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Volumn 128, Issue 1-2, 2008, Pages 126-135

Typing of Clostridium perfringens by multiple-locus variable number of tandem repeats analysis

Author keywords

Clostridium perfringens; Multiple locus variable number of tandem repeats

Indexed keywords

DNA;

EID: 38849084528     PISSN: 03781135     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.vetmic.2007.09.018     Document Type: Article
Times cited : (17)

References (25)
  • 1
    • 0001506104 scopus 로고    scopus 로고
    • Modulation of non-templated nucleotide addition by Taq DNA polymerase: primer modifications that facilitate genotyping
    • Brownstein M.J., Carpten J.D., and Smith J.R. Modulation of non-templated nucleotide addition by Taq DNA polymerase: primer modifications that facilitate genotyping. Biotechniques 20 (1996) 1004-1010
    • (1996) Biotechniques , vol.20 , pp. 1004-1010
    • Brownstein, M.J.1    Carpten, J.D.2    Smith, J.R.3
  • 2
    • 0242523875 scopus 로고    scopus 로고
    • Natural selection and the emergence of a mutation phenotype: an update of the evolutionary synthesis considering mechanisms that affect genome variation
    • Caporale L.H. Natural selection and the emergence of a mutation phenotype: an update of the evolutionary synthesis considering mechanisms that affect genome variation. Annu. Rev. Microbiol. 57 (2003) 467-485
    • (2003) Annu. Rev. Microbiol. , vol.57 , pp. 467-485
    • Caporale, L.H.1
  • 3
    • 37249051355 scopus 로고    scopus 로고
    • Genetic diversity of Clostridium perfringens isolated from healthy broiler chickens at a commercial farm
    • Chalmers G., Martin S.W., Hunter D.B., Prescott J.F., Weber L.J., and Boerlin P. Genetic diversity of Clostridium perfringens isolated from healthy broiler chickens at a commercial farm. Vet. Microbiol. 127 (2008) 116-127
    • (2008) Vet. Microbiol. , vol.127 , pp. 116-127
    • Chalmers, G.1    Martin, S.W.2    Hunter, D.B.3    Prescott, J.F.4    Weber, L.J.5    Boerlin, P.6
  • 4
    • 0031750390 scopus 로고    scopus 로고
    • Genetic diversity in the Mycobacterium tuberculosis complex based on variable numbers of tandem DNA repeats
    • Frothingham R., and Meeker-O'Connell W.A. Genetic diversity in the Mycobacterium tuberculosis complex based on variable numbers of tandem DNA repeats. Microbiology 144 (1998) 1189-1196
    • (1998) Microbiology , vol.144 , pp. 1189-1196
    • Frothingham, R.1    Meeker-O'Connell, W.A.2
  • 6
    • 0023738045 scopus 로고
    • Numerical index of the discriminatory ability of typing systems: an application of Simpson's index of diversity
    • Hunter P.R., and Gaston M.A. Numerical index of the discriminatory ability of typing systems: an application of Simpson's index of diversity. J. Clin. Microbiol. 26 (1988) 2465-2466
    • (1988) J. Clin. Microbiol. , vol.26 , pp. 2465-2466
    • Hunter, P.R.1    Gaston, M.A.2
  • 7
    • 30744458611 scopus 로고    scopus 로고
    • Multiple-locus variable-number tandem repeat analysis for typing of Staphylococcus epidermidis
    • Johansson A., Koskiniemi S., Gottfridsson P., Wistrom J., and Monsen T. Multiple-locus variable-number tandem repeat analysis for typing of Staphylococcus epidermidis. J. Clin. Microbiol. 44 (2006) 260-265
    • (2006) J. Clin. Microbiol. , vol.44 , pp. 260-265
    • Johansson, A.1    Koskiniemi, S.2    Gottfridsson, P.3    Wistrom, J.4    Monsen, T.5
  • 9
    • 0023256559 scopus 로고
    • Slipped-strand mispairing: a major mechanism for DNA sequence evolution
    • Levinson G., and Gutman G.A. Slipped-strand mispairing: a major mechanism for DNA sequence evolution. Mol. Biol. Evol. 4 (1987) 203-221
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 203-221
    • Levinson, G.1    Gutman, G.A.2
  • 10
    • 3242673571 scopus 로고    scopus 로고
    • Multiple-locus variable-number tandem-repeats analysis of Escherichia coli O157 using PCR multiplexing and multi-colored capillary electrophoresis
    • Lindstedt B.A., Vardund T., and Kapperud G. Multiple-locus variable-number tandem-repeats analysis of Escherichia coli O157 using PCR multiplexing and multi-colored capillary electrophoresis. J. Microbiol. Methods 58 (2004) 213-222
    • (2004) J. Microbiol. Methods , vol.58 , pp. 213-222
    • Lindstedt, B.A.1    Vardund, T.2    Kapperud, G.3
  • 12
    • 33847045519 scopus 로고    scopus 로고
    • A cautionary tale: the lack of consistency in allele sizes between two laboratories for a published multi-locus microsatellite typing (MLMT) system
    • Pasqualotto A.C., Denning D.W., and Anderson M.J. A cautionary tale: the lack of consistency in allele sizes between two laboratories for a published multi-locus microsatellite typing (MLMT) system. J. Clin. Microbiol. 45 (2006) 522-528
    • (2006) J. Clin. Microbiol. , vol.45 , pp. 522-528
    • Pasqualotto, A.C.1    Denning, D.W.2    Anderson, M.J.3
  • 13
    • 0033105216 scopus 로고    scopus 로고
    • Clostridium perfringens: toxinotype and genotype
    • Petit L., Gibert M., and Popoff M.R. Clostridium perfringens: toxinotype and genotype. Trends Microbiol. 7 (1999) 104-110
    • (1999) Trends Microbiol. , vol.7 , pp. 104-110
    • Petit, L.1    Gibert, M.2    Popoff, M.R.3
  • 15
    • 0031726607 scopus 로고    scopus 로고
    • Virulence genes of Clostridium perfringens
    • Rood J.I. Virulence genes of Clostridium perfringens. Annu. Rev. Microbiol. 52 (1998) 333-360
    • (1998) Annu. Rev. Microbiol. , vol.52 , pp. 333-360
    • Rood, J.I.1
  • 16
    • 0025824660 scopus 로고
    • Molecular genetics and pathogenesis of Clostridium perfringens
    • Rood J.I., and Cole S.T. Molecular genetics and pathogenesis of Clostridium perfringens. Microbiol. Rev. 55 (1991) 621-648
    • (1991) Microbiol. Rev. , vol.55 , pp. 621-648
    • Rood, J.I.1    Cole, S.T.2
  • 17
    • 23744490429 scopus 로고    scopus 로고
    • Multiple-locus variable-number tandem repeat analysis for strain typing of Clostridium perfringens
    • Sawires Y.S., and Songer J.G. Multiple-locus variable-number tandem repeat analysis for strain typing of Clostridium perfringens. Anaerobe 11 (2005) 262-272
    • (2005) Anaerobe , vol.11 , pp. 262-272
    • Sawires, Y.S.1    Songer, J.G.2
  • 19
    • 0029915545 scopus 로고    scopus 로고
    • Clostridial enteric diseases of domestic animals
    • Songer J.G. Clostridial enteric diseases of domestic animals. Clin. Microbiol. Rev. 9 (1996) 216-234
    • (1996) Clin. Microbiol. Rev. , vol.9 , pp. 216-234
    • Songer, J.G.1
  • 20
    • 0029873641 scopus 로고    scopus 로고
    • Reduced extension temperatures required for PCR amplification of extremely A + T-rich DNA
    • Su X.Z., Wu Y., Sifri C.D., and Wellems T.E. Reduced extension temperatures required for PCR amplification of extremely A + T-rich DNA. Nucleic Acids Res. 24 (1996) 1574-1575
    • (1996) Nucleic Acids Res. , vol.24 , pp. 1574-1575
    • Su, X.Z.1    Wu, Y.2    Sifri, C.D.3    Wellems, T.E.4
  • 21
    • 0029134774 scopus 로고
    • Interpreting chromosomal DNA restriction patterns produced by pulsed-field gel electrophoresis: criteria for bacterial strain typing
    • Tenover F.C., Arbeit R.D., Goering R.V., Mickelsen P.A., Murray B.E., Persing D.H., and Swaminathan B. Interpreting chromosomal DNA restriction patterns produced by pulsed-field gel electrophoresis: criteria for bacterial strain typing. J. Clin. Microbiol. 33 (1995) 2233-2239
    • (1995) J. Clin. Microbiol. , vol.33 , pp. 2233-2239
    • Tenover, F.C.1    Arbeit, R.D.2    Goering, R.V.3    Mickelsen, P.A.4    Murray, B.E.5    Persing, D.H.6    Swaminathan, B.7
  • 22
    • 0027968068 scopus 로고
    • CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson J.D., Higgins D.G., and Gibson T.J. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22 (1994) 4673-4680
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 23
    • 5444233459 scopus 로고    scopus 로고
    • Multiple-locus variable-number tandem repeat analysis, a novel typing scheme to study the genetic relatedness and epidemiology of Enterococcus faecium isolates
    • Top J., Schouls L.M., Bonten M.J., and Willems R.J. Multiple-locus variable-number tandem repeat analysis, a novel typing scheme to study the genetic relatedness and epidemiology of Enterococcus faecium isolates. J. Clin. Microbiol. 42 (2004) 4503-4511
    • (2004) J. Clin. Microbiol. , vol.42 , pp. 4503-4511
    • Top, J.1    Schouls, L.M.2    Bonten, M.J.3    Willems, R.J.4
  • 24
    • 0345687900 scopus 로고    scopus 로고
    • Slipped-strand mispairing can function as a phase variation mechanism in Escherichia coli
    • Torres-Cruz J., and van der Woude M.W. Slipped-strand mispairing can function as a phase variation mechanism in Escherichia coli. J. Bacteriol. 185 (2003) 6990-6994
    • (2003) J. Bacteriol. , vol.185 , pp. 6990-6994
    • Torres-Cruz, J.1    van der Woude, M.W.2
  • 25
    • 0013595088 scopus 로고    scopus 로고
    • Molecular typing and epidemiological survey of prevalence of Clostridium perfringens types by multiplex PCR
    • Yoo H.S., Lee S.U., Park K.Y., and Park Y.H. Molecular typing and epidemiological survey of prevalence of Clostridium perfringens types by multiplex PCR. J. Clin. Microbiol. 35 (1997) 228-232
    • (1997) J. Clin. Microbiol. , vol.35 , pp. 228-232
    • Yoo, H.S.1    Lee, S.U.2    Park, K.Y.3    Park, Y.H.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.