-
1
-
-
0032907038
-
Recombination and clonal groupings within Helicobacter pylori from different geographical regions
-
Achtman, M., T. Azuma, D. E. Berg, Y. Ito, G. Morelli, Z. J. Pan, S. Suerbaum, S., S. A. Thompson, A. van der Ende, and L. J. van Doorn. 1999. Recombination and clonal groupings within Helicobacter pylori from different geographical regions. Mol. Microbiol. 32:459-470.
-
(1999)
Mol. Microbiol.
, vol.32
, pp. 459-470
-
-
Achtman, M.1
Azuma, T.2
Berg, D.E.3
Ito, Y.4
Morelli, G.5
Pan, Z.J.6
Suerbaum, S.7
Thompson, S.A.8
Van Der Ende, A.9
Van Doorn, L.J.10
-
2
-
-
0030878456
-
Mechanisms involved in Helicobacter pylori-induced interleukin-8 production by a gastric cancer cell line, MKN45
-
Aihara, M., D. Tsuchimoto, H. Takizawa, A. Azuma, H. Wakebe, Y. Ohmoto, K. Imagawa, M. Kikuchi, N. Mukaida, and K. Matsushima. 1997. Mechanisms involved in Helicobacter pylori-induced interleukin-8 production by a gastric cancer cell line, MKN45. Infect. Immun. 65:3218-3224.
-
(1997)
Infect. Immun.
, vol.65
, pp. 3218-3224
-
-
Aihara, M.1
Tsuchimoto, D.2
Takizawa, H.3
Azuma, A.4
Wakebe, H.5
Ohmoto, Y.6
Imagawa, K.7
Kikuchi, M.8
Mukaida, N.9
Matsushima, K.10
-
3
-
-
0033552961
-
Genomic-sequence comparison of two unrelated isolates of the human gastric pathogen Helicobacter pylori
-
Alm, R. A., L. S. Ling, D. T. Moir, B. L. King, E. D. Brown, P. C. Doig, D. R. Smith, B. Noonan, B. C. Guild, B. L. deJonge, G. Carmel, P. J. Tummino, A. Caruso, M. Uria-Nickelsen, D. M. Mills, C. Ives, R. Gibson, D. Merberg, S. D. Mills, Q. Jiang, D. E. Taylor, G. F. Vovis, and T. J. Trust. 1999. Genomic-sequence comparison of two unrelated isolates of the human gastric pathogen Helicobacter pylori. Nature 396:176-180.
-
(1999)
Nature
, vol.396
, pp. 176-180
-
-
Alm, R.A.1
Ling, L.S.2
Moir, D.T.3
King, B.L.4
Brown, E.D.5
Doig, P.C.6
Smith, D.R.7
Noonan, B.8
Guild, B.C.9
DeJonge, B.L.10
Carmel, G.11
Tummino, P.J.12
Caruso, A.13
Uria-Nickelsen, M.14
Mills, D.M.15
Ives, C.16
Gibson, R.17
Merberg, D.18
Mills, S.D.19
Jiang, Q.20
Taylor, D.E.21
Vovis, G.F.22
Trust, T.J.23
more..
-
4
-
-
0031705619
-
Differential normalization of mucosal interleukin-8 and interleukin-6 activity after Helicobacter pylori eradication
-
Ando, T., K. Kusugami, M. Ohsuga, K. Ina, M. Shinoda, T. Konagaya, T. Sakai, A. Imada, N. Kasuga, T. Nada, S. Ichiyama, and M. J. Blaser. 1998. Differential normalization of mucosal interleukin-8 and interleukin-6 activity after Helicobacter pylori eradication. Infect. Immun. 66:4742-4747.
-
(1998)
Infect. Immun.
, vol.66
, pp. 4742-4747
-
-
Ando, T.1
Kusugami, K.2
Ohsuga, M.3
Ina, K.4
Shinoda, M.5
Konagaya, T.6
Sakai, T.7
Imada, A.8
Kasuga, N.9
Nada, T.10
Ichiyama, S.11
Blaser, M.J.12
-
5
-
-
0036136909
-
Polymorphisms of Helicobacter pylori HP0638 reflect geographic origin and correlate with cagA status
-
Ando, T., R. M. Peek, D. Pride, S. M. Levine, T. Takata, Y. C. Lee, K. Kusugami, A. van der Ende, E. J. Kuipers, J. G. Kusters, and M. J. Blaser. 2002. Polymorphisms of Helicobacter pylori HP0638 reflect geographic origin and correlate with cagA status. J. Clin. Microbiol. 40:239-246.
-
(2002)
J. Clin. Microbiol.
, vol.40
, pp. 239-246
-
-
Ando, T.1
Peek, R.M.2
Pride, D.3
Levine, S.M.4
Takata, T.5
Lee, Y.C.6
Kusugami, K.7
Van Der Ende, A.8
Kuipers, E.J.9
Kusters, J.G.10
Blaser, M.J.11
-
6
-
-
0034076187
-
Linking Helicobacter pylori to gastric cancer
-
Blaser, M. J. 2000. Linking Helicobacter pylori to gastric cancer. Nat. Med. 6:376-377.
-
(2000)
Nat. Med.
, vol.6
, pp. 376-377
-
-
Blaser, M.J.1
-
7
-
-
0029043658
-
Infection with Helicobacter pylori strains possessing cagA is associated with an increased risk of developing adenocarcinoma of the stomach
-
Blaser, M. J., G. I. Perez-Perez, H. Kleanthous, T. L. Cover, R. M. Peek, P. H. Chyou, G. N. Stemmermann, and A. Nomura. 1995. Infection with Helicobacter pylori strains possessing cagA is associated with an increased risk of developing adenocarcinoma of the stomach. Cancer Res. 55:2111-2115.
-
(1995)
Cancer Res.
, vol.55
, pp. 2111-2115
-
-
Blaser, M.J.1
Perez-Perez, G.I.2
Kleanthous, H.3
Cover, T.L.4
Peek, R.M.5
Chyou, P.H.6
Stemmermann, G.N.7
Nomura, A.8
-
8
-
-
0033591290
-
Helicobacter pylori virulence and genetic geography
-
Covacci, A., J. L. Telford, G. D. Gludice, J. Parsonnet, and R. Rappuoli. 1999. Helicobacter pylori virulence and genetic geography. Science 284:1328-1333.
-
(1999)
Science
, vol.284
, pp. 1328-1333
-
-
Covacci, A.1
Telford, J.L.2
Gludice, G.D.3
Parsonnet, J.4
Rappuoli, R.5
-
9
-
-
0037169076
-
SHP-2 tyrosine phosphatase as an intracellular target of Helicobacter pylori CagA protein
-
Higashi, H., R. Tsutsumi, S. Muto, T. Sugiyama, T. Azuma, M. Asaka, and M. Hatakeyama. 2002. SHP-2 tyrosine phosphatase as an intracellular target of Helicobacter pylori CagA protein. Science 295:683-686.
-
(2002)
Science
, vol.295
, pp. 683-686
-
-
Higashi, H.1
Tsutsumi, R.2
Muto, S.3
Sugiyama, T.4
Azuma, T.5
Asaka, M.6
Hatakeyama, M.7
-
10
-
-
0037195107
-
Biological activity of the Helicobacter pylori virulence factor CagA is determined by variation in the tyrosine phosphorylation sites
-
Higashi, H., R. Tsutsumi, A. Fujita, S. Yamazaki, M. Asaka, T. Azuma, and M. Hatakeyama. 2002. Biological activity of the Helicobacter pylori virulence factor CagA is determined by variation in the tyrosine phosphorylation sites. Proc. Natl. Acad. Sci. USA 99:14428-14433.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 14428-14433
-
-
Higashi, H.1
Tsutsumi, R.2
Fujita, A.3
Yamazaki, S.4
Asaka, M.5
Azuma, T.6
Hatakeyama, M.7
-
11
-
-
0032189467
-
Development of Helicobacter pylori-induced gastric carcinoma in Mongolian gerbils
-
Honda, S., T. Fujioka, M. Tokieda, R. Satoh, A. Nishizono, and M. Nasu. 1998. Development of Helicobacter pylori-induced gastric carcinoma in Mongolian gerbils. Cancer Res. 58:4255-4259.
-
(1998)
Cancer Res.
, vol.58
, pp. 4255-4259
-
-
Honda, S.1
Fujioka, T.2
Tokieda, M.3
Satoh, R.4
Nishizono, A.5
Nasu, M.6
-
12
-
-
12944277033
-
Differences in genotypes of Helicobacter pylori from different human populations
-
Kersulyte, D., A. K. Mukhopadhyay, B. Velapatino, W. Su, Z. Pan, C. Garcia, V. Hernandez, Y. Valdez, R. S. Mistry, R. H. Gilman, Y. Yuan, H. Gao, T. Alarcon, M. Lopez-Brea, G. Balakrish Nair, A. Chowdhury, S. Datta, M. Shirai, T. Nakazawa, R. Ally, I. Segal, B. C. Wong, S. K. Lam, F. O. Olfat, T. Boren, L. Engstrand, O. Torres, R. Schneider, J. E. Thomas, S. Czinn, and D. E. Berg. 2000. Differences in genotypes of Helicobacter pylori from different human populations. J. Bacteriol. 182:3210-3218.
-
(2000)
J. Bacteriol.
, vol.182
, pp. 3210-3218
-
-
Kersulyte, D.1
Mukhopadhyay, A.K.2
Velapatino, B.3
Su, W.4
Pan, Z.5
Garcia, C.6
Hernandez, V.7
Valdez, Y.8
Mistry, R.S.9
Gilman, R.H.10
Yuan, Y.11
Gao, H.12
Alarcon, T.13
Lopez-Brea, M.14
Balakrish Nair, G.15
Chowdhury, A.16
Datta, S.17
Shirai, M.18
Nakazawa, T.19
Ally, R.20
Segal, I.21
Wong, B.C.22
Lam, S.K.23
Olfat, F.O.24
Boren, T.25
Engstrand, L.26
Torres, O.27
Schneider, R.28
Thomas, J.E.29
Czinn, S.30
Berg, D.E.31
more..
-
13
-
-
0032944936
-
Emergence of recombinant strains of Helicobacter pylori during human infection
-
Kersulyte, D., H. Chalkauskas, and D. E. Berg. 1999. Emergence of recombinant strains of Helicobacter pylori during human infection. Mol. Microbiol. 31:31-43.
-
(1999)
Mol. Microbiol.
, vol.31
, pp. 31-43
-
-
Kersulyte, D.1
Chalkauskas, H.2
Berg, D.E.3
-
14
-
-
0032904917
-
Identification of mycobacterial species by comparative sequence analysis of the RNA polymerase gene (rpoB)
-
Kim, B. J., S. H. Lee, M. A. Lyu, S. J. Kim, G. H. Bai, S. S. Kim, G. T. Chae, E. C. Kim, C. Y. Cha, and Y. H. Kook. 1999. Identification of mycobacterial species by comparative sequence analysis of the RNA polymerase gene (rpoB). J. Clin. Microbiol. 37:1714-1720.
-
(1999)
J. Clin. Microbiol.
, vol.37
, pp. 1714-1720
-
-
Kim, B.J.1
Lee, S.H.2
Lyu, M.A.3
Kim, S.J.4
Bai, G.H.5
Kim, S.S.6
Chae, G.T.7
Kim, E.C.8
Cha, C.Y.9
Kook, Y.H.10
-
15
-
-
0036202035
-
Population genetic structure of Legionella pneumophila inferred from RNA polymerase gene (rpoB) and DotA gene (dotA) sequences
-
Ko, K. S., H. K. Lee, M. Y. Park, M. S. Park, K. H. Lee, S. Y. Woo, Y. J. Yun, and Y. H. Kook. 2002. Population genetic structure of Legionella pneumophila inferred from RNA polymerase gene (rpoB) and DotA gene (dotA) sequences. J. Bacteriol. 184:2123-2130.
-
(2002)
J. Bacteriol.
, vol.184
, pp. 2123-2130
-
-
Ko, K.S.1
Lee, H.K.2
Park, M.Y.3
Park, M.S.4
Lee, K.H.5
Woo, S.Y.6
Yun, Y.J.7
Kook, Y.H.8
-
16
-
-
0038156117
-
Detection of Helicobacter pylori in gastric mucosa of patients with gastroduodenal diseases by PCR-restriction analysis using the RNA polymerase gene (rpoB)
-
Lim, C. Y., K. H. Lee, M. J. Cho, M. W. Chang, S. Y. Kim, N. H. Myong, W. K. Lee, K. H. Rhee, and Y. H. Kook. 2003. Detection of Helicobacter pylori in gastric mucosa of patients with gastroduodenal diseases by PCR-restriction analysis using the RNA polymerase gene (rpoB). J. Clin. Microbiol. 41:3387-3391.
-
(2003)
J. Clin. Microbiol.
, vol.41
, pp. 3387-3391
-
-
Lim, C.Y.1
Lee, K.H.2
Cho, M.J.3
Chang, M.W.4
Kim, S.Y.5
Myong, N.H.6
Lee, W.K.7
Rhee, K.H.8
Kook, Y.H.9
-
17
-
-
0034965017
-
Population genetics of Helicobacter pylori in the southern part of Switzerland analysed by sequencing of four housekeeping genes (atpD, glnA, scoB and recA), and by vacA, cagA, iceA and IS605 genotyping
-
Maggi Solcà, N., M. V. Bernasconi, C. Valsangiacomo, L. J. Van Doorn, and J. C. Piffaretti. 2001. Population genetics of Helicobacter pylori in the southern part of Switzerland analysed by sequencing of four housekeeping genes (atpD, glnA, scoB and recA), and by vacA, cagA, iceA and IS605 genotyping. Microbiology 147:693-707.
-
(2001)
Microbiology
, vol.147
, pp. 693-707
-
-
Maggi Solcà, N.1
Bernasconi, M.V.2
Valsangiacomo, C.3
Van Doorn, L.J.4
Piffaretti, J.C.5
-
18
-
-
0031897789
-
Detecting recombination from gene trees
-
Maynard Smith, J., and N. H. Smith. 1998. Detecting recombination from gene trees. Mol. Biol. Evol. 15:590-599.
-
(1998)
Mol. Biol. Evol.
, vol.15
, pp. 590-599
-
-
Maynard Smith, J.1
Smith, N.H.2
-
19
-
-
0030669211
-
rpoB sequence analysis as a novel basis for bacterial identification
-
Mollet, C., M. Drancourt, and D. Raoult. 1997. rpoB sequence analysis as a novel basis for bacterial identification. Mol. Microbiol. 26:1005-1011.
-
(1997)
Mol. Microbiol.
, vol.26
, pp. 1005-1011
-
-
Mollet, C.1
Drancourt, M.2
Raoult, D.3
-
20
-
-
0030870289
-
Discovery and classification of ecological diversity in the bacterial world: The role of DNA sequence data
-
Palys, T., L. K. Nakamura, and F. M. Cohan. 1997. Discovery and classification of ecological diversity in the bacterial world: the role of DNA sequence data. Int. J. Syst. Bacteriol. 47:1145-1156.
-
(1997)
Int. J. Syst. Bacteriol.
, vol.47
, pp. 1145-1156
-
-
Palys, T.1
Nakamura, L.K.2
Cohan, F.M.3
-
21
-
-
0023375195
-
The neighbor joining method: A new method for reconstructing phylogenetic trees
-
Saitou, N., and M. Nei. 1987. The neighbor joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4:406-425.
-
(1987)
Mol. Biol. Evol.
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
22
-
-
0033825782
-
Helicobacter pylori
-
Shiotani, A., Z. Z. Nurgalieva, Y. Yamaoka, and D. Y. Graham. 2000. Helicobacter pylori. Med. Clin. N. Am. 84:1125-1136.
-
(2000)
Med. Clin. N. Am.
, vol.84
, pp. 1125-1136
-
-
Shiotani, A.1
Nurgalieva, Z.Z.2
Yamaoka, Y.3
Graham, D.Y.4
-
23
-
-
13144251208
-
Free recombination within Helicobacter pylori
-
Suerbaum, S., J. M. Smith, K. Bapumia, G. Morelli, N. H. Smith, E. Kunstmann, I. Dyrek, and M. Achtman. 1998. Free recombination within Helicobacter pylori. Proc. Natl. Acad. Sci. USA 95:12619-12624.
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.95
, pp. 12619-12624
-
-
Suerbaum, S.1
Smith, J.M.2
Bapumia, K.3
Morelli, G.4
Smith, N.H.5
Kunstmann, E.6
Dyrek, I.7
Achtman, M.8
-
24
-
-
0344271983
-
A prokaryotic and eukaryotic RNA polymerase have homologous core subunits
-
Sweetser, D., M. Nonet, and R. A. Young. 1987. A. prokaryotic and eukaryotic RNA polymerase have homologous core subunits. Proc. Natl. Acad. Sci. USA 84:1192-1196.
-
(1987)
Proc. Natl. Acad. Sci. USA
, vol.84
, pp. 1192-1196
-
-
Sweetser, D.1
Nonet, M.2
Young, R.A.3
-
26
-
-
0031574072
-
The Clustal X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
-
Thompson, J. D., T. J. Gibson, F. Plewniak, F. Jeanmougin, and D. G. Higgins. 1997. The Clustal X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 24:4876-4882.
-
(1997)
Nucleic Acids Res.
, vol.24
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
-
27
-
-
0031876199
-
Identification of Helicobacter in gastric biopsies by PCR based on 168 rDNA sequences: A matter of little significance for the prediction of H. pylori-associated gastritis?
-
Tiveljung, A., K. Borch, J. Jonasson, S. Mardh, F. Petersson, and H. J. Monstein. 1998. Identification of Helicobacter in gastric biopsies by PCR based on 168 rDNA sequences: a matter of little significance for the prediction of H. pylori-associated gastritis? J. Med. Microbiol. 47:695-704.
-
(1998)
J. Med. Microbiol.
, vol.47
, pp. 695-704
-
-
Tiveljung, A.1
Borch, K.2
Jonasson, J.3
Mardh, S.4
Petersson, F.5
Monstein, H.J.6
-
28
-
-
0035856021
-
Helicobacter pylori infection and the development of gastric cancer
-
Uemura, N., S. Okamoto, S. Yamamoto, N. Matsumura, S. Yamaguchi, M. Yamakido, K. Taniyama, N. Sasaki, and R. J. Schlemper. 2001. Helicobacter pylori infection and the development of gastric cancer. N. Engl. J. Med. 345:784-789.
-
(2001)
N. Engl. J. Med.
, vol.345
, pp. 784-789
-
-
Uemura, N.1
Okamoto, S.2
Yamamoto, S.3
Matsumura, N.4
Yamaguchi, S.5
Yamakido, M.6
Taniyama, K.7
Sasaki, N.8
Schlemper, R.J.9
-
29
-
-
0031923742
-
cagA-positive Helicobacter pylori populations in China and The Netherlands are distinct
-
van der Ende, A., Z. J. Pan, A. Bart, R. W. van der Hulst, M. Feller, S. D. Xiao, G. N. Tytgat, and J. Dankert. 1998. cagA-positive Helicobacter pylori populations in China and The Netherlands are distinct. Infect. Immun. 66:1822-1826.
-
(1998)
Infect. Immun.
, vol.66
, pp. 1822-1826
-
-
Van Der Ende, A.1
Pan, Z.J.2
Bart, A.3
Van Der Hulst, R.W.4
Feller, M.5
Xiao, S.D.6
Tytgat, G.N.7
Dankert, J.8
-
30
-
-
0036796068
-
Inflammation intersection: gp130 balances gut irritation and stomach cancer
-
Wang, T. C., and J. R. Goldenring. 2002. Inflammation intersection: gp130 balances gut irritation and stomach cancer. Nat. Med. 8:1080-1081.
-
(2002)
Nat. Med.
, vol.8
, pp. 1080-1081
-
-
Wang, T.C.1
Goldenring, J.R.2
-
31
-
-
0037165666
-
Helicobacter pylori in North and South America before Columbus
-
Yamaoka, Y., E. Orito, M. Mizokami, O. Gutierrez, N. Saitou, T. Kodama, M. S. Osato, J. G. Kim, F. C. Ramirez, V. Mahachai, and D. Y. Graham. 2002. Helicobacter pylori in North and South America before Columbus. FEBS Lett. 517:180-184.
-
(2002)
FEBS Lett.
, vol.517
, pp. 180-184
-
-
Yamaoka, Y.1
Orito, E.2
Mizokami, M.3
Gutierrez, O.4
Saitou, N.5
Kodama, T.6
Osato, M.S.7
Kim, J.G.8
Ramirez, F.C.9
Mahachai, V.10
Graham, D.Y.11
-
32
-
-
0031878592
-
Variants of the 3′ region of the cagA gene in Helicobacter pylori isolates from patients with different H. pylori-associated diseases
-
Yamaoka, Y., T. Kodama, K. Kashima, D. Y. Graham, and A. R. Sepulveda. 1998. Variants of the 3′ region of the cagA gene in Helicobacter pylori isolates from patients with different H. pylori-associated diseases. J. Clin. Microbiol. 36:2258-2263.
-
(1998)
J. Clin. Microbiol.
, vol.36
, pp. 2258-2263
-
-
Yamaoka, Y.1
Kodama, T.2
Kashima, K.3
Graham, D.Y.4
Sepulveda, A.R.5
-
33
-
-
0034691065
-
A Mr 34,000 proinflammatory outer membrane protein (OipA) of Helicobacter pylori
-
Yamaoka, Y., D. H. Kwon, and D. Y. Graham. 2000. A Mr 34,000 proinflammatory outer membrane protein (OipA) of Helicobacter pylori. Proc. Natl. Acad. Sci. USA 97:7533-7538.
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 7533-7538
-
-
Yamaoka, Y.1
Kwon, D.H.2
Graham, D.Y.3
-
34
-
-
0032584668
-
The largest subunits of RNA polymerase from gastric helicobacters are tethered
-
Zakharova, N., P. S. Hoffman, D. E. Berg, and K. Severinov. 1998. The largest subunits of RNA polymerase from gastric helicobacters are tethered. J. Biol. Chem. 273:19371-19374.
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 19371-19374
-
-
Zakharova, N.1
Hoffman, P.S.2
Berg, D.E.3
Severinov, K.4
|