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Benzamide 2 was originally designed for antiprotozoal (malaria) applications using total nuclear HDACs as a screening tool. Molecular modeling studies indicated that trichostatin A could overlay favorably with key elements of the apicidin pharmacophore: its ketone-containing side chain and indole moiety (similar analyses were performed using MS-275). Using modeling insights as guidance, rapid analog synthesis promptly yielded a series of potent hydroxamic acid derivatives. Incorporation of the o-hydroxy-benzamide moiety into this series as a metal chelating surrogate and further SAR development identified 2 which exhibited comparable intrinsic activity against total mammalian and protozoan nuclear HDACs. See:
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Benzamide 2 was originally designed for antiprotozoal (malaria) applications using total nuclear HDACs as a screening tool. Molecular modeling studies indicated that trichostatin A could overlay favorably with key elements of the apicidin pharmacophore: its ketone-containing side chain and indole moiety (similar analyses were performed using MS-275). Using modeling insights as guidance, rapid analog synthesis promptly yielded a series of potent hydroxamic acid derivatives. Incorporation of the o-hydroxy-benzamide moiety into this series as a metal chelating surrogate and further SAR development identified 2 which exhibited comparable intrinsic activity against total mammalian and protozoan nuclear HDACs. See:. Meinke P.T., and Liberator P.H. Curr. Med. Chem. 8 (2001) 211
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For enzyme assay procedure, see Ref. 7.
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For enzyme assay procedure, see Ref. 7.
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For cell viability assay procedure, see Ref. 7.
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For cell viability assay procedure, see Ref. 7.
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note
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A solution of the inhibitor in 10% DMSO/45% PEG-400/45% water was administered once daily ip for up to 21 days.
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