-
1
-
-
0032723027
-
A search for the origins of animals and fungi: Comparing and combining molecular data
-
Baldauf SL. 1999. A search for the origins of animals and fungi: comparing and combining molecular data. Am Nat. 154:S178-S188.
-
(1999)
Am Nat
, vol.154
-
-
Baldauf, S.L.1
-
2
-
-
0037022379
-
-
Bapteste E, Brinkmann H, Lee JA, et al. (11 co-authors). 2002. The analysis of 100 genes supports the grouping of three highly divergent amoebae: Dictyostelium, Entamoeba, and Mastigamoeba. Proc Natl Acad Sci USA. 99(3):1414-1419.
-
Bapteste E, Brinkmann H, Lee JA, et al. (11 co-authors). 2002. The analysis of 100 genes supports the grouping of three highly divergent amoebae: Dictyostelium, Entamoeba, and Mastigamoeba. Proc Natl Acad Sci USA. 99(3):1414-1419.
-
-
-
-
3
-
-
0033015732
-
Archaea sister group of bacteria? Indications from tree reconstruction artifacts in ancient phylogenies
-
Brinkmann H, Philippe H. 1999. Archaea sister group of bacteria? Indications from tree reconstruction artifacts in ancient phylogenies. Mol Biol Evol. 16(6):817-825.
-
(1999)
Mol Biol Evol
, vol.16
, Issue.6
, pp. 817-825
-
-
Brinkmann, H.1
Philippe, H.2
-
4
-
-
23044494638
-
An emerging phylogenetic core of Archaea: Phylogenies of transcription and translation machineries converge following addition of new genome sequences
-
Brochier C, Forterre P, Gribaldo S. 2005. An emerging phylogenetic core of Archaea: phylogenies of transcription and translation machineries converge following addition of new genome sequences. BMC Evol Biol. 5(1):36.
-
(2005)
BMC Evol Biol
, vol.5
, Issue.1
, pp. 36
-
-
Brochier, C.1
Forterre, P.2
Gribaldo, S.3
-
5
-
-
0037118037
-
Phylogeny: A non-hyperthermophilic ancestor for bacteria
-
Brochier C, Philippe H. 2002. Phylogeny: a non-hyperthermophilic ancestor for bacteria. Nature. 417(6886):244.
-
(2002)
Nature
, vol.417
, Issue.6886
, pp. 244
-
-
Brochier, C.1
Philippe, H.2
-
7
-
-
33846349924
-
Rooting the tree of life by transition analyses
-
Cavalier-Smith T. 2006. Rooting the tree of life by transition analyses. Biol Direct. 1(1):19.
-
(2006)
Biol Direct
, vol.1
, Issue.1
, pp. 19
-
-
Cavalier-Smith, T.1
-
8
-
-
10944248427
-
Computing prokaryotic gene ubiquity: Rescuing the core from extinction
-
Charlebois RL, Doolittle WF. 2004. Computing prokaryotic gene ubiquity: rescuing the core from extinction. Genome Res. 14(12):2469-2477.
-
(2004)
Genome Res
, vol.14
, Issue.12
, pp. 2469-2477
-
-
Charlebois, R.L.1
Doolittle, W.F.2
-
9
-
-
33644700003
-
Toward automatic reconstruction of a highly resolved tree of life
-
Ciccarelli FD, Doerks T, von Mering C, Creevey CJ, Snel B, Bork P. 2006. Toward automatic reconstruction of a highly resolved tree of life. Science. 311(5765):1283-1287.
-
(2006)
Science
, vol.311
, Issue.5765
, pp. 1283-1287
-
-
Ciccarelli, F.D.1
Doerks, T.2
von Mering, C.3
Creevey, C.J.4
Snel, B.5
Bork, P.6
-
10
-
-
33750810896
-
The tree of one percent
-
Dagan T, Martin W. 2006. The tree of one percent. Genome Biol. 7:118.
-
(2006)
Genome Biol
, vol.7
, pp. 118
-
-
Dagan, T.1
Martin, W.2
-
11
-
-
33847790997
-
Pattern pluralism and the Tree of Life hypothesis
-
Doolittle WF, Bapteste E. 2007. Pattern pluralism and the Tree of Life hypothesis. Proc Natl Acad Sci USA. 104(7):2043-2049.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, Issue.7
, pp. 2043-2049
-
-
Doolittle, W.F.1
Bapteste, E.2
-
12
-
-
0036124759
-
Re-examining alveolate evolution using multiple protein molecular phylogenies
-
Fast NM, Xue L, Bingham S, Keeling PJ. 2002. Re-examining alveolate evolution using multiple protein molecular phylogenies. J Eukaryot Microbiol. 49(1):30-37.
-
(2002)
J Eukaryot Microbiol
, vol.49
, Issue.1
, pp. 30-37
-
-
Fast, N.M.1
Xue, L.2
Bingham, S.3
Keeling, P.J.4
-
13
-
-
0242578620
-
A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
-
Guindon S, Gascuel O. 2003. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol. 52(5):696-704.
-
(2003)
Syst Biol
, vol.52
, Issue.5
, pp. 696-704
-
-
Guindon, S.1
Gascuel, O.2
-
14
-
-
33645816587
-
Assessment ofmethods for amino acid matrix selection and their use on empirical data shows that ad hoc assumptions for choice of matrix are not justified
-
Keane TM, Creevey CJ, Pentony MM, Naughton TJ, McInerney JO. 2006. Assessment ofmethods for amino acid matrix selection and their use on empirical data shows that ad hoc assumptions for choice of matrix are not justified. BMC Evol Biol. 6:29.
-
(2006)
BMC Evol Biol
, vol.6
, pp. 29
-
-
Keane, T.M.1
Creevey, C.J.2
Pentony, M.M.3
Naughton, T.J.4
McInerney, J.O.5
-
16
-
-
1342271382
-
From gene trees to organismal phylogeny in prokaryotes: The case of the gamma-Proteobacteria
-
Lerat E, Daubin V, Moran NA. 2003. From gene trees to organismal phylogeny in prokaryotes: the case of the gamma-Proteobacteria. PLoS Biol. 1(1):E19.
-
(2003)
PLoS Biol
, vol.1
, Issue.1
-
-
Lerat, E.1
Daubin, V.2
Moran, N.A.3
-
17
-
-
3042550872
-
Genome-scale phylogeny and the detection of systematic biases
-
Phillips MJ, Delsuc F, Penny D. 2004. Genome-scale phylogeny and the detection of systematic biases. Mol Biol Evol. 21(7):1455-1458.
-
(2004)
Mol Biol Evol
, vol.21
, Issue.7
, pp. 1455-1458
-
-
Phillips, M.J.1
Delsuc, F.2
Penny, D.3
-
18
-
-
0036623258
-
An approximately unbiased test of phylogenetic tree selection
-
Shimodaira H. 2002. An approximately unbiased test of phylogenetic tree selection. Syst Biol. 51(3):492-508.
-
(2002)
Syst Biol
, vol.51
, Issue.3
, pp. 492-508
-
-
Shimodaira, H.1
-
19
-
-
0036139287
-
CONSEL: For assessing the confidence of phylogenetic tree selection
-
Shimodaira H, Hasegawa M. 2001. CONSEL: for assessing the confidence of phylogenetic tree selection. Bioinformatics. 17(12):1246-1247.
-
(2001)
Bioinformatics
, vol.17
, Issue.12
, pp. 1246-1247
-
-
Shimodaira, H.1
Hasegawa, M.2
-
20
-
-
3242801484
-
IQPNNI: Moving fast through tree space and stopping in time
-
Vinh le S, Von Haeseler A. 2004. IQPNNI: moving fast through tree space and stopping in time. Mol Biol Evol. 21(8): 1565-1571.
-
(2004)
Mol Biol Evol
, vol.21
, Issue.8
, pp. 1565-1571
-
-
Vinh le, S.1
Von Haeseler, A.2
|