-
1
-
-
0033033988
-
A notable example of an evolutionary conserved gene: studies on a putative DNA helicase TIP49
-
Kurokawa Y., Kanemaki M., Makino Y., and Tamura T.A. A notable example of an evolutionary conserved gene: studies on a putative DNA helicase TIP49. DNA Sequence 10 (1999) 37-42
-
(1999)
DNA Sequence
, vol.10
, pp. 37-42
-
-
Kurokawa, Y.1
Kanemaki, M.2
Makino, Y.3
Tamura, T.A.4
-
2
-
-
0032561183
-
An eukaryotic RuvB-like protein (RUVBL1) essential for growth
-
Qiu X.B., Lin Y.L., Thome K.C., Pian P., Schlegel B.P., and Weremowicz S. An eukaryotic RuvB-like protein (RUVBL1) essential for growth. J. Biol. Chem. 273 (1998) 27786-27793
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 27786-27793
-
-
Qiu, X.B.1
Lin, Y.L.2
Thome, K.C.3
Pian, P.4
Schlegel, B.P.5
Weremowicz, S.6
-
3
-
-
0033529547
-
TIP49b, a new RuvB-like DNA helicase, is included in a complex together with another RuvB-like DNA helicase, TIP49a
-
Kanemaki M., Kurokawa Y., Matsu-ura T., Makino Y., Masani A., Okazaki K., et al. TIP49b, a new RuvB-like DNA helicase, is included in a complex together with another RuvB-like DNA helicase, TIP49a. J. Biol. Chem. 274 (1999) 22437-22444
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 22437-22444
-
-
Kanemaki, M.1
Kurokawa, Y.2
Matsu-ura, T.3
Makino, Y.4
Masani, A.5
Okazaki, K.6
-
4
-
-
0034669058
-
Pontin52 and reptin52 function as antagonistic regulators of beta-catenin signalling activity
-
Bauer A., Chauvet S., Huber O., Usseglio F., Rothbacher U., Aragnol D., et al. Pontin52 and reptin52 function as antagonistic regulators of beta-catenin signalling activity. EMBO J. 19 (2000) 6121-6130
-
(2000)
EMBO J.
, vol.19
, pp. 6121-6130
-
-
Bauer, A.1
Chauvet, S.2
Huber, O.3
Usseglio, F.4
Rothbacher, U.5
Aragnol, D.6
-
5
-
-
0024076249
-
Structure and regulation of the Escherichia coli ruv operon involved in DNA repair and recombination
-
Shinagawa H., Makino K., Amemura M., Kimura S., Iwasaki H., and Nakata A. Structure and regulation of the Escherichia coli ruv operon involved in DNA repair and recombination. J. Bacteriol. 170 (1988) 4322-4329
-
(1988)
J. Bacteriol.
, vol.170
, pp. 4322-4329
-
-
Shinagawa, H.1
Makino, K.2
Amemura, M.3
Kimura, S.4
Iwasaki, H.5
Nakata, A.6
-
6
-
-
0026746605
-
Biological roles of the Escherichia coli RuvA, RuvB and RuvC proteins revealed
-
West S.C., and Connolly B. Biological roles of the Escherichia coli RuvA, RuvB and RuvC proteins revealed. Mol. Microbiol. 6 (1992) 2755-2759
-
(1992)
Mol. Microbiol.
, vol.6
, pp. 2755-2759
-
-
West, S.C.1
Connolly, B.2
-
7
-
-
0027604707
-
RuvA, RuvB and RuvC proteins: cleaning-up after recombinational repairs in E. coli
-
Kuzminov A. RuvA, RuvB and RuvC proteins: cleaning-up after recombinational repairs in E. coli. BioEssays 15 (1993) 355-358
-
(1993)
BioEssays
, vol.15
, pp. 355-358
-
-
Kuzminov, A.1
-
8
-
-
34249000045
-
Functional and comparative characterization of Saccharomyces cerevisiae RVB1 and RVB2 genes with bacterial Ruv homologues
-
Radovic S., Rapisarda V.A., Tosato V., and Bruschi C.V. Functional and comparative characterization of Saccharomyces cerevisiae RVB1 and RVB2 genes with bacterial Ruv homologues. FEMS Yeast Res. 7 (2007) 527-539
-
(2007)
FEMS Yeast Res.
, vol.7
, pp. 527-539
-
-
Radovic, S.1
Rapisarda, V.A.2
Tosato, V.3
Bruschi, C.V.4
-
9
-
-
0035844141
-
Rvb1p and Rvb2p are essential components of a chromatin remodeling complex that regulates transcription of over 5% of yeast genes
-
Jonsson Z.O., Dhar S.K., Narlikar G.J., Auty R., Wagle N., Pellman D., et al. Rvb1p and Rvb2p are essential components of a chromatin remodeling complex that regulates transcription of over 5% of yeast genes. J. Biol. Chem. 276 (2001) 16279-16288
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 16279-16288
-
-
Jonsson, Z.O.1
Dhar, S.K.2
Narlikar, G.J.3
Auty, R.4
Wagle, N.5
Pellman, D.6
-
10
-
-
0038013975
-
Impairment of the DNA binding activity of the TATA-binding protein renders the transcriptional function of Rvb2p/Tih2p, the yeast RuvB-like protein, essential for cell growth
-
Ohdate H., Lim C.R., Kokubo T., Matsubara K., Kimata Y., and Kohno K. Impairment of the DNA binding activity of the TATA-binding protein renders the transcriptional function of Rvb2p/Tih2p, the yeast RuvB-like protein, essential for cell growth. J. Biol. Chem. 278 (2003) 14647-14656
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 14647-14656
-
-
Ohdate, H.1
Lim, C.R.2
Kokubo, T.3
Matsubara, K.4
Kimata, Y.5
Kohno, K.6
-
11
-
-
0000120241
-
The Saccharomyces cerevisiae RuvB-like protein, Tih2p, is required for cell cycle progression and RNA polymerase II-directed transcription
-
Lim C.R., Kimata Y., Ohdate H., Kokubo T., Kikuchi N., Horigome T., and Kohno K. The Saccharomyces cerevisiae RuvB-like protein, Tih2p, is required for cell cycle progression and RNA polymerase II-directed transcription. J. Biol. Chem. 275 (2000) 22409-22417
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 22409-22417
-
-
Lim, C.R.1
Kimata, Y.2
Ohdate, H.3
Kokubo, T.4
Kikuchi, N.5
Horigome, T.6
Kohno, K.7
-
12
-
-
0037194576
-
TIP49, but not TRRAP, modulates c-Myc and E2F1 dependent apoptosis
-
Dugan K.A., Wood M.A., and Cole M.D. TIP49, but not TRRAP, modulates c-Myc and E2F1 dependent apoptosis. Oncogene 21 (2002) 5835-5843
-
(2002)
Oncogene
, vol.21
, pp. 5835-5843
-
-
Dugan, K.A.1
Wood, M.A.2
Cole, M.D.3
-
13
-
-
0034769951
-
A well-connected and conserved nucleoplasmic helicase is required for production of box C/D and H/ACA snoRNAs and localization of snoRNP proteins
-
King T.H., Decatur W.A., Bertrand E., Maxwell E.S., and Fournier M.J. A well-connected and conserved nucleoplasmic helicase is required for production of box C/D and H/ACA snoRNAs and localization of snoRNP proteins. Mol. Cell. Biol. 21 (2001) 7731-7746
-
(2001)
Mol. Cell. Biol.
, vol.21
, pp. 7731-7746
-
-
King, T.H.1
Decatur, W.A.2
Bertrand, E.3
Maxwell, E.S.4
Fournier, M.J.5
-
14
-
-
9744222917
-
Assembly and maturation of the U3 snoRNP in the nucleoplasm in a large dynamic multiprotein complex
-
Watkins N.J., Lemm I., Ingelfinger D., Schneider C., Hossbach M., Urlaub H., and Luhrmann R. Assembly and maturation of the U3 snoRNP in the nucleoplasm in a large dynamic multiprotein complex. Mol. Cell 16 (2004) 789-798
-
(2004)
Mol. Cell
, vol.16
, pp. 789-798
-
-
Watkins, N.J.1
Lemm, I.2
Ingelfinger, D.3
Schneider, C.4
Hossbach, M.5
Urlaub, H.6
Luhrmann, R.7
-
15
-
-
20044382800
-
Navigating the chaperone network: an integrative map of physical and genetic interactions mediated by the hsp90 chaperone
-
Zhao R., Davey M., Hsu Y.C., Kaplanek P., Tong A., Parsons A.B., et al. Navigating the chaperone network: an integrative map of physical and genetic interactions mediated by the hsp90 chaperone. Cell 120 (2005) 715-727
-
(2005)
Cell
, vol.120
, pp. 715-727
-
-
Zhao, R.1
Davey, M.2
Hsu, Y.C.3
Kaplanek, P.4
Tong, A.5
Parsons, A.B.6
-
16
-
-
33846286030
-
Dodecameric structure and ATPase activity of the human TIP48/TIP49 complex
-
Puri T., Wendler P., Sigala B., Saibil H., and Tsaneva I.R. Dodecameric structure and ATPase activity of the human TIP48/TIP49 complex. J. Mol. Biol. 366 (2007) 179-192
-
(2007)
J. Mol. Biol.
, vol.366
, pp. 179-192
-
-
Puri, T.1
Wendler, P.2
Sigala, B.3
Saibil, H.4
Tsaneva, I.R.5
-
17
-
-
0034601464
-
A chromatin remodelling complex involved in transcription and DNA processing
-
Shen X., Mizuguchi G., Hamiche A., and Wu C. A chromatin remodelling complex involved in transcription and DNA processing. Nature 406 (2000) 541-544
-
(2000)
Nature
, vol.406
, pp. 541-544
-
-
Shen, X.1
Mizuguchi, G.2
Hamiche, A.3
Wu, C.4
-
18
-
-
28144460300
-
A mammalian chromatin remodeling complex with similarities to the yeast INO80 complex
-
Jin J., Cai Y., Yao T., Gottschalk A.J., Florens L., Swanson S.K., et al. A mammalian chromatin remodeling complex with similarities to the yeast INO80 complex. J. Biol. Chem. 280 (2005) 41207-41212
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 41207-41212
-
-
Jin, J.1
Cai, Y.2
Yao, T.3
Gottschalk, A.J.4
Florens, L.5
Swanson, S.K.6
-
19
-
-
9144269660
-
A Snf2 family ATPase complex required for recruitment of the histone H2A variant Htz1
-
Krogan N.J., Keogh M.C., Datta N., Sawa C., Ryan O.W., Ding H., et al. A Snf2 family ATPase complex required for recruitment of the histone H2A variant Htz1. Mol. Cell 12 (2003) 1565-1576
-
(2003)
Mol. Cell
, vol.12
, pp. 1565-1576
-
-
Krogan, N.J.1
Keogh, M.C.2
Datta, N.3
Sawa, C.4
Ryan, O.W.5
Ding, H.6
-
20
-
-
0348184963
-
ATP-driven exchange of histone H2AZ variant catalyzed by SWR1 chromatin remodeling complex
-
Mizuguchi G., Shen X., Landry J., Wu W.H., Sen S., and Wu C. ATP-driven exchange of histone H2AZ variant catalyzed by SWR1 chromatin remodeling complex. Science 303 (2004) 343-348
-
(2004)
Science
, vol.303
, pp. 343-348
-
-
Mizuguchi, G.1
Shen, X.2
Landry, J.3
Wu, W.H.4
Sen, S.5
Wu, C.6
-
21
-
-
19344372948
-
A protein complex containing the conserved Swi2/Snf2-related ATPase SWR1p deposits histone variant H2A.Z into euchromatin
-
Kobor M.S., Venkatasubrahmanyam S., Meneghini M.D., Gin J.W., Jennings J.L., Link A.J., et al. A protein complex containing the conserved Swi2/Snf2-related ATPase SWR1p deposits histone variant H2A.Z into euchromatin. PLoS Biol. 2 (2004) E131
-
(2004)
PLoS Biol.
, vol.2
-
-
Kobor, M.S.1
Venkatasubrahmanyam, S.2
Meneghini, M.D.3
Gin, J.W.4
Jennings, J.L.5
Link, A.J.6
-
22
-
-
0034682736
-
Involvement of the TIP60 histone acetylase complex in DNA repair and apoptosis
-
Ikura T., Ogryzko V.V., Grigoriev M., Groisman R., Wang J., Horikoshi M., et al. Involvement of the TIP60 histone acetylase complex in DNA repair and apoptosis. Cell 102 (2000) 463-473
-
(2000)
Cell
, vol.102
, pp. 463-473
-
-
Ikura, T.1
Ogryzko, V.V.2
Grigoriev, M.3
Groisman, R.4
Wang, J.5
Horikoshi, M.6
-
23
-
-
0033859666
-
An ATPase/helicase complex is an essential cofactor for oncogenic transformation by c-Myc
-
Wood M.A., McMahon S.B., and Cole M.D. An ATPase/helicase complex is an essential cofactor for oncogenic transformation by c-Myc. Mol. Cell 5 (2000) 321-330
-
(2000)
Mol. Cell
, vol.5
, pp. 321-330
-
-
Wood, M.A.1
McMahon, S.B.2
Cole, M.D.3
-
25
-
-
13244255415
-
MUSCLE: a multiple sequence alignment method with reduced time and space complexity
-
Edgar R.C. MUSCLE: a multiple sequence alignment method with reduced time and space complexity. BMC Bioinformatics 5 (2004) 113
-
(2004)
BMC Bioinformatics
, vol.5
, pp. 113
-
-
Edgar, R.C.1
-
26
-
-
3042666256
-
MUSCLE: multiple sequence alignment with high accuracy and high throughput
-
Edgar R.C. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 32 (2004) 1792-1797
-
(2004)
Nucleic Acids Res.
, vol.32
, pp. 1792-1797
-
-
Edgar, R.C.1
-
27
-
-
0032969563
-
+: a class of chaperone-like ATPases associated with the assembly, operation, and disassembly of protein complexes
-
+: a class of chaperone-like ATPases associated with the assembly, operation, and disassembly of protein complexes. Genome Res. 9 (1999) 27-43
-
(1999)
Genome Res.
, vol.9
, pp. 27-43
-
-
Neuwald, A.F.1
Aravind, L.2
Spouge, J.L.3
Koonin, E.V.4
-
28
-
-
0032984767
-
A rat RuvB-like protein, TIP49a, is a germ cell-enriched novel DNA helicase
-
Makino Y., Kanemaki M., Kurokawa Y., Koji T., and Tamura T. A rat RuvB-like protein, TIP49a, is a germ cell-enriched novel DNA helicase. J. Biol. Chem. 274 (1999) 15329-15335
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 15329-15335
-
-
Makino, Y.1
Kanemaki, M.2
Kurokawa, Y.3
Koji, T.4
Tamura, T.5
-
29
-
-
0029360470
-
Improved methods for determination of rotational symmetries in macromolecules
-
Kocsis E., Cerritelli M.E., Trus B.L., Cheng N., and Steven A.C. Improved methods for determination of rotational symmetries in macromolecules. Ultramicroscopy 60 (1995) 219-228
-
(1995)
Ultramicroscopy
, vol.60
, pp. 219-228
-
-
Kocsis, E.1
Cerritelli, M.E.2
Trus, B.L.3
Cheng, N.4
Steven, A.C.5
-
30
-
-
24144465828
-
Characterization of paired helical filaments by scanning transmission electron microscopy
-
Ksiezak-Reding H., and Wall J.S. Characterization of paired helical filaments by scanning transmission electron microscopy. Microsc. Res. Tech. 67 (2005) 126-140
-
(2005)
Microsc. Res. Tech.
, vol.67
, pp. 126-140
-
-
Ksiezak-Reding, H.1
Wall, J.S.2
-
31
-
-
0029779956
-
Allosteric effects of RuvA protein, ATP, and DNA on RuvB protein-mediated ATP hydrolysis
-
Marrione P.E., and Cox M.M. Allosteric effects of RuvA protein, ATP, and DNA on RuvB protein-mediated ATP hydrolysis. Biochemistry 35 (1996) 11228-11238
-
(1996)
Biochemistry
, vol.35
, pp. 11228-11238
-
-
Marrione, P.E.1
Cox, M.M.2
-
32
-
-
0027476446
-
RuvA and RuvB proteins of Escherichia coli exhibit DNA helicase activity in vitro
-
Tsaneva I.R., Muller B., and West S.C. RuvA and RuvB proteins of Escherichia coli exhibit DNA helicase activity in vitro. Proc. Natl Acad. Sci. USA 90 (1993) 1315-1319
-
(1993)
Proc. Natl Acad. Sci. USA
, vol.90
, pp. 1315-1319
-
-
Tsaneva, I.R.1
Muller, B.2
West, S.C.3
-
33
-
-
33746375404
-
Mechanism of DNA translocation in a replicative hexameric helicase
-
Enemark E.J., and Joshua-Tor L. Mechanism of DNA translocation in a replicative hexameric helicase. Nature 442 (2006) 270-275
-
(2006)
Nature
, vol.442
, pp. 270-275
-
-
Enemark, E.J.1
Joshua-Tor, L.2
-
34
-
-
0034625236
-
Crystal structure of T7 gene 4 ring helicase indicates a mechanism for sequential hydrolysis of nucleotides
-
Singleton M.R., Sawaya M.R., Ellenberger T., and Wigley D.B. Crystal structure of T7 gene 4 ring helicase indicates a mechanism for sequential hydrolysis of nucleotides. Cell 101 (2000) 589-600
-
(2000)
Cell
, vol.101
, pp. 589-600
-
-
Singleton, M.R.1
Sawaya, M.R.2
Ellenberger, T.3
Wigley, D.B.4
-
35
-
-
0031465797
-
Asymmetric interactions of hexameric bacteriophage T7 DNA helicase with the 5′- and 3′-tails of the forked DNA substrate
-
Ahnert P., and Patel S.S. Asymmetric interactions of hexameric bacteriophage T7 DNA helicase with the 5′- and 3′-tails of the forked DNA substrate. J. Biol. Chem. 272 (1997) 32267-32273
-
(1997)
J. Biol. Chem.
, vol.272
, pp. 32267-32273
-
-
Ahnert, P.1
Patel, S.S.2
-
36
-
-
0036880196
-
Helicase mechanisms and the coupling of helicases within macromolecular machines: Part I. Structures and properties of isolated helicases
-
Delagoutte E., and von Hippel P.H. Helicase mechanisms and the coupling of helicases within macromolecular machines: Part I. Structures and properties of isolated helicases. Q. Rev. Biophys. 35 (2002) 431-478
-
(2002)
Q. Rev. Biophys.
, vol.35
, pp. 431-478
-
-
Delagoutte, E.1
von Hippel, P.H.2
-
37
-
-
33750477997
-
Structural insights into RNA-dependent ring closure and ATPase activation by the Rho termination factor
-
Skordalakes E., and Berger J.M. Structural insights into RNA-dependent ring closure and ATPase activation by the Rho termination factor. Cell 127 (2006) 553-564
-
(2006)
Cell
, vol.127
, pp. 553-564
-
-
Skordalakes, E.1
Berger, J.M.2
-
38
-
-
0033786801
-
Structure and function of hexameric helicases
-
Patel S.S., and Picha K.M. Structure and function of hexameric helicases. Annu. Rev. Biochem. 69 (2000) 651-697
-
(2000)
Annu. Rev. Biochem.
, vol.69
, pp. 651-697
-
-
Patel, S.S.1
Picha, K.M.2
-
39
-
-
0028170790
-
Hexameric rings of Escherichia coli RuvB protein. Cooperative assembly, processivity and ATPase activity
-
Mitchell A.H., and West S.C. Hexameric rings of Escherichia coli RuvB protein. Cooperative assembly, processivity and ATPase activity. J. Mol. Biol. 243 (1994) 208-215
-
(1994)
J. Mol. Biol.
, vol.243
, pp. 208-215
-
-
Mitchell, A.H.1
West, S.C.2
-
40
-
-
0027772958
-
Sliding clamps of DNA polymerases
-
Kuriyan J., and O'Donnell M. Sliding clamps of DNA polymerases. J. Mol. Biol. 234 (1993) 915-925
-
(1993)
J. Mol. Biol.
, vol.234
, pp. 915-925
-
-
Kuriyan, J.1
O'Donnell, M.2
-
41
-
-
33744951869
-
Escherichia coli RecQ is a rapid, efficient, and monomeric helicase
-
Zhang X.D., Dou S.X., Xie P., Hu J.S., Wang P.Y., and Xi X.G. Escherichia coli RecQ is a rapid, efficient, and monomeric helicase. J. Biol. Chem. 281 (2006) 12655-12663
-
(2006)
J. Biol. Chem.
, vol.281
, pp. 12655-12663
-
-
Zhang, X.D.1
Dou, S.X.2
Xie, P.3
Hu, J.S.4
Wang, P.Y.5
Xi, X.G.6
-
42
-
-
0037474547
-
A dimer of Escherichia coli UvrD is the active form of the helicase in vitro
-
Maluf N.K., Fischer C.J., and Lohman T.M. A dimer of Escherichia coli UvrD is the active form of the helicase in vitro. J. Mol. Biol. 325 (2003) 913-935
-
(2003)
J. Mol. Biol.
, vol.325
, pp. 913-935
-
-
Maluf, N.K.1
Fischer, C.J.2
Lohman, T.M.3
-
43
-
-
0037441549
-
Strategies for structural proteomics of prokaryotes: quantifying the advantages of studying orthologous proteins and of using both NMR and X-ray crystallography approaches
-
Savchenko A., Yee A., Khachatryan A., Skarina T., Evdokimova E., Pavlova M., et al. Strategies for structural proteomics of prokaryotes: quantifying the advantages of studying orthologous proteins and of using both NMR and X-ray crystallography approaches. Proteins: Struct. Funct. Genet. 50 (2003) 392-399
-
(2003)
Proteins: Struct. Funct. Genet.
, vol.50
, pp. 392-399
-
-
Savchenko, A.1
Yee, A.2
Khachatryan, A.3
Skarina, T.4
Evdokimova, E.5
Pavlova, M.6
-
44
-
-
0017184389
-
A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
-
Bradford M.M. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal. Biochem. 72 (1976) 248-254
-
(1976)
Anal. Biochem.
, vol.72
, pp. 248-254
-
-
Bradford, M.M.1
-
46
-
-
4444378435
-
The solubility and stability of recombinant proteins are increased by their fusion to NusA
-
De Marco V., Stier G., Blandin S., and de Marco A. The solubility and stability of recombinant proteins are increased by their fusion to NusA. Biochem. Biophys. Res. Commun. 322 (2004) 766-771
-
(2004)
Biochem. Biophys. Res. Commun.
, vol.322
, pp. 766-771
-
-
De Marco, V.1
Stier, G.2
Blandin, S.3
de Marco, A.4
-
47
-
-
0033377664
-
EMAN: semiautomated software for high-resolution single-particle reconstructions
-
Ludtke S.J., Baldwin P.R., and Chiu W. EMAN: semiautomated software for high-resolution single-particle reconstructions. J. Struct. Biol. 128 (1999) 82-97
-
(1999)
J. Struct. Biol.
, vol.128
, pp. 82-97
-
-
Ludtke, S.J.1
Baldwin, P.R.2
Chiu, W.3
-
48
-
-
33846202165
-
An expanded conformation of single-ring GroEL-GroES complex encapsulates an 86 kDa substrate
-
Chen D.H., Song J.L., Chuang D.T., Chiu W., and Ludtke S.J. An expanded conformation of single-ring GroEL-GroES complex encapsulates an 86 kDa substrate. Structure 14 (2006) 1711-1722
-
(2006)
Structure
, vol.14
, pp. 1711-1722
-
-
Chen, D.H.1
Song, J.L.2
Chuang, D.T.3
Chiu, W.4
Ludtke, S.J.5
|