메뉴 건너뛰기




Volumn 71, Issue 4, 1997, Pages 2647-2655

Evolution and probable transmission of intersubtype recombinant human immunodeficiency virus type 1 in a Zambian couple

Author keywords

[No Author keywords available]

Indexed keywords

GAG PROTEIN; VIRUS DNA;

EID: 0030891834     PISSN: 0022538X     EISSN: None     Source Type: Journal    
DOI: 10.1128/jvi.71.4.2647-2655.1997     Document Type: Article
Times cited : (94)

References (50)
  • 2
    • 0024843717 scopus 로고
    • Frequent isolation of HIV-1 from the blood of patients receiving zidovudine (AZT) therapy
    • Burke, D. S., R. R. Redfield, D. C. Bjornson, A. K. Fowler, and C. N. Oster. 1989. Frequent isolation of HIV-1 from the blood of patients receiving zidovudine (AZT) therapy. N. Engl. J. Med. 321:1682.
    • (1989) N. Engl. J. Med. , vol.321 , pp. 1682
    • Burke, D.S.1    Redfield, R.R.2    Bjornson, D.C.3    Fowler, A.K.4    Oster, C.N.5
  • 6
    • 0018304892 scopus 로고
    • Structure, replication, and recombination of retrovirus genomes: Some unifying hypotheses
    • Coffin, J. M. 1979. Structure, replication, and recombination of retrovirus genomes: some unifying hypotheses. J. Gen. Virol. 42:1-26.
    • (1979) J. Gen. Virol. , vol.42 , pp. 1-26
    • Coffin, J.M.1
  • 7
    • 0029069857 scopus 로고
    • Dual human immunodeficiency virus type 1 infection and recombination in a dually exposed transfusion recipient
    • Diaz, R. S., E. C. Sabino, A. Mayer, J. W. Mosley, M. P. Busch, and Transfusion Safety Study Group. 1995. Dual human immunodeficiency virus type 1 infection and recombination in a dually exposed transfusion recipient. J. Virol. 69:3273-3281.
    • (1995) J. Virol. , vol.69 , pp. 3273-3281
    • Diaz, R.S.1    Sabino, E.C.2    Mayer, A.3    Mosley, J.W.4    Busch, M.P.5    Group, T.S.S.6
  • 8
    • 0019797407 scopus 로고
    • Evolutionary trees from DNA sequences: A maximum likelihood approach
    • Felsenstein, J. 1981. Evolutionary trees from DNA sequences: a maximum likelihood approach. J. Mol. Evol. 17:368-376.
    • (1981) J. Mol. Evol. , vol.17 , pp. 368-376
    • Felsenstein, J.1
  • 9
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein, J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 10
    • 0024152983 scopus 로고
    • Phytogenies from molecular sequences: Inference and reliability
    • Felsenstein, J. 1988. Phytogenies from molecular sequences: inference and reliability. Annu. Rev. Genet. 22:521-565.
    • (1988) Annu. Rev. Genet. , vol.22 , pp. 521-565
    • Felsenstein, J.1
  • 12
    • 0242610662 scopus 로고    scopus 로고
    • Longstanding presence in Belgians of multiple non-B HIV-1 subtypes
    • Fransen, K., A. Buvé, J. N. Nkengasong, M. Laga, and G. van der Groen. 1996. Longstanding presence in Belgians of multiple non-B HIV-1 subtypes. Lancet 347:1403.
    • (1996) Lancet , vol.347 , pp. 1403
    • Fransen, K.1    Buvé, A.2    Nkengasong, J.N.3    Laga, M.4    Van Der Groen, G.5
  • 15
    • 0028363094 scopus 로고
    • Coexpression of exogenous and endogenous mouse mammary tumor virus RNA in vivo results in viral recombination and broadens the virus host range
    • Golovkina, T. V., A. B. Jaffe, and S. R. Ross. 1994. Coexpression of exogenous and endogenous mouse mammary tumor virus RNA in vivo results in viral recombination and broadens the virus host range. J. Virol. 68:5019-5026.
    • (1994) J. Virol. , vol.68 , pp. 5019-5026
    • Golovkina, T.V.1    Jaffe, A.B.2    Ross, S.R.3
  • 16
    • 0025216861 scopus 로고
    • Retroviral recombination during reverse transcription
    • Goodrich, D. W., and P. H. Duesberg. 1990. Retroviral recombination during reverse transcription. Proc. Natl. Acad. Sci. USA 87:2052-2056.
    • (1990) Proc. Natl. Acad. Sci. USA , vol.87 , pp. 2052-2056
    • Goodrich, D.W.1    Duesberg, P.H.2
  • 19
    • 0025635705 scopus 로고
    • Retroviral recombination and reverse transcription
    • Hu, W.-S., and H. M. Temin. 1990. Retroviral recombination and reverse transcription. Science 250:1227-1233.
    • (1990) Science , vol.250 , pp. 1227-1233
    • Hu, W.-S.1    Temin, H.M.2
  • 21
    • 0025666927 scopus 로고
    • Generation of diversity in retroviruses
    • Katz, R. A., and A. M. Skalka. 1990. Generation of diversity in retroviruses. Annu. Rev. Genet. 24:409-445.
    • (1990) Annu. Rev. Genet. , vol.24 , pp. 409-445
    • Katz, R.A.1    Skalka, A.M.2
  • 22
    • 0028874043 scopus 로고
    • Retroviral recombination can lead to linkage of reverse transcriptase mutations that confer increased zidovudine resistance
    • Kellam, P., and B. A. Larder. 1995. Retroviral recombination can lead to linkage of reverse transcriptase mutations that confer increased zidovudine resistance. J. Virol. 69:669-674.
    • (1995) J. Virol. , vol.69 , pp. 669-674
    • Kellam, P.1    Larder, B.A.2
  • 23
    • 0029102137 scopus 로고
    • Genetic analysis of human immunodeficiency virus type 1 strains from patients in Cyprus: Identification of a new subtype designated subtype I
    • Kostrikis, L. G., E. Bagdades, Y. Z. Cao, L. Q. Zhang, D. Dimitriou, and D. D. Ho. 1995. Genetic analysis of human immunodeficiency virus type 1 strains from patients in Cyprus: identification of a new subtype designated subtype I. J. Virol. 69:6122-6130.
    • (1995) J. Virol. , vol.69 , pp. 6122-6130
    • Kostrikis, L.G.1    Bagdades, E.2    Cao, Y.Z.3    Zhang, L.Q.4    Dimitriou, D.5    Ho, D.D.6
  • 24
    • 0029063822 scopus 로고
    • Biological and molecular characterization of subtype D, G, and A/D recombinant HIV-1 transmissions in Sweden
    • Leitner, T., D. Escanilla, S. Marquina, J. Wahlberg, C. Brostrom, H. B. Hansson, M. Uhlen, and J. Albert. 1995. Biological and molecular characterization of subtype D, G, and A/D recombinant HIV-1 transmissions in Sweden. Virology 209:136-146.
    • (1995) Virology , vol.209 , pp. 136-146
    • Leitner, T.1    Escanilla, D.2    Marquina, S.3    Wahlberg, J.4    Brostrom, C.5    Hansson, H.B.6    Uhlen, M.7    Albert, J.8
  • 30
    • 0029075130 scopus 로고
    • Lower in vivo mutation rate of human immunodeficiency virus type 1 than that predicted from the fidelity of purified reverse transcriptase
    • Mansky, L. M., and H. M. Temin. 1995. Lower in vivo mutation rate of human immunodeficiency virus type 1 than that predicted from the fidelity of purified reverse transcriptase. J. Virol. 69:5087-5094.
    • (1995) J. Virol. , vol.69 , pp. 5087-5094
    • Mansky, L.M.1    Temin, H.M.2
  • 31
    • 0026708873 scopus 로고
    • Analyzing the mosaic structure of genes
    • Maynard Smith, J. 1992. Analyzing the mosaic structure of genes. J. Mol. Evol. 34:126-129.
    • (1992) J. Mol. Evol. , vol.34 , pp. 126-129
    • Maynard Smith, J.1
  • 32
    • 0028059525 scopus 로고
    • Different types of structural variation in STRs: HumFES/FPS, HumVWA and HumD21S11
    • Moller, A., E. Meyer, and B. Brinkmann. 1994. Different types of structural variation in STRs: HumFES/FPS, HumVWA and HumD21S11. Int. J. Legal Med. 106:319-323.
    • (1994) Int. J. Legal Med. , vol.106 , pp. 319-323
    • Moller, A.1    Meyer, E.2    Brinkmann, B.3
  • 33
    • 0003518435 scopus 로고
    • Human retroviruses and AIDS
    • Las Alamos National Laboratory, Los Alamos, N.Mex.
    • Myers, G., et al. 1995. Human retroviruses and AIDS. Theoretical Biology and Biophysics, Las Alamos National Laboratory, Los Alamos, N.Mex.
    • (1995) Theoretical Biology and Biophysics
    • Myers, G.1
  • 34
    • 0027957393 scopus 로고
    • FastD-NAML: A tool for construction of phylogenetic trees of DNA sequences using maximum likelihood
    • Olsen, G. J., H. Matsuda, R. Hagstrom, and R. Overbeek. 1994. fastD-NAML: a tool for construction of phylogenetic trees of DNA sequences using maximum likelihood. Comput. Appl. Biosci. 10:41-48.
    • (1994) Comput. Appl. Biosci. , vol.10 , pp. 41-48
    • Olsen, G.J.1    Matsuda, H.2    Hagstrom, R.3    Overbeek, R.4
  • 35
    • 0024267430 scopus 로고
    • Fidelity of HIV-1 reverse transcriptase
    • Preston, B. D., B. J. Poiesz, and L. A. Loeb. 1988. Fidelity of HIV-1 reverse transcriptase. Science 242:1168-1171.
    • (1988) Science , vol.242 , pp. 1168-1171
    • Preston, B.D.1    Poiesz, B.J.2    Loeb, L.A.3
  • 36
    • 0027427422 scopus 로고
    • Identification of repeat sequence heterogeneity at the polymorphic short tandem repeat locus HUMTH001[AATG]n and reassignment of alleles in population analysis by using a locus-specific allelic ladder
    • Puers, C., H. A. Hammond, L. Jin, C. T. Caskey, and J. W. Schumm. 1993. Identification of repeat sequence heterogeneity at the polymorphic short tandem repeat locus HUMTH001[AATG]n and reassignment of alleles in population analysis by using a locus-specific allelic ladder. Am. J. Hum. Genet. 53:953-958.
    • (1993) Am. J. Hum. Genet. , vol.53 , pp. 953-958
    • Puers, C.1    Hammond, H.A.2    Jin, L.3    Caskey, C.T.4    Schumm, J.W.5
  • 39
    • 0028100982 scopus 로고
    • Identification of human immunodeficiency virus type 1 envelope genes recombinant between subtypes B and F in two epidemiologically linked individuals from Brazil
    • Sabino, E. C., E. G. Shpaer, M. G. Morgado, B. T. M. Korber, R. S. Diaz, V. Bongertz, S. Cavalcante, B. Galvao-Castro, J. I. Mullins, and A. Mayer. 1994. Identification of human immunodeficiency virus type 1 envelope genes recombinant between subtypes B and F in two epidemiologically linked individuals from Brazil. J. Virol. 68:6340-6346.
    • (1994) J. Virol. , vol.68 , pp. 6340-6346
    • Sabino, E.C.1    Shpaer, E.G.2    Morgado, M.G.3    Korber, B.T.M.4    Diaz, R.S.5    Bongertz, V.6    Cavalcante, S.7    Galvao-Castro, B.8    Mullins, J.I.9    Mayer, A.10
  • 40
    • 0027328284 scopus 로고
    • Molecular epidemiology of HIV-1 based on phylogenetic analysis of in vivo gag p7/p9 direct sequences
    • Salminen, M., A. Nykanen, H. Brummer-Korvenkontio, M. L. Kantanen, K. Liitsola, and P. Leinikki. 1993. Molecular epidemiology of HIV-1 based on phylogenetic analysis of in vivo gag p7/p9 direct sequences. Virology 195: 185-194.
    • (1993) Virology , vol.195 , pp. 185-194
    • Salminen, M.1    Nykanen, A.2    Brummer-Korvenkontio, H.3    Kantanen, M.L.4    Liitsola, K.5    Leinikki, P.6
  • 41
    • 0028793170 scopus 로고
    • Identification of breakpoints in intergenotypic recombinants of HIV-1 by bootscanning
    • Salminen, M. O., J. K. Carr, D. S. Burke, and F. E. McCutchan. 1995. Identification of breakpoints in intergenotypic recombinants of HIV-1 by bootscanning. AIDS Res. Hum. Retroviruses 11:1423-1425.
    • (1995) AIDS Res. Hum. Retroviruses , vol.11 , pp. 1423-1425
    • Salminen, M.O.1    Carr, J.K.2    Burke, D.S.3    McCutchan, F.E.4
  • 43
    • 0028885704 scopus 로고
    • Recovery of virtually full-length HIV-1 provirus of diverse subtypes from primary virus cultures using the polymerase chain reaction
    • Salminen, M. O., C. Koch, E. Sanders-Buell, P. K. Ehrenberg, N. L. Michael, J. K. Carr, D. S. Burke, and F. E. McCutchan. 1995. Recovery of virtually full-length HIV-1 provirus of diverse subtypes from primary virus cultures using the polymerase chain reaction. Virology 213:80-86.
    • (1995) Virology , vol.213 , pp. 80-86
    • Salminen, M.O.1    Koch, C.2    Sanders-Buell, E.3    Ehrenberg, P.K.4    Michael, N.L.5    Carr, J.K.6    Burke, D.S.7    McCutchan, F.E.8
  • 44
    • 0026608762 scopus 로고
    • Homologous recombination of copackaged retrovirus RNAs during reverse transcription
    • Stuhlmann, H., and P. Berg. 1992. Homologous recombination of copackaged retrovirus RNAs during reverse transcription. J. Virol. 66:2378-2388.
    • (1992) J. Virol. , vol.66 , pp. 2378-2388
    • Stuhlmann, H.1    Berg, P.2
  • 45
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson, J. D., D. G. Higgins, and T. J Gibson. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:4673-4680.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 46
    • 0027221170 scopus 로고
    • Loss of antigenic epitopes as the result of env gene recombination in retrovirus-induced leukemia in immunocompetent mice
    • Tumas, K. M., J. M. Poszgay, N. Avidan, S. J. Ksiazek, B. Overmoyer, K. J. Blank, and M. B. Prystowsky. 1993. Loss of antigenic epitopes as the result of env gene recombination in retrovirus-induced leukemia in immunocompetent mice. Virology 192:587-595.
    • (1993) Virology , vol.192 , pp. 587-595
    • Tumas, K.M.1    Poszgay, J.M.2    Avidan, N.3    Ksiazek, S.J.4    Overmoyer, B.5    Blank, K.J.6    Prystowsky, M.B.7
  • 48
    • 0029877835 scopus 로고    scopus 로고
    • HIV type 1 subtypes B and C from new regions of India and Indian and Ethiopian expatriates in Kuwait
    • Voevodin, A., K. A. Crandall, P. Seth, and S. Al Mufti. 1996. HIV type 1 subtypes B and C from new regions of India and Indian and Ethiopian expatriates in Kuwait. AIDS Res. Hum. Retroviruses 12:641-643.
    • (1996) AIDS Res. Hum. Retroviruses , vol.12 , pp. 641-643
    • Voevodin, A.1    Crandall, K.A.2    Seth, P.3    Al Mufti, S.4
  • 49
    • 0030060446 scopus 로고    scopus 로고
    • Long polymerase chain reaction amplification of heterogeneous HIV type 1 templates produces recombination at a relatively high frequency
    • Yang, Y. L., G. Q. Wang, K. Dorman, and A. H. Kaplan. 1996. Long polymerase chain reaction amplification of heterogeneous HIV type 1 templates produces recombination at a relatively high frequency. AIDS Res. Hum. Retroviruses 12:303-306.
    • (1996) AIDS Res. Hum. Retroviruses , vol.12 , pp. 303-306
    • Yang, Y.L.1    Wang, G.Q.2    Dorman, K.3    Kaplan, A.H.4
  • 50
    • 0028815682 scopus 로고
    • Evidence for coinfection by multiple strains of human immunodeficiency virus type 1 subtype B in an acute seroconvertor
    • Zhu, T., N. Wang, A. Carr, S. Wolinsky, and D. D. Ho. 1995. Evidence for coinfection by multiple strains of human immunodeficiency virus type 1 subtype B in an acute seroconvertor. J. Virol. 69:1324-1327.
    • (1995) J. Virol. , vol.69 , pp. 1324-1327
    • Zhu, T.1    Wang, N.2    Carr, A.3    Wolinsky, S.4    Ho, D.D.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.