메뉴 건너뛰기




Volumn 46, Issue 2, 2008, Pages 415-429

The mushroom family Psathyrellaceae: Evidence for large-scale polyphyly of the genus Psathyrella

Author keywords

Bayesian; Deliquescence; Fungi; GARLI; INAASE; Maximum likelihood; Maximum parsimony; Morphology; Systematics; Taxonomy

Indexed keywords

AGARICALES; ARTICLE; CLASSIFICATION; CYTOLOGY; DNA SEQUENCE; GENETICS; PHYLOGENY;

EID: 39149102834     PISSN: 10557903     EISSN: 10959513     Source Type: Journal    
DOI: 10.1016/j.ympev.2007.11.004     Document Type: Article
Times cited : (67)

References (60)
  • 1
    • 2542433284 scopus 로고    scopus 로고
    • Morphology, life cycle biology, and DNA sequence analysis of rust fungi on garlic and chives from California
    • Anikster Y., Szabo L.J., Eilam T., Manisterski J., Koike S.T., and Bushnell W.R. Morphology, life cycle biology, and DNA sequence analysis of rust fungi on garlic and chives from California. Phytopathology 94 (2004) 569-577
    • (2004) Phytopathology , vol.94 , pp. 569-577
    • Anikster, Y.1    Szabo, L.J.2    Eilam, T.3    Manisterski, J.4    Koike, S.T.5    Bushnell, W.R.6
  • 2
    • 85046802387 scopus 로고
    • Two new species of Psathyrella and Gymnopilus from Guangdong province
    • Bi Z. Two new species of Psathyrella and Gymnopilus from Guangdong province. Guihaia 11 (1991) 131-134
    • (1991) Guihaia , vol.11 , pp. 131-134
    • Bi, Z.1
  • 3
    • 0004609129 scopus 로고
    • New or interesting Queensland Agaricales
    • Dennis R.W.G. New or interesting Queensland Agaricales. Kew Bull. (1955) 107-110
    • (1955) Kew Bull. , pp. 107-110
    • Dennis, R.W.G.1
  • 4
    • 33846222899 scopus 로고    scopus 로고
    • Reconstructing the Clavariaceae using nuclear large subunit rDNA sequences and a new genus segregated from Clavaria
    • Dentinger B.T.M., and McLaughlin D.J. Reconstructing the Clavariaceae using nuclear large subunit rDNA sequences and a new genus segregated from Clavaria. Mycologia 98 (2006) 746-762
    • (2006) Mycologia , vol.98 , pp. 746-762
    • Dentinger, B.T.M.1    McLaughlin, D.J.2
  • 5
    • 0001767194 scopus 로고
    • Cases in which parsimony or compatibility methods will be positively misleading
    • Felsenstein J. Cases in which parsimony or compatibility methods will be positively misleading. Syst. Biol. 22 (1978) 240-249
    • (1978) Syst. Biol. , vol.22 , pp. 240-249
    • Felsenstein, J.1
  • 6
    • 0001641598 scopus 로고
    • Confidence limits on phylogenies with a molecular clock
    • Felsenstein J. Confidence limits on phylogenies with a molecular clock. Syst. Zool. 34 (1985) 783-791
    • (1985) Syst. Zool. , vol.34 , pp. 783-791
    • Felsenstein, J.1
  • 7
    • 0027580147 scopus 로고
    • ITS primers with enhanced specificity for basidiomycetes-application to the identification of mycorrhizae and rusts
    • Gardes M., and Bruns T.D. ITS primers with enhanced specificity for basidiomycetes-application to the identification of mycorrhizae and rusts. Mol. Ecol. 2 (1993) 113-118
    • (1993) Mol. Ecol. , vol.2 , pp. 113-118
    • Gardes, M.1    Bruns, T.D.2
  • 8
    • 14444278380 scopus 로고
    • A new species of Psathyrella (Agaricales, Coprinaceae) from Mexico with discussions on the known species
    • Guzmán G., Montoya-Bello L., and Bandala-Muñoz V.M. A new species of Psathyrella (Agaricales, Coprinaceae) from Mexico with discussions on the known species. Brittonia 40 (1988) 229-334
    • (1988) Brittonia , vol.40 , pp. 229-334
    • Guzmán, G.1    Montoya-Bello, L.2    Bandala-Muñoz, V.M.3
  • 9
    • 0003551059 scopus 로고
    • Hawksworth D.L., Kirk P.M., Sutton B.C., and Pegler D.N. (Eds), CABI, Oxon, UK
    • In: Hawksworth D.L., Kirk P.M., Sutton B.C., and Pegler D.N. (Eds). Ainsworth and Bisby's Dictionary of Fungi (1995), CABI, Oxon, UK
    • (1995) Ainsworth and Bisby's Dictionary of Fungi
  • 10
    • 34247647914 scopus 로고    scopus 로고
    • A phylogenetic overview of the Agaricomycotina
    • Hibbett D.S. A phylogenetic overview of the Agaricomycotina. Mycologia 98 (2006) 917-925
    • (2006) Mycologia , vol.98 , pp. 917-925
    • Hibbett, D.S.1
  • 11
    • 39149111318 scopus 로고    scopus 로고
    • Holmgren, P.K., Holmgren, N.H., 1998. Index Herbariorum: a global directory of public herbaria and associated staff. New York Botanical Garden's Virtual Herbarium (continuously updated). Available from: .
    • Holmgren, P.K., Holmgren, N.H., 1998. Index Herbariorum: a global directory of public herbaria and associated staff. New York Botanical Garden's Virtual Herbarium (continuously updated). Available from: .
  • 12
    • 39149091089 scopus 로고    scopus 로고
    • Hopple, J.S., 1994. Phylogenetic investigations in the genus Coprinus based on morphological and molecular characters. Ph.D. Thesis, Duke University, Durham.
    • Hopple, J.S., 1994. Phylogenetic investigations in the genus Coprinus based on morphological and molecular characters. Ph.D. Thesis, Duke University, Durham.
  • 13
    • 0033210889 scopus 로고    scopus 로고
    • Phylogenetic relationships in the mushroom genus Coprinus and dark-spored allies based on sequence data from the nuclear gene coding for the large ribosomal subunit RNA: divergent domains, outgroups, and monophyly
    • Hopple J.S., and Vilgalys R. Phylogenetic relationships in the mushroom genus Coprinus and dark-spored allies based on sequence data from the nuclear gene coding for the large ribosomal subunit RNA: divergent domains, outgroups, and monophyly. Mol. Phylogenet. Evol. 13 (1999) 1-19
    • (1999) Mol. Phylogenet. Evol. , vol.13 , pp. 1-19
    • Hopple, J.S.1    Vilgalys, R.2
  • 14
  • 15
    • 0002407532 scopus 로고
    • Rysslands, Finlands och den Skandinaviska halföns Hattsvampar 1. Skifsvampar
    • Karsten P.A. Rysslands, Finlands och den Skandinaviska halföns Hattsvampar 1. Skifsvampar. Bidrag Kännedom Finlands Natur Folk 32 (1879) 1-571
    • (1879) Bidrag Kännedom Finlands Natur Folk , vol.32 , pp. 1-571
    • Karsten, P.A.1
  • 16
    • 2342430305 scopus 로고    scopus 로고
    • Agaricales of the Hawaiian islands 8. Agaricaceae: Coprinus and Podaxis; Psathyrellaceae: Coprinopsis, Coprinellus and Parasola
    • Keirle M.R., Hemmes D.E., and Desjardin D.E. Agaricales of the Hawaiian islands 8. Agaricaceae: Coprinus and Podaxis; Psathyrellaceae: Coprinopsis, Coprinellus and Parasola. Fungal Div. 15 (2004) 33-124
    • (2004) Fungal Div. , vol.15 , pp. 33-124
    • Keirle, M.R.1    Hemmes, D.E.2    Desjardin, D.E.3
  • 17
    • 0003804933 scopus 로고    scopus 로고
    • Kirk P.M., Cannon P.F., David J.C., and Stalpers J.A. (Eds), CABI, Oxon, UK
    • In: Kirk P.M., Cannon P.F., David J.C., and Stalpers J.A. (Eds). Dictionary of the Fungi (2001), CABI, Oxon, UK
    • (2001) Dictionary of the Fungi
  • 18
    • 0003158856 scopus 로고
    • The Dutch, French, and British species of Psathyrella
    • Kits van Waveren E. The Dutch, French, and British species of Psathyrella. Persoonia 2 Suppl. (1985) 1-300
    • (1985) Persoonia , vol.2 , Issue.SUPPL , pp. 1-300
    • Kits van Waveren, E.1
  • 19
    • 0030444698 scopus 로고    scopus 로고
    • Internal transcribed spacer sequences from 38 recognized species of Suillus sensu lato: phylogenetic and taxonomic implications
    • Kretzer A., Li Y., Szaro T., and Bruns T.D. Internal transcribed spacer sequences from 38 recognized species of Suillus sensu lato: phylogenetic and taxonomic implications. Mycologia 88 (1996) 776-785
    • (1996) Mycologia , vol.88 , pp. 776-785
    • Kretzer, A.1    Li, Y.2    Szaro, T.3    Bruns, T.D.4
  • 21
    • 0000543596 scopus 로고    scopus 로고
    • The comparison of morphological and molecular data in phylogenetic systematics
    • DeSalle R., and Schierwater B. (Eds), Birkhäuser, Basel
    • Larson A. The comparison of morphological and molecular data in phylogenetic systematics. In: DeSalle R., and Schierwater B. (Eds). Molecular Approaches to Ecology and Evolution (1998), Birkhäuser, Basel 275-296
    • (1998) Molecular Approaches to Ecology and Evolution , pp. 275-296
    • Larson, A.1
  • 22
    • 0034351388 scopus 로고    scopus 로고
    • Integrating ambiguously aligned regions of DNA sequences in phylogenetic analyses without violating positional homology
    • Lutzoni F., Wagner P., Reeb V., and Zoller S. Integrating ambiguously aligned regions of DNA sequences in phylogenetic analyses without violating positional homology. Syst. Biol. 49 (2000) 628-651
    • (2000) Syst. Biol. , vol.49 , pp. 628-651
    • Lutzoni, F.1    Wagner, P.2    Reeb, V.3    Zoller, S.4
  • 23
    • 39149103452 scopus 로고    scopus 로고
    • Maddison, D.R., Maddison, W.P., 2001. MacClade 4: Analysis of Phylogeny and Character Evolution. Version 4.03. Sinauer Associates, Sunderland, MA.
    • Maddison, D.R., Maddison, W.P., 2001. MacClade 4: Analysis of Phylogeny and Character Evolution. Version 4.03. Sinauer Associates, Sunderland, MA.
  • 24
    • 0036241312 scopus 로고    scopus 로고
    • Using RPB1 sequences to improve phylogenetic inference among mushrooms (Inocybe, Agaricales)
    • Matheny P.B., Liu Y.J., Ammirati J.F., and Hall B.D. Using RPB1 sequences to improve phylogenetic inference among mushrooms (Inocybe, Agaricales). Am. J. Bot. 89 (2002) 688-698
    • (2002) Am. J. Bot. , vol.89 , pp. 688-698
    • Matheny, P.B.1    Liu, Y.J.2    Ammirati, J.F.3    Hall, B.D.4
  • 26
    • 0026292291 scopus 로고
    • Parsimony and the choice between different transformations for the same character set
    • Mickevich M.F., and Lipscomb D. Parsimony and the choice between different transformations for the same character set. Cladistics 7 (1991) 111-139
    • (1991) Cladistics , vol.7 , pp. 111-139
    • Mickevich, M.F.1    Lipscomb, D.2
  • 27
    • 0034350421 scopus 로고    scopus 로고
    • Phylogenetic relationships of agaric fungi based on nuclear large subunit ribosomal DNA sequences
    • Moncalvo J.M., Lutzoni F.M., Rehner S.A., Johnson J., and Vilgalys R. Phylogenetic relationships of agaric fungi based on nuclear large subunit ribosomal DNA sequences. Syst. Biol. 49 (2000) 278-305
    • (2000) Syst. Biol. , vol.49 , pp. 278-305
    • Moncalvo, J.M.1    Lutzoni, F.M.2    Rehner, S.A.3    Johnson, J.4    Vilgalys, R.5
  • 30
    • 39149084749 scopus 로고
    • South Indian Agaricales IV. A new species of Psathyrella
    • Natrajan K. South Indian Agaricales IV. A new species of Psathyrella. Mycologia 70 (1978) 1259-1261
    • (1978) Mycologia , vol.70 , pp. 1259-1261
    • Natrajan, K.1
  • 31
    • 39149115417 scopus 로고    scopus 로고
    • The edible Psathyrellas of Haiti
    • (Inoculum, Feb.)
    • Nieves-Rivera A.M. The edible Psathyrellas of Haiti. Mycologia 52 (2001) 1-3 (Inoculum, Feb.)
    • (2001) Mycologia , vol.52 , pp. 1-3
    • Nieves-Rivera, A.M.1
  • 32
    • 39149085405 scopus 로고    scopus 로고
    • Orton, P.D., Watling, R., 1979. British fungal flora. Agarics and Boleti 2 Coprinaceae: Coprinus. R. Bot. Gard., Edinburgh, UK.
    • Orton, P.D., Watling, R., 1979. British fungal flora. Agarics and Boleti 2 Coprinaceae: Coprinus. R. Bot. Gard., Edinburgh, UK.
  • 33
    • 84970557625 scopus 로고
    • Studies on Australasian Agaricales
    • Pegler D.N. Studies on Australasian Agaricales. Aust. J. Bot. 13 (1965) 323-356
    • (1965) Aust. J. Bot. , vol.13 , pp. 323-356
    • Pegler, D.N.1
  • 34
    • 0009583128 scopus 로고
    • Tropical African Agaricales
    • Pegler D.N. Tropical African Agaricales. Persoonia 4 (1966) 73-124
    • (1966) Persoonia , vol.4 , pp. 73-124
    • Pegler, D.N.1
  • 35
    • 11744269524 scopus 로고
    • Tropical species of Psathyrella with ornamented spores
    • Pegler D.N., and Young T.W.K. Tropical species of Psathyrella with ornamented spores. Mycol. Res. 96 (1992) 503-506
    • (1992) Mycol. Res. , vol.96 , pp. 503-506
    • Pegler, D.N.1    Young, T.W.K.2
  • 37
    • 0031773680 scopus 로고    scopus 로고
    • MODELTEST: testing the model of DNA substitution
    • Posada D., and Crandall K.A. MODELTEST: testing the model of DNA substitution. Bioinformatics 14 (1998) 817-818
    • (1998) Bioinformatics , vol.14 , pp. 817-818
    • Posada, D.1    Crandall, K.A.2
  • 39
    • 0035098416 scopus 로고    scopus 로고
    • Coprinus Pers. and the disposition of Coprinus species sensu lato
    • Redhead S.A., Vilgalys R., Moncalvo J.M., Johnson J., and Hopple J.S. Coprinus Pers. and the disposition of Coprinus species sensu lato. Taxon 50 (2001) 203-241
    • (2001) Taxon , vol.50 , pp. 203-241
    • Redhead, S.A.1    Vilgalys, R.2    Moncalvo, J.M.3    Johnson, J.4    Hopple, J.S.5
  • 40
    • 0032766857 scopus 로고    scopus 로고
    • Multiple comparisons of log-likelihoods with applications to phylogenetic inference
    • Shimodaira H., and Hasegawa M. Multiple comparisons of log-likelihoods with applications to phylogenetic inference. Mol. Biol. Evol. 16 (1999) 114-116
    • (1999) Mol. Biol. Evol. , vol.16 , pp. 114-116
    • Shimodaira, H.1    Hasegawa, M.2
  • 41
    • 0002312488 scopus 로고
    • New genera of Fungi III
    • Singer R. New genera of Fungi III. Mycologia 39 (1947) 77-89
    • (1947) Mycologia , vol.39 , pp. 77-89
    • Singer, R.1
  • 42
    • 0002461279 scopus 로고
    • The Agaricales (mushrooms) in modern taxonomy
    • Singer R. The Agaricales (mushrooms) in modern taxonomy. Lilloa 22 (1949) 1-832
    • (1949) Lilloa , vol.22 , pp. 1-832
    • Singer, R.1
  • 45
    • 33947465887 scopus 로고
    • A new species of Psathyrella
    • Singer R., Smith A.H., and Guzmán G. A new species of Psathyrella. Lloydia 21 (1958) 26-28
    • (1958) Lloydia , vol.21 , pp. 26-28
    • Singer, R.1    Smith, A.H.2    Guzmán, G.3
  • 46
    • 0003132012 scopus 로고
    • The North American species of Psathyrella
    • Smith A.H. The North American species of Psathyrella. Mem. NY Bot. Gard. 24 (1972) 1-633
    • (1972) Mem. NY Bot. Gard. , vol.24 , pp. 1-633
    • Smith, A.H.1
  • 47
    • 31444435431 scopus 로고    scopus 로고
    • Novel analgesic triglycerides from cultures of Agaricus macrosporus and other basidiomycetes as selective inhibitors of neurolysin
    • Stadler M., Hellwig V., Mayer-Barttschmid A., Denzer D., Wiese B., and Burkhardt N. Novel analgesic triglycerides from cultures of Agaricus macrosporus and other basidiomycetes as selective inhibitors of neurolysin. J. Antibiot. 58 (2005) 775-786
    • (2005) J. Antibiot. , vol.58 , pp. 775-786
    • Stadler, M.1    Hellwig, V.2    Mayer-Barttschmid, A.3    Denzer, D.4    Wiese, B.5    Burkhardt, N.6
  • 49
    • 39149130402 scopus 로고    scopus 로고
    • *. Phylogenetic Analysis Using Parsimony (* and other methods), Version 4.0 b10. Sinauer Associates, Sunderland, MA.
    • *. Phylogenetic Analysis Using Parsimony (* and other methods), Version 4.0 b10. Sinauer Associates, Sunderland, MA.
  • 50
    • 27244455280 scopus 로고    scopus 로고
    • Two new species and one new variety of Agaricales from central Honshu, Japan
    • Takahashi H. Two new species and one new variety of Agaricales from central Honshu, Japan. Mycoscience 41 (2000) 15-23
    • (2000) Mycoscience , vol.41 , pp. 15-23
    • Takahashi, H.1
  • 51
    • 0021084212 scopus 로고
    • Phylogenetic inference from restriction endonuclease cleavage site maps with particular reference to the evolution of humans and the apes
    • Templeton A.R. Phylogenetic inference from restriction endonuclease cleavage site maps with particular reference to the evolution of humans and the apes. Evolution 37 (1983) 221-244
    • (1983) Evolution , vol.37 , pp. 221-244
    • Templeton, A.R.1
  • 52
    • 0037067674 scopus 로고    scopus 로고
    • Psathyrella velutina mushroom lectin exhibits high affinity toward sialoglycoproteins possessing terminal N-acetylneuraminic acid α2,3-linked to penultimate galactose residues of trisialyl N-glycans
    • Ueda H., Matsumoto H., Takahashi N., and Ogawa H. Psathyrella velutina mushroom lectin exhibits high affinity toward sialoglycoproteins possessing terminal N-acetylneuraminic acid α2,3-linked to penultimate galactose residues of trisialyl N-glycans. J. Biol. Chem. 277 (2002) 24916-24925
    • (2002) J. Biol. Chem. , vol.277 , pp. 24916-24925
    • Ueda, H.1    Matsumoto, H.2    Takahashi, N.3    Ogawa, H.4
  • 53
    • 39149130044 scopus 로고    scopus 로고
    • Coprinus
    • Noordeloos M.E., Kuyper T.W., and Vellinga E.C. (Eds), CRC press, Boca Raton, FL
    • Uljé C.B. Coprinus. In: Noordeloos M.E., Kuyper T.W., and Vellinga E.C. (Eds). Flora Agaricina Neerlandica 6 (2005), CRC press, Boca Raton, FL 22-109
    • (2005) Flora Agaricina Neerlandica 6 , pp. 22-109
    • Uljé, C.B.1
  • 54
    • 39149126405 scopus 로고    scopus 로고
    • Preliminary checklist of the genus Psathyrella in the Czech Republic and Slovakia
    • Vašutová M. Preliminary checklist of the genus Psathyrella in the Czech Republic and Slovakia. Czech. Mycol. 58 (2006) 1-29
    • (2006) Czech. Mycol. , vol.58 , pp. 1-29
    • Vašutová, M.1
  • 55
    • 2542503833 scopus 로고    scopus 로고
    • Genera in the family Agaricaceae: evidence from nrITS and nrLSU sequences
    • Vellinga E.C. Genera in the family Agaricaceae: evidence from nrITS and nrLSU sequences. Mycol. Res. 108 (2004) 354-377
    • (2004) Mycol. Res. , vol.108 , pp. 354-377
    • Vellinga, E.C.1
  • 56
    • 0025374564 scopus 로고
    • Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species
    • Vilgalys R., and Hester M. Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. J. Bacteriol. 172 (1990) 4238-4246
    • (1990) J. Bacteriol. , vol.172 , pp. 4238-4246
    • Vilgalys, R.1    Hester, M.2
  • 57
    • 20744442179 scopus 로고    scopus 로고
    • The systematic relevance of conidiogenesis modes in the gilled Agaricales
    • Walther G., Garnica S., and Weiß M. The systematic relevance of conidiogenesis modes in the gilled Agaricales. Mycol. Res. 109 (2005) 525-544
    • (2005) Mycol. Res. , vol.109 , pp. 525-544
    • Walther, G.1    Garnica, S.2    Weiß, M.3
  • 58
    • 28444435343 scopus 로고
    • Studies in the genera Lacrymaria and Panaeolus
    • Watling R. Studies in the genera Lacrymaria and Panaeolus. Notes R. Bot. Gard. Edinb. 37 (1979) 369-379
    • (1979) Notes R. Bot. Gard. Edinb. , vol.37 , pp. 369-379
    • Watling, R.1
  • 59
    • 39149105692 scopus 로고    scopus 로고
    • Watling, R., Gregory, N.M., 1987. British fungal flora. Agarics and Boleti 5 Strophariaceae and Coprinaceae pp. R. Bot. Gard. Edinburgh, United Kingdom.
    • Watling, R., Gregory, N.M., 1987. British fungal flora. Agarics and Boleti 5 Strophariaceae and Coprinaceae pp. R. Bot. Gard. Edinburgh, United Kingdom.
  • 60
    • 39149135282 scopus 로고    scopus 로고
    • Zwickl, D.J., 2006. Genetic algorithm application for the phylogenetic analyses of large biological sequence datasets under maximum likelihood. Ph.D. Dissertation, University of Texas at Austin.
    • Zwickl, D.J., 2006. Genetic algorithm application for the phylogenetic analyses of large biological sequence datasets under maximum likelihood. Ph.D. Dissertation, University of Texas at Austin.


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.