The modulating role of dissolved organic matter on spatial patterns of microbial metabolism in Lake Erie sediments

Microbial Ecology

Volumn 55, Issue 2, 2008, Pages 358-368

  Hoostal, Matthew J ^a   Bouzat, Juan L ^a  

^a BOWLING GREEN STATE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ENZYME; FRESH WATER; ORGANIC COMPOUND; PHENOL DERIVATIVE;

ARTICLE; BACTERIAL PHENOMENA AND FUNCTIONS; BACTERIUM; CARBOHYDRATE METABOLISM; CHEMISTRY; ENZYMOLOGY; GROWTH, DEVELOPMENT AND AGING; METABOLISM; MICROBIOLOGY; SEDIMENT; UNITED STATES; WATER POLLUTION;

BACTERIA; BACTERIAL PHYSIOLOGY; CARBOHYDRATE METABOLISM; ENZYMES; FRESH WATER; GEOLOGIC SEDIMENTS; GREAT LAKES REGION; ORGANIC CHEMICALS; PHENOLS; WATER POLLUTION, CHEMICAL;

EID: 38649101543     PISSN: 00953628     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00248-007-9281-7     Document Type: Article

References (45)

1. Allan J (1995) Stream ecology: Structure and function of running waters. Chapman & Hall, London
2. Amon R, Benner R (1996) Bacterial utilization of different size classes of dissolved organic matter. Limnol Oceanogr 41(1):41-51
3. Blytt HJ, Guscar TK, Butler LG (2005) Antinutritional effects and ecological significance of dietary condensed tannins may not be due to binding and inhibiting digestive enzymes. J Chem Ecol 14(6):1455-1465
4. Bossio DA, Scow KM (1995) Impact of carbon and flooding on the metabolic diversity of microbial communities in soils. Appl Environ Microbiol 61(11):4043-4050
5. Burns NM (1985) Erie: The lake that survived. Rowman and Allanheld, Totowa, NJ
6. Castillo MM, Allan JD, Sinsabaugh RL, King GW (2004) Seasonal and interannual variation of bacterial production in lowland rivers of the Orinoco basin. Appl Environ Microbiol 49(11):1400-1414
7. Chróst RJ (1991) Environmental control of the synthesis and activity of aquatic microbial ectoenzymes. In: Chróst, RJ (Ed.) Microbial Enzymes in Aquatic Environments, Springer, New York, pp 29-51
8. Chróst RJ, Rai H (1993) Ectoenzyme activity and bacterial secondary production in nutrient-impoverished and nutrient-enriched freshwater mesocosms. Microb Ecol 25:131-150
9. Costerton J, Lewandowski D, Caldwell D, Korber R, Lappin-Scott H (1995) Microbial biofilms. Ann Rev Microbiol 49:711-745
10. Crump BC, Hopkinson CS, Sogin ML, Hobbie JE (2004) Microbial biogeography along an estuarine salinity gradient: combined influences of bacterial growth and residence time. Appl Environ Microbiol 70(3):1494-1505
11. Eiler A, Langenheder S, Bertilsson B, Tranvik LJ (2003) Heterotrophic bacteria growth efficiency and community structure at different natural organic carbon concentrations. Appl Environ Microbiol 69(7):3701-3709
12. Findlay SEG, Sinsabaugh RL, Sobczak WV, Hoostal M (2003) Metabolic and structural response of hyporheic microbial communities to variations in supply of dissolved organic matter. Limnol Oceanogr 48(4):1608-1617
13. Fisher H (2003) The role of biofilms in the uptake and transformation of dissolved organic matter. In: Findlay, S, Sinsabaugh, R (Eds.) Aquatic Ecosystems: Interactivity of Dissolved Organic Matter, Academic, New York
14. Foreman CM, Covert JS (2003) Linkages between dissolved organic matter composition and bacterial community structure. In: Findlay, S, Sinsabaugh, R (Eds.) Aquatic Ecosystems: Interactivity of Dissolved Organic Matter, Academic, New York
15. Foreman CM, Franchini P, Sinsabaugh RL (1998) The trophic dynamics of riverine bacterioplankton: Relationships among substrate availability, ectoenzyme kinetics, and growth. Limnol Oceanogr 43(6):1344-1352
16. Freeman C, Lock MA, Marxsen J, Jones SE (1990) Inhibitory effects of high molecular weight dissolved organic matter upon metabolic processes in biofilms from contrasting rivers and streams. Freshw Biol 24:159-166
17. Garland J, Mills A (1991) Classification and characterization of heterotrophic microbial communities on the basis of patterns of community level sole-carbon-source utilization. Appl Environ Microbiol 57(2):2351-2359
18. Gewurtz SB, Diamond ML (2001) Distribution and burdens of bioaccumulation contaminants in the Lake Erie food web. A review. Environ Rev 11:141-160
19. del Giorgio PA, Davis J (2003) Patterns in DOM lability and consumption across aquatic ecosystems. In Findlay, S, Sinsabaugh, R (Eds.) Aquatic Ecosystems: Interactivity of Dissolved Organic Matter, Academic, New York
20. Horvath RS (1972) Microbial co-metabolism and the degradation of organic compounds in nature. Bacteriol Rev 36:146-155
21. King GM, Klug MH (1982) Glucose metabolism in sediments of a eutrophic lake: Tracer analysis of uptake and product formation. Appl Environ Microbiol 44(4):1308-1317
22. Judd KE, Crump BC, Kling GW (2006) Variation in dissolved organic matter controls bacterial production and community composition. Ecology 87(8):2068-2079
23. Lahdesmaki P, Piispanen R (1992) Soil enzymology-role of protective colloid systems in the preservation of exoenzyme activities in soil. Soil Biol Biochem 24(11):1173-1177
24. Langenheder S, Lindstrom ES, Tranvik LJ (2006) Structure and function of bacterial communities emerging from different sources under identical conditions. Appl Environ Microbiol 72(1):212-220
25. Martinez J, Smith G, Steward F, Azam F (1996) Variability in ectohydrolytic enzyme activities of pelagic marine bacteria and its significance for substrate processing in the sea. Aquat Microb Ecol 10:223-230
26. Mortimer CH (1987) Fifty years of physical investigations and related limnological studies on Lake Erie, 1928-1977. J Great Lakes Res 13(4):407-435
27. Müller-Niklas G, Schuster S, Kaltenböck E, Herndl G (1994) Organic content and bacterial metabolism in amorphous aggregations of the northern Adriatic Sea. Limnol Oceanogr 39(2):58-68
28. Munawar M, Weisse T (1989) Is the 'Microbial Loop' an early warning indicator of anthropogenic stress. Hydrobiologia 188-9(1):163-174
29. Münster U, Einiö P, Nurminen J, Overbeck J (1992) Extracellular enzymes in a polyhumic lake: important regulators in detritus processing. Hydrobiologia 229(1):225-238
30. Murdiati TB, McSweeney CS, Lowry JB (1991) Complexing of toxic hydrolysable tannins of yellow-wood (Terminalia oblongata) and harendong (Clidemia hirta) with reactive substances: An approach to preventing toxicity. J Appl Toxicol 11(5):333-338
31. Nicholls KH, Hopkins GJ (1993) Recent changes in Lake Erie phytoplankton: cumulative impacts of phosphorus loading reductions and Zebra mussel introduction. J Great Lakes Res 19:637-647
32. Ohno T, Doolan KL (2001) Effects of red clover decomposition on phytotoxicity to wild mustard seedling growth. Appl Soil Ecol 16:187-192
33. Onstott TC, Phelps TJ, Kieft T, Colwell FS, Balkwill DL, Frederickson JK, Brockman FJ (1998) A global perspective on the microbial abundance and activity in the deep subsurface. In: Seckbach, J (Ed.) Enigmatic Microorganism and Life in Extreme Environments, Kluwer, The Netherlands.
34. Painter S, Marvin C, Rosa F, Reynoldson TB, Charlton MN, Fox M et al (2001) Sediment contamination in Lake Erie: a 25-year retrospective analysis. J Great Lakes Res 27(4):434-438
35. Saiya-Cork K, Sinsabaugh R, Zak D (2002) The effects of long-term nitrogen deposition on extracellular enzyme activity in an Acer saccharum forest soil. Soil Biol Biochem 34(9):1309-1315
36. Scavia D, Laird GA (1987) Bacterioplankton in Lake Michigan: dynamics, controls, and significance to carbon flux. Limnol Oceanogr 32(3):1017-1033
37. Sinsabaugh RL, Findlay S, Franchini P, Fischer D (1997) Enzymatic analysis of riverine bacterioplankton production. Limnol Oceanogr 42(1):29-38
38. Sinsabaugh RL, Foreman CM (2001) Activity profiles of bacterioplankton in a eutrophic river. Freshw Biol 46(9):1239-1249
39. Thompson A, Sinsabaugh RL (2000) Matric and particulate phosphatase and aminopeptidase activity in limetic biofilms. Aquatic Microb Ecol 21:151-159
40. Torsvik V, Oevreas L (2002) Microbial diversity and function in soil: from genes to ecosystems. Curr Opin Microbiol 5:240-245
41. Turpeinen R, Kairesalo T, Häggblom (2004) Microbial community structure and activity in arsenic-, chromium- and copper-contaminated soils. FEMS Microbiol Ecol 47(39):39-50
42. Tranvik LJ (1990) Bacterioplankton growth on fractions of dissolved organic-carbon of different molecular weights from humic and clear waters. Appl Environ Microbiol 56(6):1672-1677
43. Waldrop MP, Zak DR, Sinsabaugh RL (2004) Microbial community response to nitrogen deposition in northern forest ecosystems. Soil Biol Biochem 36(9):1443-1451
44. Wetzel RG (1992) Gradient-dominated ecosystems: Sources and regulatory functions of dissolved organic matter in freshwater ecosystems. Hydrobiologia 229:181-191
45. Zak JC, Willig MR., Moorehead DL, Wildman HG (1994) Functional diversity of microbial communities: a quantitative approach. Soil Biol Biochem 26:1101-1108