Combinatorial signaling microenvironments for studying stem cell fate

Stem Cells and Development

Volumn 17, Issue 1, 2008, Pages 29-39

  Flaim, Christopher J ^a   Teng, Dayu ^a   Chien, Shu ^a   Bhatia, Sangeeta N ^b,c  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b MASSACHUSETTS INSTITUTE OF TECHNOLOGY   (United States)

^c BRIGHAM AND WOMEN S HOSPITAL   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ACTIVIN A; BONE MORPHOGENETIC PROTEIN 4; CELL NUCLEUS DNA; COLLAGEN TYPE 1; COLLAGEN TYPE 3; COLLAGEN TYPE 4; FIBROBLAST GROWTH FACTOR 4; FIBRONECTIN; GREEN FLUORESCENT PROTEIN; LAMININ; MYOSIN HEAVY CHAIN ALPHA; WNT3A PROTEIN;

ARTICLE; CELL ADHESION; CELL DIFFERENTIATION; CELL FATE; CELL LINEAGE; CONTROLLED STUDY; DNA CONTENT; EMBRYONIC STEM CELL; EXTRACELLULAR MATRIX; FLUORESCENCE MICROSCOPY; HUMAN; HUMAN CELL; MICROARRAY ANALYSIS; MICROENVIRONMENT; PRIORITY JOURNAL; PROTEIN EXPRESSION; STEM CELL;

CELL DIFFERENTIATION; CELL LINEAGE; CELL PROLIFERATION; EMBRYONIC STEM CELLS; EXTRACELLULAR MATRIX PROTEINS; HUMANS; INTERCELLULAR SIGNALING PEPTIDES AND PROTEINS; MYOCARDIUM; PROTEIN BINDING; SIGNAL TRANSDUCTION; TISSUE ARRAY ANALYSIS;

EID: 39449127641     PISSN: 15473287     EISSN: None     Source Type: Journal    
DOI: 10.1089/scd.2007.0085     Document Type: Article

References (25)

1. Fashena SJ and SM Thomas. (2000). Signalling by adhesion receptors. Nature Cell Biol 2:E225-229.
2. Watt FM. (2002). Role of integrins in regulating epidermal adhesion, growth and differentiation. EMBO J 21:3919-3926.
3. Schwartz MA and MH Ginsberg. (2002). Networks and crosstalk: integrin signalling spreads. Nature Cell Biol 4:E65-E68.
4. Yamada KM and S Even-Ram. (2002). Integrin regulation of growth factor receptors. Nature Cell Biol 4:E75-E76.
5. Comoglio PM, C Boccaccio and L Trusolino. (2003). Interactions between growth factor receptors and adhesion molecules: breaking the rules. Curr Opin Cell Biol 15:565-571.
6. Sastry SK and AF Horwitz. (1996). Adhesion-growth factor interactions during differentiation: an integrated biological response. Dev Biol 180:455-467.
7. Natarajan M, K-M Lin, RC Hsueh, PC Sternweis and R Ranganathan. (2006). A global analysis of cross-talk in a mammalian cellular signalling network. Nature Cell Biol 8:571-580.
8. Prudhomme W, GQ Daley, P Zandstra and DA Lauffenburger. (2004). Multivariate proteomic analysis of murine embryonic stem cell self-renewal versus differentiation signaling. Proc Natl Acad Sci USA 101:2900-2905.
9. Prudhomme WA, KH Duggar and DA Lauffenburger. (2004). Cell population dynamics model for deconvolution of murine embryonic stem cell self-renewal and differentiation responses to cytokines and extracellular matrix. Biotechnol Bioeng 88:264-272.
10. Woolf PJ, W Prudhomme, L Daheron, GQ Daley and DA Lauffenburger. (2005). Bayesian analysis of signaling networks governing embryonic stem cell fate decisions. Bioinformatics 21:741-753.
11. Anderson DG, S Levenberg and R Langer. (2004). Nanoliter-scale synthesis of arrayed biomaterials and application to human embryonic stem cells. Nature Biotechnol 22:863-866.
12. Flaim CJ, S Chien and SN Bhatia. (2005). An extracellular matrix microarray for probing cellular differentiation. Nature Methods 2:119-125.
13. Kuschel C, H Steuer, AN Maurer, B Kanzok, R Stoop and B Angres. (2006). Cell adhesion profiling using extracellular matrix protein microarrays. Biotechniques 40:523-531.
14. Soen Y, A Mori, TD Palmer and PO Brown. (2006). Exploring the regulation of human neural precursor cell differentiation using arrays of signaling microenvironments. Mol Syst Biol 2:E1-E14.
15. Nakajima M, T Ishimuro, K Kato, IK Ko, I Hirata, Y Arima and H Iwata. (2007). Combinatorial protein display for the cell-based screening of biomaterials that direct neural stem cell differentiation. Biomaterials 28:1048-1060.
16. Brock P, IHL Mamelars and TM Jovin. (1999). Comparison of fixation protocols for adherent cultured cells applied to a GFP fusion protein of the epidermal growth factor receptor. Cytometry 35:353-362.
17. Chalfie M and SR Kain, eds. Green Fluorescent Protein: Properties, Applications, and Protocols. (2006). Wiley-Interscience, Hoboken, NJ.
18. Box G, W Hunter and J Hunter. Statistics for Experimenters. (1978). Wiley, New York.
19. Foley A and M Mercola. (2004). Heart induction: Embryology to cardiomyocyte regeneration. Trends Cardiovasc Med 14:121-125.
20. Foley AC and M Mercola. (2005). Heart induction by Wnt antagonists depends on the homeodomain transcription factor Hex. Genes Dev 19:387-396.
21. Li X, Y Chen, S Scheele, E Arman, R Haffner-Krausz, P Ekblom and P Lonai. (2001). Fibroblast growth factor signaling and basement membrane assembly are connected during epithelial morphogenesis of the embryoid body. J Cell Biol 153:811-822.
22. Coucouvanis E and GR Martin. (1999). BMP signaling plays a role in visceral endoderm differentiation and cavitation in the early mouse embryo. Development 126:535-546.
23. Esner M, J Pachernik, A Hampl and P Dvorak. (2002). Targeted disruption of fibroblast growth factor receptor-1 blocks maturation of visceral endoderm and cavitation in mouse embryoid bodies. Int J Dev Biol 46:817-825.
24. Kato T, K Tsuda and K Asai. (2005). Selective integration of multiple biological data for supervised network inference. Bioinformatics:bti339.
25. Tegner J, MKS Yeung, J Hasty and JJ Collins. (2003). Reverse engineering gene networks: Integrating genetic perturbations with dynamical modeling. Proc Natl Acad Sci USA 100:5944-5949.