메뉴 건너뛰기




Volumn 32, Issue 3, 2004, Pages 986-997

Molecular phylogeny of the hexagrammid fishes using a multi-locus approach

Author keywords

Hexagrammidae; Intron; Molecular phylogeny; mtDNA; Multiple loci

Indexed keywords

CALMODULIN; CREATINE KINASE; LACTATE DEHYDROGENASE; MITOCHONDRIAL DNA; RIBOSOME DNA;

EID: 3843073219     PISSN: 10557903     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.ympev.2004.03.012     Document Type: Article
Times cited : (28)

References (53)
  • 1
    • 0343964760 scopus 로고
    • The blood vasuclar system of the loricati, the mail-cheeked fishes
    • Allen W.F. The blood vasuclar system of the loricati, the mail-cheeked fishes. Proceedings of the Washington Academy of Science. 7:1905;27-157
    • (1905) Proceedings of the Washington Academy of Science , vol.7 , pp. 27-157
    • Allen, W.F.1
  • 5
    • 0002534932 scopus 로고    scopus 로고
    • First finding of Hexagrammos agrammus × H. octogrammus hybrids and new data about occurrnece of H. agrammus (Hexagrammidae) in Peter the Great Bay (Sea of Japan)
    • Balanov A.A, Antonenko D.V. First finding of Hexagrammos agrammus × H. octogrammus hybrids and new data about occurrnece of H. agrammus (Hexagrammidae) in Peter the Great Bay (Sea of Japan). Journal of Ichthyology. 39:1999;149-156
    • (1999) Journal of Ichthyology , vol.39 , pp. 149-156
    • Balanov, A.A.1    Antonenko, D.V.2
  • 6
    • 3843107569 scopus 로고    scopus 로고
    • The first occurrence of hybrids of Hexagrammos otakii × H. octogrammus and description of H. otakii (Hexagrammidae) from Peter the Great Bay (Sea of Japan)
    • Balanov A.A, Markevich A.I, Antonenko D.V, Crow K.D. The first occurrence of hybrids of Hexagrammos otakii × H. octogrammus and description of H. otakii (Hexagrammidae) from Peter the Great Bay (Sea of Japan). Journal of Ichthyology. 41:2001;28-738
    • (2001) Journal of Ichthyology , vol.41 , pp. 28-738
    • Balanov, A.A.1    Markevich, A.I.2    Antonenko, D.V.3    Crow, K.D.4
  • 9
    • 0001202453 scopus 로고    scopus 로고
    • Universal PCR primer for calmodulin gene intron in fish
    • Chow S. Universal PCR primer for calmodulin gene intron in fish. Fisheries Science. 64:1998;999-1000
    • (1998) Fisheries Science , vol.64 , pp. 999-1000
    • Chow, S.1
  • 10
    • 0032170904 scopus 로고    scopus 로고
    • Universal PCR primers for S7 ribosomal protein gene introns in fish
    • Chow S, Hazama K. Universal PCR primers for S7 ribosomal protein gene introns in fish. Molecular Ecology. 7:1998;1255-1256
    • (1998) Molecular Ecology , vol.7 , pp. 1255-1256
    • Chow, S.1    Hazama, K.2
  • 11
    • 0043074683 scopus 로고    scopus 로고
    • Assessing the phylogenetic utility of four mitochondrial genes and a nuclear intron in the Asian pit viper genus, Trimeresurus: Separate, simultaneous, and conditional data combination analyses
    • Creer S, Malhotra A, Thorpe R.S. Assessing the phylogenetic utility of four mitochondrial genes and a nuclear intron in the Asian pit viper genus, Trimeresurus: separate, simultaneous, and conditional data combination analyses. Molecular Biology and Evolution. 20:2003;1240-1251
    • (2003) Molecular Biology and Evolution , vol.20 , pp. 1240-1251
    • Creer, S.1    Malhotra, A.2    Thorpe, R.S.3
  • 13
    • 0031000165 scopus 로고    scopus 로고
    • Evidence for multiple maternal contributors in nests of kelp greenling (Hexagrammos decagrammus, Hexagrammidae)
    • Crow K.D, Powers D.A, Bernardi G. Evidence for multiple maternal contributors in nests of kelp greenling (Hexagrammos decagrammus, Hexagrammidae). Copeia. 1997;9-15
    • (1997) Copeia , pp. 9-15
    • Crow, K.D.1    Powers, D.A.2    Bernardi, G.3
  • 14
    • 12044251056 scopus 로고
    • For consensus (sometimes)
    • Dequeiroz A. For consensus (sometimes). Systematic Biology. 42:1993;368-372
    • (1993) Systematic Biology , vol.42 , pp. 368-372
    • Dequeiroz, A.1
  • 16
    • 0000461280 scopus 로고
    • Confidence-limits on phylogenies-an approach using the bootstrap
    • Felsenstein J. Confidence-limits on phylogenies-an approach using the bootstrap. Evolution. 39:1985;783-791
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 17
    • 3843141218 scopus 로고
    • On the osteology of some of the Loricati
    • Gutberlet J.E. On the osteology of some of the Loricati. Illinois Biological Monographs. 2:(2):1915;1-40
    • (1915) Illinois Biological Monographs , vol.2 , Issue.2 , pp. 1-40
    • Gutberlet, J.E.1
  • 18
    • 0002821517 scopus 로고    scopus 로고
    • Linking evolutionary pattern and process
    • D.J. Howard, & S.H. Berlocher. New York: Oxford University Press
    • Harrison R.G. Linking evolutionary pattern and process. Howard D.J, Berlocher S.H. Endless Forms: Species and Speciation. 1998;19-31 Oxford University Press, New York
    • (1998) Endless Forms: Species and Speciation , pp. 19-31
    • Harrison, R.G.1
  • 20
    • 0026562079 scopus 로고
    • The number of replications needed for accurate estimation of the bootstrap-p value in phylogenetic studies
    • Hedges S.B. The number of replications needed for accurate estimation of the bootstrap- p value in phylogenetic studies. Molecular Biology and Evolution. 9:1992;366-369
    • (1992) Molecular Biology and Evolution , vol.9 , pp. 366-369
    • Hedges, S.B.1
  • 22
    • 12044253190 scopus 로고
    • An empirical test of bootstrapping as a method for assessing confidence in phylogenetic analysis
    • Hillis D.M, Bull J.J. An empirical test of bootstrapping as a method for assessing confidence in phylogenetic analysis. Systematic Biology. 42:1993;182-192
    • (1993) Systematic Biology , vol.42 , pp. 182-192
    • Hillis, D.M.1    Bull, J.J.2
  • 23
    • 0034849408 scopus 로고    scopus 로고
    • MRBAYES: Bayesian inference of phylogenetic trees
    • Huelsenbeck J.P, Ronquist F. MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics. 17:2001;754-755
    • (2001) Bioinformatics , vol.17 , pp. 754-755
    • Huelsenbeck, J.P.1    Ronquist, F.2
  • 25
    • 0024307824 scopus 로고
    • Evaluation of the maximum-likelihood estimate of the evolutionary tree topologies from DNA-sequence data, and the branching order in Hominoidea
    • Kishino H, Hasegawa M. Evaluation of the maximum-likelihood estimate of the evolutionary tree topologies from DNA-sequence data, and the branching order in Hominoidea. Journal of Molecular Evolution. 29:1989;170-179
    • (1989) Journal of Molecular Evolution , vol.29 , pp. 170-179
    • Kishino, H.1    Hasegawa, M.2
  • 28
    • 0031504952 scopus 로고    scopus 로고
    • Gene trees in species trees
    • Maddison W.P. Gene trees in species trees. Systematic Biology. 46:1997;523-536
    • (1997) Systematic Biology , vol.46 , pp. 523-536
    • Maddison, W.P.1
  • 29
    • 0003139107 scopus 로고    scopus 로고
    • The relative rate of sympatric and allopatric speciation in fishes
    • D.J. Howard, & S.H. Berlocher. New York: Oxford University Press
    • McCune A.R, Lovejoy N.R. The relative rate of sympatric and allopatric speciation in fishes. Howard D.J, Berlocher S.H. Endless Forms: Species and Speciation. 1998;Oxford University Press, New York
    • (1998) Endless Forms: Species and Speciation
    • McCune, A.R.1    Lovejoy, N.R.2
  • 31
    • 0025066547 scopus 로고
    • Monophyletic origin of Lake Victoria cichlid fishes suggested by mitochondrial-DNA sequences
    • Meyer A, Kocher T.D, Basasibwaki P, Wilson A.C. Monophyletic origin of Lake Victoria cichlid fishes suggested by mitochondrial-DNA sequences. Nature. 347:1990;550-553
    • (1990) Nature , vol.347 , pp. 550-553
    • Meyer, A.1    Kocher, T.D.2    Basasibwaki, P.3    Wilson, A.C.4
  • 32
    • 0000058501 scopus 로고
    • Inferring phylogenies from mtdna variation - Mitochondrial-gene trees versus nuclear-gene trees
    • Moore W.S. Inferring phylogenies from mtdna variation - mitochondrial-gene trees versus nuclear-gene trees. Evolution. 49:1995;718-726
    • (1995) Evolution , vol.49 , pp. 718-726
    • Moore, W.S.1
  • 33
    • 0034350066 scopus 로고    scopus 로고
    • Spawning behavior and interspecific breeding in three Japanese greenlings (Hexagrammidae)
    • Munehara H, Kanamoto Z, Miura T. Spawning behavior and interspecific breeding in three Japanese greenlings (Hexagrammidae). Ichthyological Research. 47:2000;287-292
    • (2000) Ichthyological Research , vol.47 , pp. 287-292
    • Munehara, H.1    Kanamoto, Z.2    Miura, T.3
  • 34
    • 0034534606 scopus 로고    scopus 로고
    • Microsatellite markers and multiple paternity in a paternal care fish, Hexagrammos otakii
    • Munehara H, Takenaka O. Microsatellite markers and multiple paternity in a paternal care fish, Hexagrammos otakii. Journal of Ethology. 18:2000;101-104
    • (2000) Journal of Ethology , vol.18 , pp. 101-104
    • Munehara, H.1    Takenaka, O.2
  • 36
    • 0035400648 scopus 로고    scopus 로고
    • Gene trees and species trees are not the same
    • Nichols R. Gene trees and species trees are not the same. Trends in Ecology and Evolution. 16:2001;358-364
    • (2001) Trends in Ecology and Evolution , vol.16 , pp. 358-364
    • Nichols, R.1
  • 37
    • 0033936591 scopus 로고    scopus 로고
    • Extracting species trees from complex gene trees: Reconciled trees and vertebrate phylogeny
    • Page R.D.M. Extracting species trees from complex gene trees: reconciled trees and vertebrate phylogeny. Molecular Phylogenetics and Evolution. 14:2000;89-106
    • (2000) Molecular Phylogenetics and Evolution , vol.14 , pp. 89-106
    • Page, D.M.1
  • 38
    • 0031110886 scopus 로고    scopus 로고
    • From gene to organismal phylogeny: Reconciled trees and the gene tree species tree problem
    • Page R.D.M, Charleston M.A. From gene to organismal phylogeny: reconciled trees and the gene tree species tree problem. Molecular Phylogenetics and Evolution. 7:1997;231-240
    • (1997) Molecular Phylogenetics and Evolution , vol.7 , pp. 231-240
    • Page, D.M.1    Charleston, M.A.2
  • 39
    • 3843145731 scopus 로고
    • Labraces, novum genus, piscium, oceani orientalis
    • Pallas P.S. Labraces, novum genus, piscium, oceani orientalis. Mem. Acad. Sci. St. Petersh. 2:1810;382-398
    • (1810) Mem. Acad. Sci. St. Petersh , vol.2 , pp. 382-398
    • Pallas, P.S.1
  • 40
    • 0023822631 scopus 로고
    • Relationships between gene trees and species trees
    • Pamilo P, Nei M. Relationships between gene trees and species trees. Molecular Biology and Evolution. 5:1988;568-583
    • (1988) Molecular Biology and Evolution , vol.5 , pp. 568-583
    • Pamilo, P.1    Nei, M.2
  • 41
    • 0002610619 scopus 로고
    • Meristic variation in the hexagrammid fishes
    • Quast J.C. Meristic variation in the hexagrammid fishes. Fishery Bulletin. 63:1964;589-609
    • (1964) Fishery Bulletin , vol.63 , pp. 589-609
    • Quast, J.C.1
  • 42
    • 0033524902 scopus 로고    scopus 로고
    • Amplification primers that target locus-specific introns in actinopterygian fishes
    • Quattro J.M, Jones W.J. Amplification primers that target locus-specific introns in actinopterygian fishes. Copeia. 1999;191-196
    • (1999) Copeia , pp. 191-196
    • Quattro, J.M.1    Jones, W.J.2
  • 43
    • 0034782325 scopus 로고    scopus 로고
    • Gene-gene concordance and the phylogenetic relationships amone rare and widespread pygmy sunfishes (Genus Elassoma)
    • Quattro J.M, Jones W.J, Grady J.M, Rohde F.C. Gene-gene concordance and the phylogenetic relationships amone rare and widespread pygmy sunfishes (Genus Elassoma). Molecular Phylogenetics and Evolution. 18:2001;217-226
    • (2001) Molecular Phylogenetics and Evolution , vol.18 , pp. 217-226
    • Quattro, J.M.1    Jones, W.J.2    Grady, J.M.3    Rohde, F.C.4
  • 44
    • 0242365676 scopus 로고    scopus 로고
    • Genome-scale approaches to resolving incongruence in molecular phylogenies
    • Rokas A, Williams B.L, King N, Carroll S.B. Genome-scale approaches to resolving incongruence in molecular phylogenies. Nature. 425:2003;798-804
    • (2003) Nature , vol.425 , pp. 798-804
    • Rokas, A.1    Williams, B.L.2    King, N.3    Carroll, S.B.4
  • 45
    • 0010399833 scopus 로고
    • Survey of the fishes of the family Hexagrammidae
    • T.S. Rass. Springfield, Virginia: U.S. Department of Commerce
    • Rutenberg E.P. Survey of the fishes of the family Hexagrammidae. Rass T.S. Greenlings: Taxonomy, Biology, and Interoceanic Transplantation. 1962;U.S. Department of Commerce, Springfield, Virginia
    • (1962) Greenlings: Taxonomy, Biology, and Interoceanic Transplantation
    • Rutenberg, E.P.1
  • 47
    • 0032766857 scopus 로고    scopus 로고
    • Multiple comparisons of log-likelihoods with applications to phylogenetic inference
    • Shimodaira H, Hasegawa M. Multiple comparisons of log-likelihoods with applications to phylogenetic inference. Molecular Biology and Evolution. 16:1999;1114-1116
    • (1999) Molecular Biology and Evolution , vol.16 , pp. 1114-1116
    • Shimodaira, H.1    Hasegawa, M.2
  • 48
    • 0001917153 scopus 로고
    • Comparative morphology and the phylogeny of the suborder Hexagrammoidei and related taxa (Pisces: Scorpaeniformes)
    • Hokkaido University
    • Shinohara, G., 1994. Comparative morphology and the phylogeny of the suborder Hexagrammoidei and related taxa (Pisces: Scorpaeniformes). Memoirs of the Faculty of Fisheries, Hokkaido University 41, 1-97
    • (1994) Memoirs of the Faculty of Fisheries , vol.41 , pp. 1-97
    • Shinohara, G.1
  • 50
    • 0036368055 scopus 로고    scopus 로고
    • A test of mitochondrial gene-based phylogeny of woodpeckers (Genus Picoides) using an independent nuclear gene, B fibrinogen intron 7
    • Weibel A.C, Moore W.S. A test of mitochondrial gene-based phylogeny of woodpeckers (Genus Picoides) using an independent nuclear gene, B fibrinogen intron 7. Molecular Phylogenetics and Evolution. 22:2002;247-257
    • (2002) Molecular Phylogenetics and Evolution , vol.22 , pp. 247-257
    • Weibel, A.C.1    Moore, W.S.2
  • 51
    • 0032226105 scopus 로고    scopus 로고
    • Combining data sets with different phylogenetic histories
    • Wiens J.J. Combining data sets with different phylogenetic histories. Systematic Biology. 47:1998;568-581
    • (1998) Systematic Biology , vol.47 , pp. 568-581
    • Wiens, J.J.1
  • 52
    • 0030858262 scopus 로고    scopus 로고
    • Morphology and development of the multiple lateral line canals on the trunk in two species of Hexagrammos (Scorpaeniformes, Hexagrammidae)
    • Wonsettler A.L, Webb J.F. Morphology and development of the multiple lateral line canals on the trunk in two species of Hexagrammos (Scorpaeniformes, Hexagrammidae). Journal of Morphology. 233:1997;195-214
    • (1997) Journal of Morphology , vol.233 , pp. 195-214
    • Wonsettler, A.L.1    Webb, J.F.2
  • 53
    • 0029834015 scopus 로고    scopus 로고
    • Phylogenetic performance of mitochondrial protein-coding genes in resolving relationships among vertebrates
    • Zardoya R, Meyer A. Phylogenetic performance of mitochondrial protein-coding genes in resolving relationships among vertebrates. Molecular Biology and Evolution. 13:1996;933-942
    • (1996) Molecular Biology and Evolution , vol.13 , pp. 933-942
    • Zardoya, R.1    Meyer, A.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.