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Volumn 189, Issue 24, 2007, Pages 9037-9043

TrwC-mediated site-specific recombination is controlled by host factors altering local DNA topology

Author keywords

[No Author keywords available]

Indexed keywords

DNA; INTEGRATION HOST FACTOR; PROTEIN; SINGLE STRANDED DNA; TRWA PROTEIN; TWRC PROTEIN; UNCLASSIFIED DRUG;

EID: 37449007751     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/JB.01152-07     Document Type: Article
Times cited : (10)

References (32)
  • 1
    • 0025336625 scopus 로고
    • Structure of Arc repressor in solution: Evidence for a family of beta-sheet DNA-binding proteins
    • Breg, J. N., J. H. van Opheusden, M. J. Burgering, R. Boelens, and R. Kaptein. 1990. Structure of Arc repressor in solution: evidence for a family of beta-sheet DNA-binding proteins. Nature 346:586-589.
    • (1990) Nature , vol.346 , pp. 586-589
    • Breg, J.N.1    van Opheusden, J.H.2    Burgering, M.J.3    Boelens, R.4    Kaptein, R.5
  • 3
    • 0024652297 scopus 로고
    • Transcriptional occlusion of transposon targets
    • Casadesus, J., and J. R. Roth. 1989. Transcriptional occlusion of transposon targets. Mol. Gen. Genet. 216:204-209.
    • (1989) Mol. Gen. Genet , vol.216 , pp. 204-209
    • Casadesus, J.1    Roth, J.R.2
  • 4
    • 33750485033 scopus 로고    scopus 로고
    • A new domain of conjugative relaxase TrwC responsible for efficient orcT-specific recombination on minimal target sequences
    • César, C. E., C. Machón, F. de la Cruz, and M. Llosa. 2006. A new domain of conjugative relaxase TrwC responsible for efficient orcT-specific recombination on minimal target sequences. Mol. Microbiol. 62:984-996.
    • (2006) Mol. Microbiol , vol.62 , pp. 984-996
    • César, C.E.1    Machón, C.2    de la Cruz, F.3    Llosa, M.4
  • 5
    • 0034612342 scopus 로고    scopus 로고
    • One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products
    • Datsenko, K. A., and B. L. Wanner. 2000. One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. Proc. Natl. Acad. Sci. USA 97:6640-6645.
    • (2000) Proc. Natl. Acad. Sci. USA , vol.97 , pp. 6640-6645
    • Datsenko, K.A.1    Wanner, B.L.2
  • 6
    • 0015402376 scopus 로고
    • Trimethoprim resistance conferred by W plasmids in Enterobacteriaceae
    • Datta, N., and R. W. Hedges. 1972. Trimethoprim resistance conferred by W plasmids in Enterobacteriaceae. J. Gen. Microbiol. 72:349-355.
    • (1972) J. Gen. Microbiol , vol.72 , pp. 349-355
    • Datta, N.1    Hedges, R.W.2
  • 7
    • 0034075263 scopus 로고    scopus 로고
    • Target site selection by Tn7: AttTn7 transcription and target activity
    • DeBoy, R. T., and N. L. Craig. 2000. Target site selection by Tn7: attTn7 transcription and target activity. J. Bacteriol. 182:3310-3313.
    • (2000) J. Bacteriol , vol.182 , pp. 3310-3313
    • DeBoy, R.T.1    Craig, N.L.2
  • 8
    • 0025195680 scopus 로고
    • Mini-Tn5 transposon derivatives for insertion mutagenesis, promoter probing, and chromosomal insertion of cloned DNA in gram-negative eubacteria
    • de Lorenzo, V., M. Herrero, U. Jakubzik, and K. N. Timmis. 1990. Mini-Tn5 transposon derivatives for insertion mutagenesis, promoter probing, and chromosomal insertion of cloned DNA in gram-negative eubacteria. J. Bacteriol. 172:6568-6572.
    • (1990) J. Bacteriol , vol.172 , pp. 6568-6572
    • de Lorenzo, V.1    Herrero, M.2    Jakubzik, U.3    Timmis, K.N.4
  • 9
    • 28044438533 scopus 로고    scopus 로고
    • Site-specific recombinase and integrase activities of a conjugative relaxase in recipient cells
    • Draper, O., C. E. César, C. Machón, F. de la Cruz, and M. Llosa. 2005. Site-specific recombinase and integrase activities of a conjugative relaxase in recipient cells. Proc. Natl. Acad. Sci. USA 102:16385-16390.
    • (2005) Proc. Natl. Acad. Sci. USA , vol.102 , pp. 16385-16390
    • Draper, O.1    César, C.E.2    Machón, C.3    de la Cruz, F.4    Llosa, M.5
  • 10
    • 0022204793 scopus 로고
    • Primary structure of the hip gene of Escherichia coli and of its product, the beta subunit of integration host factor
    • Flamm, E. L., and R. A. Weisberg. 1985. Primary structure of the hip gene of Escherichia coli and of its product, the beta subunit of integration host factor. J. Mol. Biol. 183:117-128.
    • (1985) J. Mol. Biol , vol.183 , pp. 117-128
    • Flamm, E.L.1    Weisberg, R.A.2
  • 11
    • 0036723772 scopus 로고    scopus 로고
    • Amplification of the tetracycline resistance determinant of pAMalpha1 in Enterococcus faecalis requires a site-specific recombination event involving relaxase
    • Francia, M. V., and D. B. Clewell. 2002. Amplification of the tetracycline resistance determinant of pAMalpha1 in Enterococcus faecalis requires a site-specific recombination event involving relaxase. J. Bacteriol. 184:5187-5193.
    • (2002) J. Bacteriol , vol.184 , pp. 5187-5193
    • Francia, M.V.1    Clewell, D.B.2
  • 12
    • 0036065207 scopus 로고    scopus 로고
    • Transfer origins in the conjugative Enterococcus faecalis plasmids pAD1 and pAM373: Identification of the pAD1 nic site, a specific relaxase and a possible TraG-like protein
    • Francia, M. V., and D. B. Clewell. 2002. Transfer origins in the conjugative Enterococcus faecalis plasmids pAD1 and pAM373: identification of the pAD1 nic site, a specific relaxase and a possible TraG-like protein. Mol. Microbiol. 45:375-395.
    • (2002) Mol. Microbiol , vol.45 , pp. 375-395
    • Francia, M.V.1    Clewell, D.B.2
  • 13
    • 0024291348 scopus 로고
    • Integration host factor: A protein for all reasons
    • Friedman, D. I. 1988. Integration host factor: a protein for all reasons. Cell 55:545-554.
    • (1988) Cell , vol.55 , pp. 545-554
    • Friedman, D.I.1
  • 14
    • 0038039152 scopus 로고    scopus 로고
    • NikAB- or NikB-dependent intracellular recombination between tandemly repeated oriT sequences of plasmid R64 in plasmid or single-stranded phage vectors
    • Furuya, N., and T. Komano. 2003. NikAB- or NikB-dependent intracellular recombination between tandemly repeated oriT sequences of plasmid R64 in plasmid or single-stranded phage vectors. J. Bacteriol. 185:3871-3877.
    • (2003) J. Bacteriol , vol.185 , pp. 3871-3877
    • Furuya, N.1    Komano, T.2
  • 15
    • 0034602931 scopus 로고    scopus 로고
    • Two active-site tyrosyl residues of protein TrwC act sequentially at the origin of transfer during plasmid R388 conjugation
    • Grandoso, G., P. Avila, A. Cayón, M. A. Hernando, M. Llosa, and F. de la Cruz. 2000. Two active-site tyrosyl residues of protein TrwC act sequentially at the origin of transfer during plasmid R388 conjugation. J. Mol. Biol. 295:1163-1172.
    • (2000) J. Mol. Biol , vol.295 , pp. 1163-1172
    • Grandoso, G.1    Avila, P.2    Cayón, A.3    Hernando, M.A.4    Llosa, M.5    de la Cruz, F.6
  • 16
    • 0025295967 scopus 로고
    • Differential plasmid rescue from transgenic mouse DNAs into Escherichia coli methylation-restriction mutants
    • Grant, S. G., J. Jessee, F. R. Bloom, and D. Hanahan. 1990. Differential plasmid rescue from transgenic mouse DNAs into Escherichia coli methylation-restriction mutants. Proc. Natl. Acad. Sci. USA 87:4645-4649.
    • (1990) Proc. Natl. Acad. Sci. USA , vol.87 , pp. 4645-4649
    • Grant, S.G.1    Jessee, J.2    Bloom, F.R.3    Hanahan, D.4
  • 18
    • 0028047404 scopus 로고
    • Genetic organization of the conjugal DNA processing region of the IncW plasmid R388
    • Llosa, M., S. Bolland, and F. de la Cruz. 1994. Genetic organization of the conjugal DNA processing region of the IncW plasmid R388. J. Mol. Biol. 235:448-7164.
    • (1994) J. Mol. Biol , vol.235 , pp. 448-7164
    • Llosa, M.1    Bolland, S.2    de la Cruz, F.3
  • 19
    • 0025811732 scopus 로고
    • Structural and functional analysis of the origin of conjugal transfer of the broad-host-range IncW plasmid R388 and comparison with the related IncN plasmid R46
    • Llosa, M., S. Bolland, and F. de la Cruz. 1991. Structural and functional analysis of the origin of conjugal transfer of the broad-host-range IncW plasmid R388 and comparison with the related IncN plasmid R46. Mol. Gen. Genet. 226:473-483.
    • (1991) Mol. Gen. Genet , vol.226 , pp. 473-483
    • Llosa, M.1    Bolland, S.2    de la Cruz, F.3
  • 20
    • 0028339873 scopus 로고    scopus 로고
    • Llosa, M., S. Bolland, G. Grandoso, and F. de la Cruz. 1994. Conjugation-independent, site-specific recombination at the oriT of the IncW plasmid R388 mediated by TrwC. J. Bacteriol. 176:3210-3217. (Erratum, 176:6414.)
    • Llosa, M., S. Bolland, G. Grandoso, and F. de la Cruz. 1994. Conjugation-independent, site-specific recombination at the oriT of the IncW plasmid R388 mediated by TrwC. J. Bacteriol. 176:3210-3217. (Erratum, 176:6414.)
  • 21
    • 11344295652 scopus 로고    scopus 로고
    • Bacterial conjugation: A potential tool for genomic engineering
    • Llosa, M., and F. de la Cruz. 2005. Bacterial conjugation: a potential tool for genomic engineering. Res. Microbiol. 156:1-6.
    • (2005) Res. Microbiol , vol.156 , pp. 1-6
    • Llosa, M.1    de la Cruz, F.2
  • 22
  • 23
    • 0030598357 scopus 로고    scopus 로고
    • Functional domains in protein TrwC of plasmid R388: Dissected DNA strand transferase and DNA helicase activities reconstitute protein function
    • Llosa, M., G. Grandoso, M. A. Hernando, and F. de la Cruz. 1996. Functional domains in protein TrwC of plasmid R388: dissected DNA strand transferase and DNA helicase activities reconstitute protein function. J. Mol. Biol. 264:56-67.
    • (1996) J. Mol. Biol , vol.264 , pp. 56-67
    • Llosa, M.1    Grandoso, G.2    Hernando, M.A.3    de la Cruz, F.4
  • 24
    • 0021646254 scopus 로고
    • Primary structure of the himA gene of Escherichia coli: Homology with DNA-binding protein HU and association with the phenylalanyl-tRNA synthetase operon
    • Miller, H. I. 1984. Primary structure of the himA gene of Escherichia coli: homology with DNA-binding protein HU and association with the phenylalanyl-tRNA synthetase operon. Cold Spring Harb. Symp. Quant. Biol. 49:691-698.
    • (1984) Cold Spring Harb. Symp. Quant. Biol , vol.49 , pp. 691-698
    • Miller, H.I.1
  • 25
    • 4344610198 scopus 로고    scopus 로고
    • DNA binding properties of protein TrwA, a possible structural variant of the Arc repressor superfamily
    • Moncalián, G., and F. de la Cruz. 2004. DNA binding properties of protein TrwA, a possible structural variant of the Arc repressor superfamily. Biochim. Biophys. Acta 1701:15-23.
    • (2004) Biochim. Biophys. Acta , vol.1701 , pp. 15-23
    • Moncalián, G.1    de la Cruz, F.2
  • 26
    • 0030790907 scopus 로고    scopus 로고
    • oriT-processing and regulatory roles of TrwA protein in plasmid R388 conjugation
    • Moncalián, G., G. Grandoso, M. Llosa, and F. de la Cruz. 1997. oriT-processing and regulatory roles of TrwA protein in plasmid R388 conjugation. J. Mol. Biol. 270:188-200.
    • (1997) J. Mol. Biol , vol.270 , pp. 188-200
    • Moncalián, G.1    Grandoso, G.2    Llosa, M.3    de la Cruz, F.4
  • 27
    • 0032991431 scopus 로고    scopus 로고
    • IHF protein inhibits cleavage but not assembly of plasmid R388 relaxosomes
    • Moncalián, G., M. Valle, J. M. Valpuesta, and F. de la Cruz. 1999. IHF protein inhibits cleavage but not assembly of plasmid R388 relaxosomes. Mol. Microbiol. 31:1643-1652.
    • (1999) Mol. Microbiol , vol.31 , pp. 1643-1652
    • Moncalián, G.1    Valle, M.2    Valpuesta, J.M.3    de la Cruz, F.4
  • 28
    • 0025285536 scopus 로고
    • Bending and supercoiling of DNA at the attachment site of bacteriophage lambda
    • Nash, H. A. 1990. Bending and supercoiling of DNA at the attachment site of bacteriophage lambda. Trends Biochem. Sci. 15:222-227.
    • (1990) Trends Biochem. Sci , vol.15 , pp. 222-227
    • Nash, H.A.1
  • 30
    • 0028219725 scopus 로고
    • Stereoselectivity of DNA catenane fusion by resolvase
    • Stark, W. M., C. N. Parker, S. E. Halford, and M. R. Boocock. 1994. Stereoselectivity of DNA catenane fusion by resolvase. Nature 368:76-78.
    • (1994) Nature , vol.368 , pp. 76-78
    • Stark, W.M.1    Parker, C.N.2    Halford, S.E.3    Boocock, M.R.4
  • 31
    • 0037127286 scopus 로고    scopus 로고
    • In vivo UV laser footprinting of the Pseudomonas putida sigma 54Pu promoter reveals that integration host factor couples transcriptional activity to growth phase
    • Valls, M., M. Buckle, and V. de Lorenzo. 2002. In vivo UV laser footprinting of the Pseudomonas putida sigma 54Pu promoter reveals that integration host factor couples transcriptional activity to growth phase. J. Biol. Chem. 277:2169-2175.
    • (2002) J. Biol. Chem , vol.277 , pp. 2169-2175
    • Valls, M.1    Buckle, M.2    de Lorenzo, V.3
  • 32
    • 0024279845 scopus 로고
    • Transcription generates positively and negatively supercoiled domains in the template
    • Wu, H. Y., S. H. Shyy, J. C. Wang, and L. F. Liu. 1988. Transcription generates positively and negatively supercoiled domains in the template. Cell 53:433-440.
    • (1988) Cell , vol.53 , pp. 433-440
    • Wu, H.Y.1    Shyy, S.H.2    Wang, J.C.3    Liu, L.F.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.