-
1
-
-
0034672094
-
Molecular basis of sequence-specific recognition of pre-ribosomal RNA by nucleolin
-
Allain FH, Bouvet P, Dieckmann T, Feigon J. 2000. Molecular basis of sequence-specific recognition of pre-ribosomal RNA by nucleolin. Embo J 19:6870-6881.
-
(2000)
Embo J
, vol.19
, pp. 6870-6881
-
-
Allain, F.H.1
Bouvet, P.2
Dieckmann, T.3
Feigon, J.4
-
2
-
-
0026579730
-
Identification and functional analysis of two U3 binding sites on yeast pre-ribosomal RNA
-
Beltrame M, Tollervey D. 1992. Identification and functional analysis of two U3 binding sites on yeast pre-ribosomal RNA. Embo J 11:1531-1542.
-
(1992)
Embo J
, vol.11
, pp. 1531-1542
-
-
Beltrame, M.1
Tollervey, D.2
-
3
-
-
0029093602
-
Base pairing between U3 and the pre-ribosomal RNA is required for 18S rRNA synthesis
-
Beltrame M, Tollervey D. 1995. Base pairing between U3 and the pre-ribosomal RNA is required for 18S rRNA synthesis. Embo J 14:4350-4356.
-
(1995)
Embo J
, vol.14
, pp. 4350-4356
-
-
Beltrame, M.1
Tollervey, D.2
-
4
-
-
0033548450
-
U3 small nucleolar RNA is essential for cleavage at sites 1,2 and 3 in pre-rRNA and determines which rRNA processing pathway is taken in Xenopus oocytes
-
Borovjagin AV, Gerbi SA. 1999. U3 small nucleolar RNA is essential for cleavage at sites 1,2 and 3 in pre-rRNA and determines which rRNA processing pathway is taken in Xenopus oocytes. J Mol Biol 286:1347-1363.
-
(1999)
J Mol Biol
, vol.286
, pp. 1347-1363
-
-
Borovjagin, A.V.1
Gerbi, S.A.2
-
5
-
-
0035726287
-
Xenopus U3 snoRNA GAC-Box A′ and Box A sequences play distinct functional roles in rRNA processing
-
Borovjagin AV, Gerbi SA. 2001. Xenopus U3 snoRNA GAC-Box A′ and Box A sequences play distinct functional roles in rRNA processing. Mol Cell Biol 21:6210-6221.
-
(2001)
Mol Cell Biol
, vol.21
, pp. 6210-6221
-
-
Borovjagin, A.V.1
Gerbi, S.A.2
-
6
-
-
2442670274
-
Xenopus U3 snoRNA docks on pre-rRNA through a novel base-pairing interaction
-
Borovjagin AV, Gerbi SA. 2004. Xenopus U3 snoRNA docks on pre-rRNA through a novel base-pairing interaction. RNA 10:942-953.
-
(2004)
RNA
, vol.10
, pp. 942-953
-
-
Borovjagin, A.V.1
Gerbi, S.A.2
-
7
-
-
0035827141
-
Recognition of pre-formed and flexible elements of an RNA stem-loop by nucleolin
-
Bouvet P, Allain FH, Finger LD, Dieckmann T, Feigon J. 2001. Recognition of pre-formed and flexible elements of an RNA stem-loop by nucleolin. J Mol Biol 309:763-775.
-
(2001)
J Mol Biol
, vol.309
, pp. 763-775
-
-
Bouvet, P.1
Allain, F.H.2
Finger, L.D.3
Dieckmann, T.4
Feigon, J.5
-
8
-
-
0020956273
-
Location of the initial cleavage sites in mouse pre-rRNA
-
Bowman LH, Goldman WE, Goldberg GI, Hebert MB, Schlessinger D. 1983. Location of the initial cleavage sites in mouse pre-rRNA. Mol Cell Biol 3:1501-1510.
-
(1983)
Mol Cell Biol
, vol.3
, pp. 1501-1510
-
-
Bowman, L.H.1
Goldman, W.E.2
Goldberg, G.I.3
Hebert, M.B.4
Schlessinger, D.5
-
9
-
-
31044454357
-
Rrp5p, a trans-acting factor in yeast ribosome biogenesis, is an RNA-binding protein with a pronounced preference for U-rich sequences
-
de Boer P, Vos HR, Faber AW, Vos JC, Raue HA. 2006. Rrp5p, a trans-acting factor in yeast ribosome biogenesis, is an RNA-binding protein with a pronounced preference for U-rich sequences. RNA 12:263-271.
-
(2006)
RNA
, vol.12
, pp. 263-271
-
-
de Boer, P.1
Vos, H.R.2
Faber, A.W.3
Vos, J.C.4
Raue, H.A.5
-
10
-
-
0037182878
-
A large nucleolar U3 ribonucleoprotein required for 18S ribosomal RNA biogenesis
-
Dragon F, Gallagher JE, Compagnone-Post PA, Mitchell BM, Porwancher KA, Wehner KA, Wormsley S, Settlage RE, Shabanowitz J, Osheim Y, Beyer AL, Hunt DF, Baserga SJ. 2002. A large nucleolar U3 ribonucleoprotein required for 18S ribosomal RNA biogenesis. Nature 417:967-970.
-
(2002)
Nature
, vol.417
, pp. 967-970
-
-
Dragon, F.1
Gallagher, J.E.2
Compagnone-Post, P.A.3
Mitchell, B.M.4
Porwancher, K.A.5
Wehner, K.A.6
Wormsley, S.7
Settlage, R.E.8
Shabanowitz, J.9
Osheim, Y.10
Beyer, A.L.11
Hunt, D.F.12
Baserga, S.J.13
-
11
-
-
0032983093
-
The roles of Rrp5p in the synthesis of yeast 18S and 5.8S rRNA can be functionally and physically separated
-
Eppens NA, Rensen S, Granneman S, Raue HA, Venema J. 1999. The roles of Rrp5p in the synthesis of yeast 18S and 5.8S rRNA can be functionally and physically separated. RNA 5:779-793.
-
(1999)
RNA
, vol.5
, pp. 779-793
-
-
Eppens, N.A.1
Rensen, S.2
Granneman, S.3
Raue, H.A.4
Venema, J.5
-
12
-
-
16544382021
-
RNA polymerase I transcription and pre-rRNA processing are linked by specific SSU processome components
-
Gallagher JE, Dunbar DA, Granneman S, Mitchell BM, Osheim Y, Beyer AL, Baserga SJ. 2004. RNA polymerase I transcription and pre-rRNA processing are linked by specific SSU processome components. Genes Dev 18:2506-2517.
-
(2004)
Genes Dev
, vol.18
, pp. 2506-2517
-
-
Gallagher, J.E.1
Dunbar, D.A.2
Granneman, S.3
Mitchell, B.M.4
Osheim, Y.5
Beyer, A.L.6
Baserga, S.J.7
-
13
-
-
11144272393
-
Pre-ribosomal processing in multicellular organisms
-
Olson MO, editor, New York: Kluwer Academic. p
-
Gerbi SA, Borovjagin AV. 2004. Pre-ribosomal processing in multicellular organisms. In: Olson MO, editor. The nucleolus. New York: Kluwer Academic. p 347.
-
(2004)
The nucleolus
, pp. 347
-
-
Gerbi, S.A.1
Borovjagin, A.V.2
-
14
-
-
0032473356
-
Nucleolin functions in the first step of ribosomal RNA processing
-
Ginisty H, Amalric F, Bouvet P. 1998. Nucleolin functions in the first step of ribosomal RNA processing. Embo J 17:1476-1486.
-
(1998)
Embo J
, vol.17
, pp. 1476-1486
-
-
Ginisty, H.1
Amalric, F.2
Bouvet, P.3
-
15
-
-
19344370199
-
Crosstalk in gene expression: Coupling and co-regulation of rDNA transcription, pre-ribosome assembly and pre-rRNA processing
-
Granneman S, Baserga SJ. 2005. Crosstalk in gene expression: Coupling and co-regulation of rDNA transcription, pre-ribosome assembly and pre-rRNA processing. Curr Opin Cell Biol 17:281-286.
-
(2005)
Curr Opin Cell Biol
, vol.17
, pp. 281-286
-
-
Granneman, S.1
Baserga, S.J.2
-
16
-
-
0027466092
-
Alternative pre-rRNA processing pathways in human cells and their alteration by cycloheximide inhibition of protein synthesis
-
Hadjiolova KV, Nicoloso M, Mazan S, Hadjiolov AA, Bachellerie JP. 1993. Alternative pre-rRNA processing pathways in human cells and their alteration by cycloheximide inhibition of protein synthesis. Eur J Biochem 212:211-215.
-
(1993)
Eur J Biochem
, vol.212
, pp. 211-215
-
-
Hadjiolova, K.V.1
Nicoloso, M.2
Mazan, S.3
Hadjiolov, A.A.4
Bachellerie, J.P.5
-
17
-
-
0024466211
-
Accurate processing of human pre-rRNA in vitro
-
Hannon GJ, Maroney PA, Branch A, Benenfield BJ, Robertson HD, Nilsen TW. 1989. Accurate processing of human pre-rRNA in vitro. Mol Cell Biol 9:4422-4431.
-
(1989)
Mol Cell Biol
, vol.9
, pp. 4422-4431
-
-
Hannon, G.J.1
Maroney, P.A.2
Branch, A.3
Benenfield, B.J.4
Robertson, H.D.5
Nilsen, T.W.6
-
18
-
-
0025932166
-
Depletion of U3 small nucleolar RNA inhibits cleavage in the 5′ external transcribed spacer of yeast pre-ribosomal RNA and impairs formation of 18S ribosomal RNA
-
Hughes JM, Ares M, Jr. 1991. Depletion of U3 small nucleolar RNA inhibits cleavage in the 5′ external transcribed spacer of yeast pre-ribosomal RNA and impairs formation of 18S ribosomal RNA. Embo J 10:4231-4239.
-
(1991)
Embo J
, vol.10
, pp. 4231-4239
-
-
Hughes, J.M.1
Ares Jr., M.2
-
19
-
-
0023387825
-
Primary processing of mammalian rRNA involves two adjacent cleavages and is not species specific
-
Kass S, Craig N, Sollner-Webb B. 1987. Primary processing of mammalian rRNA involves two adjacent cleavages and is not species specific. Mol Cell Biol 7:2891-2898.
-
(1987)
Mol Cell Biol
, vol.7
, pp. 2891-2898
-
-
Kass, S.1
Craig, N.2
Sollner-Webb, B.3
-
20
-
-
0025276512
-
The U3 small nucleolar ribonucleoprotein functions in the first step of preribosomal RNA processing
-
Kass S, Tyc K, Steitz JA, Sollner-Webb B. 1990. The U3 small nucleolar ribonucleoprotein functions in the first step of preribosomal RNA processing. Cell 60:897-908.
-
(1990)
Cell
, vol.60
, pp. 897-908
-
-
Kass, S.1
Tyc, K.2
Steitz, J.A.3
Sollner-Webb, B.4
-
21
-
-
0030786573
-
Analysis of nucleolar transcription and processing domains and pre-rRNA movements by in situ hybridization
-
Lazdins IB, Delannoy M, Sollner-Webb B. 1997. Analysis of nucleolar transcription and processing domains and pre-rRNA movements by in situ hybridization. Chromosoma 105:481-495.
-
(1997)
Chromosoma
, vol.105
, pp. 481-495
-
-
Lazdins, I.B.1
Delannoy, M.2
Sollner-Webb, B.3
-
22
-
-
0346099329
-
Components of U3 snoRNA-containing complexes shuttle between nuclei and the cytoplasm and differentially localize in nucleoli: Implications for assembly and function
-
Leary DJ, Terns MP, Huang S. 2004. Components of U3 snoRNA-containing complexes shuttle between nuclei and the cytoplasm and differentially localize in nucleoli: Implications for assembly and function. Mol Biol Cell 15:281-293.
-
(2004)
Mol Biol Cell
, vol.15
, pp. 281-293
-
-
Leary, D.J.1
Terns, M.P.2
Huang, S.3
-
23
-
-
33644877451
-
SMART 5:domains in the context of genomes and networks
-
Letunic I, Copley RR, Pils B, Pinkert S, Schultz J, Bork P. 2006. SMART 5:domains in the context of genomes and networks. Nucleic Acids Res 34:D257-260.
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Letunic, I.1
Copley, R.R.2
Pils, B.3
Pinkert, S.4
Schultz, J.5
Bork, P.6
-
24
-
-
0030785688
-
Eukaryotic ribosomal RNA: The recent excitement in the nucleotide modification problem
-
Maden BE, Hughes JM. 1997. Eukaryotic ribosomal RNA: The recent excitement in the nucleotide modification problem. Chromosoma 105:391-400.
-
(1997)
Chromosoma
, vol.105
, pp. 391-400
-
-
Maden, B.E.1
Hughes, J.M.2
-
25
-
-
0024730960
-
U3 small nuclear RNA can be psoralen-cross-linked in vivo to the 5′ external transcribed spacer of pre-ribosomal-RNA
-
Maser RL, Calvet JP. 1989. U3 small nuclear RNA can be psoralen-cross-linked in vivo to the 5′ external transcribed spacer of pre-ribosomal-RNA. Proc Natl Acad Sci U S A 86:6523-6527.
-
(1989)
Proc Natl Acad Sci U S A
, vol.86
, pp. 6523-6527
-
-
Maser, R.L.1
Calvet, J.P.2
-
26
-
-
0031940245
-
The HAT helix, a repetitive motif implicated in RNA processing
-
Preker PJ, Keller W. 1998. The HAT helix, a repetitive motif implicated in RNA processing. Trends Biochem Sci 23:15-16.
-
(1998)
Trends Biochem Sci
, vol.23
, pp. 15-16
-
-
Preker, P.J.1
Keller, W.2
-
27
-
-
0032568655
-
SMART, a simple modular architecture research tool: Identification of signaling domains
-
Schultz J, Milpetz F, Bork P, Ponting CP. 1998. SMART, a simple modular architecture research tool: Identification of signaling domains. Proc Natl Acad Sci U S A 95:5857-5864.
-
(1998)
Proc Natl Acad Sci U S A
, vol.95
, pp. 5857-5864
-
-
Schultz, J.1
Milpetz, F.2
Bork, P.3
Ponting, C.P.4
-
28
-
-
0032771416
-
Base pairing between U3 small nucleolar RNA and the 5′ end of 18S rRNA is required for pre-rRNA processing
-
Sharma K, Tollervey D. 1999. Base pairing between U3 small nucleolar RNA and the 5′ end of 18S rRNA is required for pre-rRNA processing. Mol Cell Biol 19:6012-6019.
-
(1999)
Mol Cell Biol
, vol.19
, pp. 6012-6019
-
-
Sharma, K.1
Tollervey, D.2
-
29
-
-
0345017076
-
Identification of a novel protein from glial cells based on its ability to interact with NF-kappaB subunits
-
Sweet T, Khalili K, Sawaya BE, Amini S. 2003. Identification of a novel protein from glial cells based on its ability to interact with NF-kappaB subunits. J Cell Biochem 90:884-891.
-
(2003)
J Cell Biochem
, vol.90
, pp. 884-891
-
-
Sweet, T.1
Khalili, K.2
Sawaya, B.E.3
Amini, S.4
-
30
-
-
21644470522
-
Interplay between NFBP and NF-kappa3 modulates tat activation of the LTR
-
Sweet T, Sawaya BE, Khalili K, Amini S. 2005. Interplay between NFBP and NF-kappa3 modulates tat activation of the LTR. J Cell Physiol 204:375-380.
-
(2005)
J Cell Physiol
, vol.204
, pp. 375-380
-
-
Sweet, T.1
Sawaya, B.E.2
Khalili, K.3
Amini, S.4
-
31
-
-
0031761922
-
Two mutant forms of the SI/TPR-containing protein Rrp5p affect the 18S rRNA synthesis in Saccharomyces cerevisiae
-
Torchet C, Jacq C, Hermann-Le Denmat S. 1998. Two mutant forms of the SI/TPR-containing protein Rrp5p affect the 18S rRNA synthesis in Saccharomyces cerevisiae. RNA 4:1636-1652.
-
(1998)
RNA
, vol.4
, pp. 1636-1652
-
-
Torchet, C.1
Jacq, C.2
Hermann-Le Denmat, S.3
-
32
-
-
0028618662
-
Requirement for intron-encoded U22 small nucleolar RNA in 18S ribosomal RNA maturation
-
Tycowski KT, Shu MD, Steitz JA. 1994. Requirement for intron-encoded U22 small nucleolar RNA in 18S ribosomal RNA maturation. Science 266:1558-1561.
-
(1994)
Science
, vol.266
, pp. 1558-1561
-
-
Tycowski, K.T.1
Shu, M.D.2
Steitz, J.A.3
-
33
-
-
0022432457
-
Transfection of mouse ribosomal DNA into rat cells: Faithful transcription and processing
-
Vance VB, Thompson EA, Bowman LH. 1985. Transfection of mouse ribosomal DNA into rat cells: Faithful transcription and processing. Nucleic Acids Res 13:7499-7513.
-
(1985)
Nucleic Acids Res
, vol.13
, pp. 7499-7513
-
-
Vance, V.B.1
Thompson, E.A.2
Bowman, L.H.3
-
34
-
-
0029853905
-
RRP5 is required for formation of both 18S and 5.8S rRNA in yeast
-
Venema J, Tollervey D. 1996. RRP5 is required for formation of both 18S and 5.8S rRNA in yeast. Embo J 15:5701-5714.
-
(1996)
Embo J
, vol.15
, pp. 5701-5714
-
-
Venema, J.1
Tollervey, D.2
-
35
-
-
10244245450
-
U3 snoRNP and Rrp5p associate independently with Saccharomyces cerevisiae 35S pre-rRNA, but Rrp5p is essential for association of Rok1p
-
Vos HR, Bax R, Faber AW, Vos JC, Raue HA. 2004. U3 snoRNP and Rrp5p associate independently with Saccharomyces cerevisiae 35S pre-rRNA, but Rrp5p is essential for association of Rok1p. Nucleic Acids Res 32:5827-5833.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 5827-5833
-
-
Vos, H.R.1
Bax, R.2
Faber, A.W.3
Vos, J.C.4
Raue, H.A.5
-
36
-
-
0015906273
-
Secondary structure maps of RNA: Processing of HeLa ribosomal RNA
-
Wellauer PK, Dawid IB. 1973. Secondary structure maps of RNA: Processing of HeLa ribosomal RNA. Proc Natl Acad Sci U S A 70:2827-2831.
-
(1973)
Proc Natl Acad Sci U S A
, vol.70
, pp. 2827-2831
-
-
Wellauer, P.K.1
Dawid, I.B.2
|