A. E. Ellis, editor. Fish and Shellfish Pathology. Academic Press, New York.
    • (1985) Fish and Shellfish Pathology , pp. 313-319
    • Chen, S.N.1    Kou, G.H.2    Hedrick, R.P.3    Fryer, J.L.4
  • 9
    • 0034690281 scopus 로고    scopus 로고
    • Genetic diversity and epidemiology of infectious hematopoietic necrosis virus in Alaska
    • Emmenegger, E. J., T. R. Meyers, T. O. Burton, and G. Kurath. 2000. Genetic diversity and epidemiology of infectious hematopoietic necrosis virus in Alaska. Diseases of Aquatic Organisms 40:163-176.
    • (2000) Diseases of Aquatic Organisms , vol.40 , pp. 163-176
    • Emmenegger, E.J.1    Meyers, T.R.2    Burton, T.O.3    Kurath, G.4
  • 10
    • 0036201823 scopus 로고    scopus 로고
    • Genetic characterization of infectious hematopoietic necrosis virus of coastal salmonid stocks in Washington State
    • Emmenegger, E. J., and G. Kurath. 2002. Genetic characterization of infectious hematopoietic necrosis virus of coastal salmonid stocks in Washington State. Journal of Aquatic Animal Health 14:25-34.
    • (2002) Journal of Aquatic Animal Health , vol.14 , pp. 25-34
    • Emmenegger, E.J.1    Kurath, G.2
  • 11
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein, J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 12
    • 0020584529 scopus 로고    scopus 로고
    • Fijan, N., Crossed D sign. Sulimanovíc, M. Bearzotti, D. Muîziníc, L. O. Zwillenberg, S. Chilmonczyk, J. F. Vautherot, and P. de Kinkelin. 1983. Some properties of the epithelium papulosum cyprini (EPC) cell line from carp Cyprinus carpio. Annales de l'Institut Pasteur Virologie 134:207-220.
    • Fijan, N., Crossed D sign. Sulimanovíc, M. Bearzotti, D. Muîziníc, L. O. Zwillenberg, S. Chilmonczyk, J. F. Vautherot, and P. de Kinkelin. 1983. Some properties of the epithelium papulosum cyprini (EPC) cell line from carp Cyprinus carpio. Annales de l'Institut Pasteur Virologie 134:207-220.
  • 13
    • 0042641658 scopus 로고    scopus 로고
    • Two distinct phylogenetic clades of infectious hematopoietic necrosis virus overlap within the Columbia River basin
    • Garver, K. A., R. M. Troyer, and G. Kurath. 2003. Two distinct phylogenetic clades of infectious hematopoietic necrosis virus overlap within the Columbia River basin. Diseases of Aquatic Organisms 55:187-203.
    • (2003) Diseases of Aquatic Organisms , vol.55 , pp. 187-203
    • Garver, K.A.1    Troyer, R.M.2    Kurath, G.3
  • 15
    • 0026562079 scopus 로고
    • The number of replications needed for accurate estimation of the bootstrap P value in phylogenetic studies
    • Hedges, S. B. 1992. The number of replications needed for accurate estimation of the bootstrap P value in phylogenetic studies. Molecular Biology and Evolution 9:366-369.
    • (1992) Molecular Biology and Evolution , vol.9 , pp. 366-369
    • Hedges, S.B.1
  • 16
    • 12044253190 scopus 로고
    • An empirical test of bootstrapping as a method for assessing confidence in phylogenetic analysis
    • Hillis, D. M., and J. J. Bull. 1993. An empirical test of bootstrapping as a method for assessing confidence in phylogenetic analysis. Systematic Biology 42:182-192.
    • (1993) Systematic Biology , vol.42 , pp. 182-192
    • Hillis, D.M.1    Bull, J.J.2
  • 17
    • 0023027121 scopus 로고
    • Occurrence of different types of infectious hematopoietic necrosis virus in fish
    • Hsu, Y. L., H. M. Engelking, and J. C. Leong. 1986. Occurrence of different types of infectious hematopoietic necrosis virus in fish. Applied and Environmental Microbiology 52:1353-1361.
    • (1986) Applied and Environmental Microbiology , vol.52 , pp. 1353-1361
    • Hsu, Y.L.1    Engelking, H.M.2    Leong, J.C.3
  • 18
    • 0030478822 scopus 로고    scopus 로고
    • Mapping the neutralizing epitopes on the glycoprotein of infectious haematopoietic necrosis virus, a fish rhabdovirus
    • Huang, C., M. S. Chien, M. Landolt, W. Batts, and J. R. Winton. 1996. Mapping the neutralizing epitopes on the glycoprotein of infectious haematopoietic necrosis virus, a fish rhabdovirus. Journal of General Virology 77:3033-3040.
    • (1996) Journal of General Virology , vol.77 , pp. 3033-3040
    • Huang, C.1    Chien, M.S.2    Landolt, M.3    Batts, W.4    Winton, J.R.5
  • 20
    • 0003410183 scopus 로고
    • IUBMB International Union of Biochemistry and Molecular Biology, Academic Press, San Diego, California
    • IUBMB (International Union of Biochemistry and Molecular Biology). 1992. Enzyme nomenclature 1992. Academic Press, San Diego, California.
    • (1992) Enzyme nomenclature 1992
  • 21
    • 0036147047 scopus 로고    scopus 로고
    • Rates of molecular evolution in RNA viruses: A quantitative phylogenetic analysis
    • Jenkins, G. M., A. Rambaut, O. G. Pybus, and E. C. Holmes. 2002. Rates of molecular evolution in RNA viruses: a quantitative phylogenetic analysis. Journal of Molecular Evolution 54:156-165.
    • (2002) Journal of Molecular Evolution , vol.54 , pp. 156-165
    • Jenkins, G.M.1    Rambaut, A.2    Pybus, O.G.3    Holmes, E.C.4
  • 22
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rate of base substitutions through comparative studies of nucleotide sequences
    • Kimura, M. 1980. A simple method for estimating evolutionary rate of base substitutions through comparative studies of nucleotide sequences. Journal of Molecular Evolution 16:111-120.
    • (1980) Journal of Molecular Evolution , vol.16 , pp. 111-120
    • Kimura, M.1
  • 23
    • 0036139211 scopus 로고    scopus 로고
    • MEGA2: Molecular evolutionary genetics analysis software
    • Kumar, S., K. Tamura, I. B. Jakobsen, and M. Nei. 2001. MEGA2: molecular evolutionary genetics analysis software. Bioinformatics 17:1244-1245.
    • (2001) Bioinformatics , vol.17 , pp. 1244-1245
    • Kumar, S.1    Tamura, K.2    Jakobsen, I.B.3    Nei, M.4
  • 25
    • 0021914754 scopus 로고
    • Molecular cloning of the six mRNA species of infectious hematopoietic necrosis virus, a fish rhabdovirus, and gene order determination by R-loop mapping
    • Kurath, G., K. G. Ahem, G. D. Pearson, and J. C. Leong. 1985. Molecular cloning of the six mRNA species of infectious hematopoietic necrosis virus, a fish rhabdovirus, and gene order determination by R-loop mapping. Journal of Virology 53:469-476.
    • (1985) Journal of Virology , vol.53 , pp. 469-476
    • Kurath, G.1    Ahem, K.G.2    Pearson, G.D.3    Leong, J.C.4
  • 26
    • 0021732153 scopus 로고
    • Fish cell lines: Establishment and characterization of nine cell lines from salmonids
    • Lannan, C. N., J. R. Winton, and J. L. Fryer. 1984. Fish cell lines: establishment and characterization of nine cell lines from salmonids. In Vitro 20:671-676.
    • (1984) In Vitro , vol.20 , pp. 671-676
    • Lannan, C.N.1    Winton, J.R.2    Fryer, J.L.3
  • 27
    • 39749102445 scopus 로고    scopus 로고
    • LaPatra, S. E. 2004. General procedures for virology. In American Fisheries Society Fish Health Section. FHS blue book: suggested procedures for the detection and identification of certain finfish and shellfish pathogens, 2004 edition. American Fisheries Society, Fish Health Section, Bethesda, Maryland.
    • LaPatra, S. E. 2004. General procedures for virology. In American Fisheries Society Fish Health Section. FHS blue book: suggested procedures for the detection and identification of certain finfish and shellfish pathogens, 2004 edition. American Fisheries Society, Fish Health Section, Bethesda, Maryland.
  • 28
    • 0031811207 scopus 로고    scopus 로고
    • Factors affecting pathogenicity of infectious hematopoietic necrosis virus (IHNV) for salmonid fish
    • LaPatra, S. E. 1998. Factors affecting pathogenicity of infectious hematopoietic necrosis virus (IHNV) for salmonid fish. Journal of Aquatic Animal Health 10:121-131.
    • (1998) Journal of Aquatic Animal Health , vol.10 , pp. 121-131
    • LaPatra, S.E.1
  • 29
    • 0028250038 scopus 로고
    • Antigenic variants of infectious hematopoietic necrosis virus and implications for vaccine development
    • LaPatra, S. E., K. A. Lauda, and G. R. Jones. 1994. Antigenic variants of infectious hematopoietic necrosis virus and implications for vaccine development. Diseases of Aquatic Organisms 20:119-126.
    • (1994) Diseases of Aquatic Organisms , vol.20 , pp. 119-126
    • LaPatra, S.E.1    Lauda, K.A.2    Jones, G.R.3
  • 30
    • 39749197555 scopus 로고
    • Beyond ANOVA: Basics of Applied Statistics. Wiley, New York
    • Miller, R. G., Jr. 1986. . Pages 56-63 in Beyond ANOVA: Basics of Applied Statistics. Wiley, New York.
    • (1986) Pages 56-63
    • Miller Jr., R.G.1
  • 31
    • 0028882375 scopus 로고
    • The complete genome structure and phylogenetic relationship of infectious hematopoietic necrosis virus
    • Morzunov, S. P., J. R. Winton, and S. T. Nichol. 1995. The complete genome structure and phylogenetic relationship of infectious hematopoietic necrosis virus. Virus Research 38:175-192.
    • (1995) Virus Research , vol.38 , pp. 175-192
    • Morzunov, S.P.1    Winton, J.R.2    Nichol, S.T.3
  • 32
    • 0021318545 scopus 로고
    • Appearance and quantification of infectious hematopoietic necrosis virus in female sockeye salmon (Oncorhynchus nerka) during their spawning migration
    • Mulcahy, D., C. K. Jenes, and R. Pascho. 1984. Appearance and quantification of infectious hematopoietic necrosis virus in female sockeye salmon (Oncorhynchus nerka) during their spawning migration. Archives of Virology 80:171-181.
    • (1984) Archives of Virology , vol.80 , pp. 171-181
    • Mulcahy, D.1    Jenes, C.K.2    Pascho, R.3
  • 34
    • 0022507362 scopus 로고
    • Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions
    • Nei, M., and T. Gojobori. 1986. Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions. Molecular Biology and Evolution 3:418-426.
    • (1986) Molecular Biology and Evolution , vol.3 , pp. 418-426
    • Nei, M.1    Gojobori, T.2
  • 35
    • 0028787115 scopus 로고
    • Molecular epizootiology and evolution of the glycoprotein and non-virion protein genes of infectious hematopoietic necrosis virus, a fish rhabdovirus
    • Nichol, S. T., J. E. Rowe, and J. R. Winton. 1995. Molecular epizootiology and evolution of the glycoprotein and non-virion protein genes of infectious hematopoietic necrosis virus, a fish rhabdovirus. Virus Research 38:159-173.
    • (1995) Virus Research , vol.38 , pp. 159-173
    • Nichol, S.T.1    Rowe, J.E.2    Winton, J.R.3
  • 39
    • 0013845283 scopus 로고
    • Virus diseases of the Salmonidae in western United States I: Etiology and epizootiology
    • Parisot, T. J., W. T. Yasutake, and G. W. Klontz. 1965. Virus diseases of the Salmonidae in western United States I: etiology and epizootiology. Annals of the New York Academy of Sciences 126:502-519.
    • (1965) Annals of the New York Academy of Sciences , vol.126 , pp. 502-519
    • Parisot, T.J.1    Yasutake, W.T.2    Klontz, G.W.3
  • 40
    • 0000781719 scopus 로고
    • Development of monoclonal antibodies that recognize a type-2 specific and a common epitope on the nucleoprotein of infectious hematopoietic necrosis virus
    • Ristow, S. S., and J. M. Amzen. 1989. Development of monoclonal antibodies that recognize a type-2 specific and a common epitope on the nucleoprotein of infectious hematopoietic necrosis virus. Journal of Aquatic Animal Health 1:119-125.
    • (1989) Journal of Aquatic Animal Health , vol.1 , pp. 119-125
    • Ristow, S.S.1    Amzen, J.M.2
  • 41
    • 0001236415 scopus 로고
    • Monoclonal antibodies to the glycoprotein and nucleoprotein of infectious hematopoietic necrosis virus (IHNV) reveal differences among isolates of the virus by fluorescence, neutralization, and electrophoresis
    • Ristow, S. S., and J. Amzen de Avila. 1991. Monoclonal antibodies to the glycoprotein and nucleoprotein of infectious hematopoietic necrosis virus (IHNV) reveal differences among isolates of the virus by fluorescence, neutralization, and electrophoresis. Diseases of Aquatic Organisms 11:105-115.
    • (1991) Diseases of Aquatic Organisms , vol.11 , pp. 105-115
    • Ristow, S.S.1    Amzen de Avila, J.2
  • 42
    • 39749201075 scopus 로고    scopus 로고
    • Rovozzo, G. C., and C. N. Burke. 1973. Page 97 in A Manual of Basic Virological Techniques. Prentice-Hall Englewood Cliffs, New Jersey.
    • Rovozzo, G. C., and C. N. Burke. 1973. Page 97 in A Manual of Basic Virological Techniques. Prentice-Hall Englewood Cliffs, New Jersey.
  • 43
    • 0032972599 scopus 로고    scopus 로고
    • DnaSP version 3: An integrated program for molecular population genetics and molecular evolution analysis
    • Rozas, J., and R. Rozas. 1999. DnaSP version 3: an integrated program for molecular population genetics and molecular evolution analysis. Bioinformatics 15:174-175.
    • (1999) Bioinformatics , vol.15 , pp. 174-175
    • Rozas, J.1    Rozas, R.2
  • 45
    • 84998217083 scopus 로고
    • Viral diseases of cultured fishes in Japan
    • Sano, T. 1976. Viral diseases of cultured fishes in Japan. Fish Pathology 10:221-226.
    • (1976) Fish Pathology , vol.10 , pp. 221-226
    • Sano, T.1
  • 46
    • 0029095624 scopus 로고
    • Natural selection on the gag, pol, and env genes of human immunodeficiency virus 1 (HIV-1)
    • Seibert, S. A., C. Y. Howell, M. K. Hughes, and A. L. Hughes. 1995. Natural selection on the gag, pol, and env genes of human immunodeficiency virus 1 (HIV-1). Molecular Biology and Evolution 12:803-813.
    • (1995) Molecular Biology and Evolution , vol.12 , pp. 803-813
    • Seibert, S.A.1    Howell, C.Y.2    Hughes, M.K.3    Hughes, A.L.4
  • 47
    • 39749092632 scopus 로고    scopus 로고
    • Swofford, D. L. 2000. PAUP*: Phylogenetic Analysis using Parsimony * and other methods, Version 4. Sinauer Associates. Sunderland, Massachusetts
    • Swofford, D. L. 2000. PAUP*: Phylogenetic Analysis using Parsimony (* and other methods). Version 4. Sinauer Associates. Sunderland, Massachusetts.
  • 48
    • 39749177278 scopus 로고    scopus 로고
    • Tordo, N., A. Benmansour, C. Calisher, R. G. Dietzgen, R.-X. Fang, A. O. Jackson, G. Kurath, S. Nadin-Davies, R. B. Tesh, and P. J. Walker, 2005. Family Rhabdoviridae. Pages 623-644 in C. M. Fauquet, M. A. Mayo, J. Maniloff, U. Desselberger, and L. A. Ball, editors. Virus taxonomy: classification and nomenclature of viruses. Eighth report of the International Committee for the Taxonomy of Viruses. Elsevier Academic Press, San Diego, California.
    • Tordo, N., A. Benmansour, C. Calisher, R. G. Dietzgen, R.-X. Fang, A. O. Jackson, G. Kurath, S. Nadin-Davies, R. B. Tesh, and P. J. Walker, 2005. Family Rhabdoviridae. Pages 623-644 in C. M. Fauquet, M. A. Mayo, J. Maniloff, U. Desselberger, and L. A. Ball, editors. Virus taxonomy: classification and nomenclature of viruses. Eighth report of the International Committee for the Taxonomy of Viruses. Elsevier Academic Press, San Diego, California.
  • 49
    • 0041639719 scopus 로고    scopus 로고
    • Molecular epidemiology of infectious hematopoietic necrosis virus reveals complex virus traffic and evolution within southern Idaho aquaculture
    • Troyer, R. M., and G. Kurath. 2003. Molecular epidemiology of infectious hematopoietic necrosis virus reveals complex virus traffic and evolution within southern Idaho aquaculture. Diseases of Aquatic Organisms 55:175-185.
    • (2003) Diseases of Aquatic Organisms , vol.55 , pp. 175-185
    • Troyer, R.M.1    Kurath, G.2
  • 50
    • 0034532064 scopus 로고    scopus 로고
    • Genetic analyses reveal unusually high diversity of infectious haematopoietic necrosis virus in rainbow trout aquaculture
    • Troyer, R. M., S. E. LaPatra, and G. Kurath. 2000. Genetic analyses reveal unusually high diversity of infectious haematopoietic necrosis virus in rainbow trout aquaculture. Journal of General Virology 81:2823-2832.
    • (2000) Journal of General Virology , vol.81 , pp. 2823-2832
    • Troyer, R.M.1    LaPatra, S.E.2    Kurath, G.3
  • 51
    • 39749157234 scopus 로고    scopus 로고
    • Wingfield, W. H., and L. D. Chan. 1970. Studies on the Sacramento River Chinook disease and its causative agent. In S. F. Snieszko, editor. A symposium on diseases of fish and shellfishes, Washington, D.C. American Fisheries Society Special Publication 5:307-318.
    • Wingfield, W. H., and L. D. Chan. 1970. Studies on the Sacramento River Chinook disease and its causative agent. In S. F. Snieszko, editor. A symposium on diseases of fish and shellfishes, Washington, D.C. American Fisheries Society Special Publication 5:307-318.
  • 52
    • 0000006567 scopus 로고
    • Neutralizing monoclonal antibodies recognize antigenic variants among isolates of infectious hematopoietic necrosis virus
    • Winton, J. R., C. K. Arakawa, C. N. Lannan, and J. L. Fryer. 1988. Neutralizing monoclonal antibodies recognize antigenic variants among isolates of infectious hematopoietic necrosis virus. Diseases of Aquatic Organisms 4:199-204.
    • (1988) Diseases of Aquatic Organisms , vol.4 , pp. 199-204
    • Winton, J.R.1    Arakawa, C.K.2    Lannan, C.N.3    Fryer, J.L.4
  • 53
    • 0002972153 scopus 로고
    • Infectious hematopoietic necrosis
    • Cornell University Press, Ithaca, New York
    • Wolf, K. 1988. Infectious hematopoietic necrosis. Pages 83-114 in Fish Viruses and Fish Viral Diseases. Cornell University Press, Ithaca, New York.
    • (1988) Fish Viruses and Fish Viral Diseases , pp. 83-114
    • Wolf, K.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.