Phylogenetic position of Oxygyne shinzatoi (Burmanniaceae) inferred from 18S rDNA sequences (Journal of Plant Research (2008) 121, (27-32) DOI: 10.1007/s10265-007-0136-6);Phylogenetic position of Oxygyne shinzatoi (Burmanniaceae) inferred from 18S rDNA sequences

Journal of Plant Research

Volumn 121, Issue 1, 2008, Pages 27-32

  Yokoyama, Jun ^a   Koizumi, Yayoi ^b   Yokota, Masatsugu ^c   Tsukaya, Hirokazu ^d,e  

^a YAMAGATA UNIVERSITY   (Japan)

^b TOHOKU UNIVERSITY   (Japan)

^c UNIVERSITY OF THE RYUKYUS   (Japan)

^d UNIVERSITY OF TOKYO   (Japan)

^e NATIONAL INSTITUTE FOR BASIC BIOLOGY   (Japan)

Author keywords

Burmanniaceae; Molecular phylogeny; Oxygyne; RDNA; Thismieae

Indexed keywords

BURMANNIACEAE;

EID: 37849019845     PISSN: 09189440     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10265-008-0175-7     Document Type: Erratum

References (25)

1. Abe C, Akasawa Y (1989) A new species of Oxygyne (Burmanniaceae) found in Shikoku, Japan. J Jpn Bot 64:161-164
2. Bousalem M, Arnau G, Houch I, Arnolin R, Viader V, Santoni S, David J (2006) Microsatellite segregation analysis and cytogenetic evidence for tetrasomic inheritance in the American yam Dioscorea trifida and a new basic chromosome number in the Dioscoreae. Theor Appl Genet 113:439-451
3. Caddick LR, Rudall PJ, Wilkin P, Hedderson AJ, Chase MW (2002) Phylogenetics of Dioscoreales based on combined analyses of morphological and molecular data. Bot J Linn Soc 138:123-144
4. Chatterjee A, Ghosh S, Roy SC (1989) A cytological survey of eastern Himalayan plants III. Cell Chromosome Res 12:22-29
5. Chin H, Chang M, Ling P, Ting C, Dou F (1985) A cytological study on Chinese Dioscorea L. - the chromosome numbers and their relation to the origin and evolution of the genus. Acta Phytotax Sin 23:11-18
6. Essad S (1984) Variation géographique des nombres chromosomiques de base et polyploïdie dans le genre Dioscorea a propos du dénombrement des espèces transversa Brown, pilosiuscula Bert et trifida. Agronomie 4:611-617
7. Felsenstein J (1985) Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783-791
8. Hatusima S (1976) Two new species of Burmanniaceae from Japan. J Geobot 24:2-6
9. Huelsenbeck JP, Ronquist F (2001) MRBAYES. Bayesian inference of phylogeny. Bioinformatics 17:754-755
10. Imhof S (1999) Anatomy and mycotrophy of the achlorophyllous Afrothismia winkleri. New Phytol 144:533-540
11. Kubitzki K (1998) Taccaceae. In: Kubitzki K (ed) The families and genera of vascular plants. III. Flowering plants. Monocotyledons. Lilianae (except Orchidaceae). Springer, Berlin, pp 425-428
12. Maas-van de Kamer H (1998) Burmanniaceae. In: Kubitzki K (ed) The families and genera of vascular plants. III. Flowering plants. Monocotyledons. Lilianae (except Orchidaceae). Springer, Berlin, pp 154-164
13. Maddison WP (1991) The discovery and importance of multiple islands of most-parsimonious trees. Syst Zool 40:315-328
14. Merckx V, Schols P, Maas-van de Kamer H, Maas P, Huysmans S, Smets E (2006) Phylogeny and evolution of Burmanniaceae (Dioscoreales) based on nuclear and mitochondrial data. Am J Bot 93:1684-1698
15. Nickrent DL, Duff RJ, Colwell AE, Wolfe AD, Young ND, Steiner KE, Depamphilis CW (1998) Molecular phylogenetic and evolutionary studies of parasitic plants. In: Soltis DE, Soltis PS, Doyle JJ (eds) Molecular systematics of plants II, DNA sequencing. Kluwer, New York, pp 211-241
16. Posada D, Crandall KA (1998) MODELTEST: testing the model of DNA substitution. Bioinformatics 14:817-818
17. Ronquist F, Huelsenbeck JP (2003) MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19:1572-1574
18. Schlechter R (1906) Burmanniaceae africanae. Bot Jahrb Syst 37:140-141
19. Segarra-Moragues JG, Catalán P (2003) Life history variation between species of the relictual genus Borderea (Dioscoreaceae): phylogeography, genetic diversity, and population genetic structure assessed by RAPD markers. Biol J Linn Soc 80:483-498
20. Swofford DL (1998) PAUP*. Phylogenetic analysis using parsimony (*and other methods). Version 4. Sinauer, Sunderland
21. Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997) The ClustalX Windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 24:4876-4882
22. Tsukaya H, Yokota M, Okada H (2007) Chromosomal characteristics of Oxygyne shinzatoi (Hatus.) C. Abe et Akasawa (Burmanniaceae), and its phylogenetic significance. Acta Phytotax Geobot 58:100-106
23. White TJ, Bruns TD, Lee S, Taylor J (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis M et al. (eds) PCR protocols: a guide to methods and applications. Academic, San Diego, pp 315-322
24. Wilcox TP, Garcia de Leon FJ, Hendrickson DA, Hillis DM (2004) Convergence among cave catfishes: long-branch attraction and a Bayesian relative rates test. Mol Phylogenet Evol 31:1101-1113
25. Woodward CL, Berry PE, Maas-van de Kamer H, Swing K (2007) Tiputinia foetida, a new mycoheterotrophic genus of Thismiaceae from Amazonian Ecuador, and a likely case of deceit pollination. Taxon 56:157-162