Increasing specificity in functional magnetic resonance imaging by estimation of vessel size based on changes in blood oxygenation

NeuroImage

Volumn 40, Issue 1, 2008, Pages 228-236

  Jochimsen, Thies H ^a   Möller, Harald E ^a  

^a MAX PLANCK INSTITUTE FOR HUMAN COGNITIVE AND BRAIN SCIENCES   (Germany)

Author keywords

BOLD; Dephasing; fMRI; Multi echo; Parallel imaging; Vessel size imaging

Indexed keywords

ARTERY DIAMETER; ARTICLE; BLOOD OXYGENATION; BLOOD VESSEL; CORRELATION ANALYSIS; DIAGNOSTIC ACCURACY; FILTER; FUNCTIONAL MAGNETIC RESONANCE IMAGING; HUMAN; MICROVASCULATURE; OPTICAL RESOLUTION; PREDICTION; PRIORITY JOURNAL; VASODILATATION; VEIN DIAMETER;

ADULT; ALGORITHMS; BLOOD VESSELS; BRAIN MAPPING; CALIBRATION; CAPILLARIES; CEREBROVASCULAR CIRCULATION; COMPUTER SIMULATION; CONTRAST MEDIA; ECHO-PLANAR IMAGING; FEMALE; HEMOGLOBINS; HUMANS; IMAGE PROCESSING, COMPUTER-ASSISTED; MAGNETIC RESONANCE IMAGING; MALE; MONTE CARLO METHOD; OXYGEN;

EID: 38949129341     PISSN: 10538119     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.neuroimage.2007.10.050     Document Type: Article

References (39)

1. 2 changes: simulations using a deterministic diffusion model. Int. J. Imaging Syst. Technol. 6 (1995) 133-152
2. Bandettini P.A., Wong E.C., Jesmanowicz A., Hinks R.S., and Hyde J.S. Spin-echo and gradient-echo EPI of human brain activation using BOLD contrast: a comparative study at 1.5 T. NMR Biomed. 7 (1994) 12-20
3. Barth M., and Norris D.G. Very high-resolution three-dimensional functional MRI of the human visual cortex with elimination of large venous vessels. NMR Biomed. 20 (2007) 477-484
4. Boxerman J.L., Bandettini P.A., Kwong K.K., Baker J.R., Davis T.L., Rosen B.R., and Weisskoff R.M. The intravascular contribution to fMRI signal change: Monte Carlo modeling and diffusion-weighted studies in vivo. Magn. Reson. Med. 34 (1995) 4-10
5. Boxerman J.L., Hamberg L.M., Rosen B.P., and Weisskoff R.M. MR contrast due to intravascular magnetic susceptibility perturbations. Magn. Reson. Med. 34 (1995) 555-566
6. Dennie J., Mandeville J.B., Boxerman J.L., Packard S.D., Rosen B.R., and Weisskoff R.M. NMR imaging of changes in vascular morphology due to tumor angiogenesis. Magn. Reson. Med. 40 (1998) 793-799
7. Donahue M.J., Lu H., Jones C.K., Edden R.A.E., Pekar J.J., and van Zijl P.C.M. Theoretical and experimental investigation of the vaso contrast mechanism. Magn. Reson. Med. 56 (2006) 1261-1273
8. Fisel C.R., Ackerman J.L., Buxton R.B., Garrido L., Belliveau J.W., Rosen B.R., and Brady T.J. MR contrast due to microscopically heterogenous magnetic susceptibility: numerical simulations and applications to cerebral physiology. Magn. Reson. Med. 17 (1991) 336-347
9. Gati J.S., Menon R.S., Uǧurbil K., and Rutt B.K. Experimental determination of the BOLD field strength dependence in vessel and tissue. Magn. Reson. Med. 38 (1997) 296-302
10. Griswold M.A., Jakob P.M., Heidemann R.M., Nittka M., Jellus V., Wang J., Kiefer B., and Haase A. Generalized autocalibrating partially parallel acquisition (GRAPPA). Magn. Reson. Med. 47 (2002) 1202-1210
11. Hoogenraad F.G.C., Reichenbach J.R., Haacke E.M., Lai S., Kuppusamy K., and Sprenger M. In vivo measurement of changes in venous blood-oxygenation with high resolution functional MRI at 0.95 Tesla by measuring changes in susceptibility and velocity. Magn. Reson. Med. 39 (1998) 97-107
12. Jensen J.H., and Chandra R. MR imaging of microvasculature. Magn. Reson. Med. 44 (2000) 224-230
13. Jochimsen T.H., and Möller H.E. Quantifying venous flow dynamics by flow-dephased and flow-rephased functional magnetic resonance imaging. Magn. Reson. Mater. Phys. Biol. Med. (MAGMA) 18 (2005) 272-275
14. Jochimsen T.H., Norris D.G., Mildner T., and Möller H.E. Quantifying the intra- and extravascular contributions to spin-echo fMRI at 3 T. Magn. Reson. Med. 52 (2004) 724-732
15. Jochimsen T.H., Norris D.G., and Möller H.E. Is there a change in water proton density associated with functional magnetic resonance imaging?. Magn. Reson. Med. 53 (2005) 470-473
16. Jochimsen T.H., Schäfer A., Bammer R., and Moseley M.E. Efficient simulation of magnetic resonance imaging with Bloch-Torrey equations using intra-voxel magnetization gradients. J. Magn. Reson. 179 (2006) 278-287
17. Jochimsen T.H., and von Mengershausen M. ODIN - object-oriented development interface for NMR. J. Magn. Reson. 170 (2004) 67-78
18. Kiselev V.G., and Posse S. Analytical model of susceptibility-induced MR signal dephasing: effect of diffusion in a microvascular network. Magn. Reson. Med. 41 (1999) 499-509
19. Kiselev V.G., Strecker R., Ziyeh S., Speck O., and Hennig J. Vessel size imaging in humans. Magn. Reson. Med. 53 (2005) 553-563
20. Lee A.T., Glover G.H., and Meyer G.H. Discrimination of large venous vessels in time-course spiral blood-oxygen-level-dependent magnetic resonance functional neuroimaging. Magn. Reson. Med. 33 (1995) 745-754
21. Lu H., Golay X., Pekar J.J., and van Zijl P.C.M. Functional magnetic resonance imaging based on changes in vascular space occupancy. Magn. Reson. Med. 50 (2003) 263-274
22. Lu H., and van Zijl P.C.M. Experimental measurement of extravascular parenchymal BOLD effects and tissue oxygen extraction fractions using multi-echo VASO fMRI at 1.5 and 3.0 T. Magn. Reson. Med. 53 (2005) 808-816
23. Ma J., and Wehrli F. Method for image-based measurement of the reversible and irreversible contribution to the transverse-relaxation rate. J. Magn. Reson., Ser. B 111 (1996) 61-69
24. Menon R.S. Postacquisition suppression of large-vessel BOLD signals in high-resolution fMRI. Magn. Reson. Med. 47 (2001) 1-9
25. Menon R.S., Ogawa S., Tank D.W., and Uǧurbil K. 4 Tesla gradient recalled echo characteristics of photic stimulation-induced signal changes in the human primary visual cortex. Magn. Reson. Med. 30 (1993) 380-386
26. Ogawa S., Lee T., Kay A.R., and Tank D.W. Brain magnetic resonance imaging with contrast dependent on blood oxygenation. Proc. Natl. Acad. Sci. 87 (1990) 9868-9872
27. Press W., Teukolsky S., Vetterling W., and Flannery B. Numerical Recipes in C (Second Edition) (1996), Cambridge Univ. Press
28. 2* in cat brain during hypoxia and hypercapnia. NeuroImage 6 (1997) 191-200
29. Qu P., Shen G.X., Wang C., Wu B., and Yuan J. Tailored utilization of acquired k-space points for GRAPPA reconstruction. J. Magn. Reson. 174 (2005) 60-67
30. Reichenbach J.R., and Haacke E.M. High-resolution BOLD venographic imaging: a window into brain function. NMR Biomed. 14 (2001) 453-467
31. Song A.W., Wong E.C., Tan S.G., and Hyde J.S. Diffusion weighted fMRI at 1.5 T. Magn. Reson. Med. 35 (1996) 155-158
32. 2* by multiple acquisition of spin and gradient echoes using interleaved echo planar imaging (MASAGE-EPI). NeuroImage 15 (2002) 992-1002
33. Troprès I., Grimault S., Vaeth A., Grillon E., Julien C., Payen J.-F., Lamalle L., and Décorps M. Vessel size imaging. Magn. Reson. Med. 45 (2001) 397-408
34. Turner R. How much cortex can a vein drain? Downstream dilution of activation-related cerebral blood oxygenation changes. NeuroImage 16 (2002) 1062-1067
35. Wang Z., Wang J., and Detre J.A. Improved data reconstruction method for GRAPPA. Magn. Reson. Med. 54 (2005) 738-742
36. Wansapura J.P., Holland S.K., Dunn R.S., and Ball W.S. NMR relaxation times in the human brain at 3.0 Tesla. J. Magn. Reson. Imaging 9 (1999) 531-538
37. 2 distributions and water contents in normal human brain. Magn. Reson. Med. 37 (1997) 34-43
38. Yablonskiy D.A., and Haacke E.M. Theory of NMR signal behavior in magnetically inhomogeneous tissues: the static dephasing regime. Magn. Reson. Med. 32 (1994) 749-763
39. 2 in the presence of static and RF magnetic field inhomogeneities. Magn. Reson. Med. 37 (1997) 872-876