메뉴 건너뛰기




Volumn 32, Issue 4, 2007, Pages 762-771

The genus Machaerium (Leguminosae) is more closely related to Aeschynomene sect. Ochopodium than to Dalbergia: Inferences from combined sequence data

Author keywords

Dalbergioid legumes; ITS 5.8S region; Phylogeny; trnL intron

Indexed keywords

AESCHYNOMENE (ANGIOSPERM); DALBERGIA; FABACEAE; MACHAERIUM; SOEMMERINGIA;

EID: 38349177909     PISSN: 03636445     EISSN: 15482324     Source Type: Journal    
DOI: 10.1600/036364407783390700     Document Type: Article
Times cited : (41)

References (54)
  • 3
    • 0346339515 scopus 로고
    • Contribuição ao estudo de algumas especies do genero Machaerium Persoon (Leguminosae- Papilionoideae), ocorrentes na Amazônia brasileira
    • BASTOS, M. N. C. 1987. Contribuição ao estudo de algumas especies do genero Machaerium Persoon (Leguminosae- Papilionoideae), ocorrentes na Amazônia brasileira. Boletín do Museo Paraense Historia Naturelle 3: 183-278.
    • (1987) Boletín do Museo Paraense Historia Naturelle , vol.3 , pp. 183-278
    • BASTOS, M.N.C.1
  • 4
    • 0003095194 scopus 로고
    • Synopsis of Dalbergieae a tribe of Leguminosae
    • BENTHAM, G. 1860. Synopsis of Dalbergieae a tribe of Leguminosae. Journal of the Linnean Society Botany 4: 1-128.
    • (1860) Journal of the Linnean Society Botany , vol.4 , pp. 1-128
    • BENTHAM, G.1
  • 5
    • 0000871771 scopus 로고    scopus 로고
    • Monograph of Pictetia (Leguminosae-Papilionoideae) and review of the Aeschynomeneae
    • BEYRA-M, A. and M. LAVIN. 1999. Monograph of Pictetia (Leguminosae-Papilionoideae) and review of the Aeschynomeneae. Systematic Botany Monographs 56: 1-93.
    • (1999) Systematic Botany Monographs , vol.56 , pp. 1-93
    • BEYRA-M, A.1    LAVIN, M.2
  • 6
    • 38349101434 scopus 로고
    • Systematic studies of the genus Dalbergia
    • Ph.D. Thesis. Reading, England: University of Reading
    • CARVALHO, A. M DE 1989. Systematic studies of the genus Dalbergia L.f. in Brazil. Ph.D. Thesis. Reading, England: University of Reading.
    • (1989) L.f. in Brazil
    • CARVALHO, A.1    DE, M.2
  • 7
    • 0030907092 scopus 로고    scopus 로고
    • A synopsis of the genus Dalbergia (Fabaceae: Dalbergieae) in Brazil
    • _. 1997. A synopsis of the genus Dalbergia (Fabaceae: Dalbergieae) in Brazil. Brittonia 49: 87-109.
    • (1997) Brittonia , vol.49 , pp. 87-109
    • CARVALHO, A.1    DE, M.2
  • 8
    • 0032707957 scopus 로고    scopus 로고
    • Phylogenetic analysis of the cultivated and wild species of Phaseolus (Fabaceae)
    • DELGADO-SALINAS, A., T. TURLEY, A. RICHMAN, and M. LAVIN. 1999. Phylogenetic analysis of the cultivated and wild species of Phaseolus (Fabaceae). Systematic Botany 23: 438-460.
    • (1999) Systematic Botany , vol.23 , pp. 438-460
    • DELGADO-SALINAS, A.1    TURLEY, T.2    RICHMAN, A.3    LAVIN, M.4
  • 9
    • 0000479431 scopus 로고
    • Isolation of plant DNA from fresh tissue
    • DOYLE, J. J. and J. L. DOYLE. 1987. Isolation of plant DNA from fresh tissue. Focus 12: 13-15.
    • (1987) Focus , vol.12 , pp. 13-15
    • DOYLE, J.J.1    DOYLE, J.L.2
  • 12
    • 0031978181 scopus 로고    scopus 로고
    • Basecalling of automated sequencer traces using Phred II: Error probabilities
    • EWING, B. and P. GREEN. 1998. Basecalling of automated sequencer traces using Phred II: error probabilities. Genome Research 8: 186-194.
    • (1998) Genome Research , vol.8 , pp. 186-194
    • EWING, B.1    GREEN, P.2
  • 13
    • 0031955518 scopus 로고    scopus 로고
    • Basecalling of automated sequencer traces using Phred I: Accuracy assessment
    • _, L. HILLIER, M. WENDI, and P. GREEN. 1998. Basecalling of automated sequencer traces using Phred I: accuracy assessment. Genome Research 8: 175-185.
    • (1998) Genome Research , vol.8 , pp. 175-185
    • EWING, B.1    GREEN, P.2    HILLIER, L.3    WENDI, M.4    GREEN, P.5
  • 14
    • 0000569073 scopus 로고
    • The retention index and homoplasy excess
    • FARRIS, J. S. 1989. The retention index and homoplasy excess. Systematic Zoology 38: 406-407.
    • (1989) Systematic Zoology , vol.38 , pp. 406-407
    • FARRIS, J.S.1
  • 16
    • 0002420167 scopus 로고    scopus 로고
    • Betaine and DMSO: Enhancing Agents for PCR
    • FRACKMAN, S., G. KOBS, D. SIMPSON, and D. STORTS. 1998. Betaine and DMSO: Enhancing Agents for PCR. Promega Notes 65: 27, www.promega.com/pnotes/65/6921_27/default.html.
    • (1998) Promega Notes , vol.65 , pp. 27
    • FRACKMAN, S.1    KOBS, G.2    SIMPSON, D.3    STORTS, D.4
  • 17
    • 0036918284 scopus 로고    scopus 로고
    • Phylogenetic analysis of a polyphyletic African genus of Caesalpinioideae (Leguminosae): Monopetalanthus Harms
    • GERVAIS, G. Y. F. and A. BRUNEAU. 2002. Phylogenetic analysis of a polyphyletic African genus of Caesalpinioideae (Leguminosae): Monopetalanthus Harms. Plant Systematics and Evolution 235: 19-34.
    • (2002) Plant Systematics and Evolution , vol.235 , pp. 19-34
    • GERVAIS, G.Y.F.1    BRUNEAU, A.2
  • 18
    • 0031955116 scopus 로고    scopus 로고
    • Consed: A graphical tool for sequence finishing
    • GORDON, D., C. ABAJIAN, and P. GREEN. 1998. Consed: A graphical tool for sequence finishing. Genome Research 8: 195-202.
    • (1998) Genome Research , vol.8 , pp. 195-202
    • GORDON, D.1    ABAJIAN, C.2    GREEN, P.3
  • 20
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • HIGGINS, D., J. THOMPSON, T. GIBSON, J. D. THOMPSON, D. G. HIGGINS, and T. J. GIBSON. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Research 22: 4673-4680.
    • (1994) Nucleic Acids Research , vol.22 , pp. 4673-4680
    • HIGGINS, D.1    THOMPSON, J.2    GIBSON, T.3    THOMPSON, J.D.4    HIGGINS, D.G.5    GIBSON, T.J.6
  • 21
    • 0004449745 scopus 로고
    • Leguminosas-Papilionadas: Gêneros Machaerium e Paramachaerium
    • São Paulo: Instituto de Botânica
    • HOEHNE, F. C. 1941. Leguminosas-Papilionadas: Gêneros Machaerium e Paramachaerium. Flora Brasílica, Fascículo 3 (25). São Paulo: Instituto de Botânica.
    • (1941) Flora Brasílica, Fascículo , vol.3 , Issue.25
    • HOEHNE, F.C.1
  • 22
    • 0034849408 scopus 로고    scopus 로고
    • MrBayes: Bayesian inference of phylogeny
    • HUELSENBECK, J. P. and F. RONQUIST. 2001. MrBayes: Bayesian inference of phylogeny. Bioinformatics 17: 754-755.
    • (2001) Bioinformatics , vol.17 , pp. 754-755
    • HUELSENBECK, J.P.1    RONQUIST, F.2
  • 23
    • 0028896908 scopus 로고
    • Plant DNA isolation: A method to efficiently remove polyphenolics, polysaccharides, and RNA
    • JOBES, D. V., D. L. HURLEY, and L. B. THIEN. 1995. Plant DNA isolation: a method to efficiently remove polyphenolics, polysaccharides, and RNA. Taxon 44: 349-386.
    • (1995) Taxon , vol.44 , pp. 349-386
    • JOBES, D.V.1    HURLEY, D.L.2    THIEN, L.B.3
  • 24
    • 21344439089 scopus 로고    scopus 로고
    • Systematics and biogeography of Lathyrus (Leguminosae) based on internal transcribed spacer and cpDNA sequence data
    • KENICER, G. J., T. KAJITA, R. T. PENNINGTON, and J. MURATA. 2005. Systematics and biogeography of Lathyrus (Leguminosae) based on internal transcribed spacer and cpDNA sequence data. American Journal of Botany 92: 1199-1209.
    • (2005) American Journal of Botany , vol.92 , pp. 1199-1209
    • KENICER, G.J.1    KAJITA, T.2    PENNINGTON, R.T.3    MURATA, J.4
  • 25
    • 38349186725 scopus 로고    scopus 로고
    • KLITGAARD, B. B. and M. LAVIN. 2005. Dalbergieae. Pp. 306-335 in Legumes of the World, eds. G. P. Lewis, B. D. Schrire, B. A. Mackinder, and J. M. Lock. Kew: Royal Botanic Gardens.
    • KLITGAARD, B. B. and M. LAVIN. 2005. Dalbergieae. Pp. 306-335 in Legumes of the World, eds. G. P. Lewis, B. D. Schrire, B. A. Mackinder, and J. M. Lock. Kew: Royal Botanic Gardens.
  • 26
    • 84963036271 scopus 로고
    • Quantitative phyletics and the evolution of anurans
    • KLUGE, A. G. and J. S. FARRIS. 1969. Quantitative phyletics and the evolution of anurans. Systematic Zoology 18: 1-32.
    • (1969) Systematic Zoology , vol.18 , pp. 1-32
    • KLUGE, A.G.1    FARRIS, J.S.2
  • 27
    • 3242810318 scopus 로고    scopus 로고
    • MEGA3: Integrated Software for Molecular Evolutionary Genetics Analysis and Sequence Alignment
    • KUMAR, S., K. TAMURA, and M. NEI. 2004. MEGA3: Integrated Software for Molecular Evolutionary Genetics Analysis and Sequence Alignment. Briefings in Bioinformatics 5: 150-163.
    • (2004) Briefings in Bioinformatics , vol.5 , pp. 150-163
    • KUMAR, S.1    TAMURA, K.2    NEI, M.3
  • 28
    • 38349162956 scopus 로고    scopus 로고
    • LAVIN, M. 1987. A cladistic analysis of the tribe Robinieae (Leguminosae; Papilionoideae). Pp. 31-64 in Advances in Legume Systematics, Part 3, ed. C. H. Stirton. Kew: Royal Botanic Gardens.
    • LAVIN, M. 1987. A cladistic analysis of the tribe Robinieae (Leguminosae; Papilionoideae). Pp. 31-64 in Advances in Legume Systematics, Part 3, ed. C. H. Stirton. Kew: Royal Botanic Gardens.
  • 29
    • 25144446148 scopus 로고    scopus 로고
    • Evolutionary rates analysis of Leguminosae implicates a rapid diversification of lineages during the Tertiary
    • _, P. HERENDEEN, and M. F. WOJCIECHOWSKI. 2005. Evolutionary rates analysis of Leguminosae implicates a rapid diversification of lineages during the Tertiary. Systematic Biology 54: 530-549.
    • (2005) Systematic Biology , vol.54 , pp. 530-549
    • KUMAR, S.1    TAMURA, K.2    NEI, M.3    HERENDEEN, P.4    WOJCIECHOWSKI, M.F.5
  • 32
    • 0003168521 scopus 로고
    • Tribo Dalbergieae (Leguminosae Papilionoideae) - morfologia do frutos, sementes e plântulas e sua aplicação na sistemática
    • LIMA, H. C. DE 1990. Tribo Dalbergieae (Leguminosae Papilionoideae) - morfologia do frutos, sementes e plântulas e sua aplicação na sistemática. Arquivos do Jardim Botânico do Rio de Janeiro 30: 1-42.
    • (1990) Arquivos do Jardim Botânico do Rio de Janeiro , vol.30 , pp. 1-42
    • LIMA, H.1    DE, C.2
  • 35
    • 0036330926 scopus 로고    scopus 로고
    • The phylogeny of Lens (Leguminosae): New insight from ITS sequence analysis
    • MAYER, M. S. and S. K. BAGGA. 2002. The phylogeny of Lens (Leguminosae): new insight from ITS sequence analysis. Plant Systematics and Evolution 232: 145-154.
    • (2002) Plant Systematics and Evolution , vol.232 , pp. 145-154
    • MAYER, M.S.1    BAGGA, S.K.2
  • 38
    • 38349145707 scopus 로고    scopus 로고
    • PENNINGTON, R. T., B. B. KLITGAARD, H. IRELAND, and M. LAVIN. 2000. New insights into floral evolution of basal Papilionoideae from molecular phylogenies. Pp. 233-248 in Advances in Legume Systematics, part 9, eds. P. S. Herendeen and A. Bruneau. Kew: Royal Botanic Gardens.
    • PENNINGTON, R. T., B. B. KLITGAARD, H. IRELAND, and M. LAVIN. 2000. New insights into floral evolution of basal Papilionoideae from molecular phylogenies. Pp. 233-248 in Advances in Legume Systematics, part 9, eds. P. S. Herendeen and A. Bruneau. Kew: Royal Botanic Gardens.
  • 39
    • 38349171899 scopus 로고    scopus 로고
    • POLHILL, R. M. 1981. Dalbergieae. Pp. 233-242 in Advances in Legume Systematics, part 1, eds. R. M. Polhill and P. H. Raven. Kew: Royal Botanic Gardens.
    • POLHILL, R. M. 1981. Dalbergieae. Pp. 233-242 in Advances in Legume Systematics, part 1, eds. R. M. Polhill and P. H. Raven. Kew: Royal Botanic Gardens.
  • 40
    • 0000317432 scopus 로고
    • Classification of the Leguminosae
    • Pp, eds. F. A. Bisby, J. Buckingham, and J. B. Harborne. London: Chapman and Hall
    • _. 1994. Classification of the Leguminosae. Pp. 35-48 in Phytochemical dictionary of the Leguminosae, vol. 1, eds. F. A. Bisby, J. Buckingham, and J. B. Harborne. London: Chapman and Hall.
    • (1994) Phytochemical dictionary of the Leguminosae , vol.1 , pp. 35-48
    • OLIVEIRA, A.1    GOTTLIEB, O.2
  • 42
    • 0031773680 scopus 로고    scopus 로고
    • ModelTest: Testing the model of DNA substitution
    • POSADA, D. and K. A. CRANDALL. 1998. ModelTest: testing the model of DNA substitution. Bioinformatics 14: 817-818.
    • (1998) Bioinformatics , vol.14 , pp. 817-818
    • POSADA, D.1    CRANDALL, K.A.2
  • 43
    • 0004730088 scopus 로고
    • The species of Dalbergia of southeastern Asia
    • PRAIN, D. 1904. The species of Dalbergia of southeastern Asia. Annals of the Royal Botanical Gardens 10: 1-114.
    • (1904) Annals of the Royal Botanical Gardens , vol.10 , pp. 1-114
    • PRAIN, D.1
  • 44
    • 34248334281 scopus 로고    scopus 로고
    • Comparative analysis of different DNA extraction protocols in fresh and herbarium specimens of genus Dalbergia
    • RIBEIRO, R. A. and M. B. LOVATO. 2007. Comparative analysis of different DNA extraction protocols in fresh and herbarium specimens of genus Dalbergia. Genetics and Molecular Research 6: 173-187.
    • (2007) Genetics and Molecular Research , vol.6 , pp. 173-187
    • RIBEIRO, R.A.1    LOVATO, M.B.2
  • 45
    • 0003377513 scopus 로고
    • The American species of Aeschynomene. Contributions of the United States National Herbarium
    • RUDD, V. E. 1955. The American species of Aeschynomene. Contributions of the United States National Herbarium 32: 1-172.
    • (1955) , vol.32 , pp. 1-172
    • RUDD, V.E.1
  • 47
    • 38349167054 scopus 로고    scopus 로고
    • _. 1981. Aeschynomeneae. Pp. 347-354 Advances in legume systematics, part 1, eds. R. M. Polhill and P. H. Raven. Kew: Royal Botanic Gardens.
    • _. 1981. Aeschynomeneae. Pp. 347-354 Advances in legume systematics, part 1, eds. R. M. Polhill and P. H. Raven. Kew: Royal Botanic Gardens.
  • 48
    • 58149258649 scopus 로고
    • Studies in Machaerium (Leguminosae) V
    • _. 1987. Studies in Machaerium (Leguminosae) V. Phytologia 62: 277-281.
    • (1987) Phytologia , vol.62 , pp. 277-281
    • RUDD, V.E.1
  • 49
    • 38349110623 scopus 로고    scopus 로고
    • As espécies de Machaerium Pers. (Leguminosae - Papilionoideae) ocorrentes no estado de São Paulo
    • SARTORI, A. L. B. and A. M. G. A. TOZZI. 1998. As espécies de Machaerium Pers. (Leguminosae - Papilionoideae) ocorrentes no estado de São Paulo. Revista Brasileira de Botânica 21: 211-246.
    • (1998) Revista Brasileira de Botânica , vol.21 , pp. 211-246
    • SARTORI, A.L.B.1    TOZZI, A.M.G.A.2
  • 50
    • 0034350427 scopus 로고    scopus 로고
    • Gaps as characters in sequence-based phylogenetic analyses
    • SIMMONS, M. P. and H. OCHOTERENA. 2000. Gaps as characters in sequence-based phylogenetic analyses. Systematic Biology 49: 369-381.
    • (2000) Systematic Biology , vol.49 , pp. 369-381
    • SIMMONS, M.P.1    OCHOTERENA, H.2
  • 51
    • 38349174547 scopus 로고    scopus 로고
    • SWOFFORD, D. L. 2000. PAUP*: phylogenetic analysis using parsimony *and other methods, version 4.0b4a. Sunderland, Massachusetts, USA: Sinauer Associates
    • SWOFFORD, D. L. 2000. PAUP*: phylogenetic analysis using parsimony (*and other methods), version 4.0b4a. Sunderland, Massachusetts, USA: Sinauer Associates.
  • 52
    • 0026261665 scopus 로고
    • Universal primers for amplification of three non-coding regions of chloroplast DNA
    • TABERLET, P., L. GIELLY, G. PAUTOU, and J. BOUVET. 1991. Universal primers for amplification of three non-coding regions of chloroplast DNA. Plant Molecular Biology 17: 1105-1109.
    • (1991) Plant Molecular Biology , vol.17 , pp. 1105-1109
    • TABERLET, P.1    GIELLY, L.2    PAUTOU, G.3    BOUVET, J.4
  • 53
    • 0002380791 scopus 로고
    • Leguminosae
    • Pp, eds. H. G. A. Engler and K. A. E. Prantl. Leipzig: Wilhelm Engelman
    • TAUBERT, P. 1891. Leguminosae. Pp. 333-338 in Die natürlichen Pflanzenfamilien, vol 3, eds. H. G. A. Engler and K. A. E. Prantl. Leipzig: Wilhelm Engelman.
    • (1891) Die natürlichen Pflanzenfamilien , vol.3 , pp. 333-338
    • TAUBERT, P.1
  • 54
    • 38349131160 scopus 로고    scopus 로고
    • VERDCOURT, B. 1971. Aeschynomene. Pp. 364-406 in Flora of Tropical East Africa, Leguminosae, Papilionoideae, eds. J. B. Gillett, R. M. Polhill, and B. Verdcourt. Kew: Royal Botanic Gardens.
    • VERDCOURT, B. 1971. Aeschynomene. Pp. 364-406 in Flora of Tropical East Africa, Leguminosae, Papilionoideae, eds. J. B. Gillett, R. M. Polhill, and B. Verdcourt. Kew: Royal Botanic Gardens.


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.