Arabidopsis GLAUCE promotes fertilization-independent endosperm development and expression of paternally inherited alleles

Development

Volumn 134, Issue 22, 2007, Pages 4107-4117

  Ngo, Quy A ^a   Moore, James M ^b,c   Baskar, Ramamurthy ^b,c   Grossniklaus, Ueli ^b,c   Sundaresan, Venkatesan ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b Howard Hughes Medical Institute Cold Spring Harbor Laboratory Cold Spring Harbor   (United States)

^c UNIVERSITY OF ZURICH   (Switzerland)

Author keywords

Autonomous endosperm; Embryogenesis; Fertilization; Maternal effect; Paternal allele activation; Plant reproduction; Seed development

Indexed keywords

ADENOSINE MONOPHOSPHATE DEAMINASE; ARABIDOPSIS PROTEIN; GLAUCE PROTEIN; PROTEIN FAC1; PROTEIN RPS5A; RIBOSOME PROTEIN; UNCLASSIFIED DRUG;

ARTICLE; CONTROLLED STUDY; DEVELOPMENTAL STAGE; EMBRYO DEVELOPMENT; ENDOSPERM; FERTILIZATION; GAMETOPHYTE; GENE DELETION; GENE EXPRESSION; GENE INSERTION; GENE ISOLATION; GENE MUTATION; GENETIC EPISTASIS; INHERITANCE; MUTANT; NONHUMAN; PLANT CELL; PLANT DEVELOPMENT; PLANT GENETICS; PRIORITY JOURNAL; SEED DEVELOPMENT; TRANSPOSON;

ALLELES; ARABIDOPSIS; ARABIDOPSIS PROTEINS; CHROMOSOMES, PLANT; FERTILIZATION; GAMETOGENESIS; GENE DELETION; GENE EXPRESSION REGULATION, DEVELOPMENTAL; GENE EXPRESSION REGULATION, PLANT; GENES, PLANT; INHERITANCE PATTERNS; MODELS, BIOLOGICAL; PHENOTYPE; PLANTS, GENETICALLY MODIFIED; SEEDS; TRANS-ACTIVATORS;

ARABIDOPSIS;

EID: 37249056596     PISSN: 09501991     EISSN: None     Source Type: Journal    
DOI: 10.1242/dev.007310     Document Type: Article

References (67)

1. Baroux, C., Blanvillain, R. and Grossniklaus, U. (2001). Paternally inherited genes are down-regulated but retain low activity during early embryogenesis in Arabidopsis. FEBS Lett. 509, 11-16.
2. Baroux, C., Gagliardini, V., Page, D. R. and Grossniklaus, U. (2006). Dynamic regulatory interactions of Polycomb group genes: MEDEA autoregulation is required for imprinted gene expression in Arabidopsis. Genes Dev. 20, 1081-1086.
3. Baroux, C., Pecinka, A., Fuchs, J., Schubert, I. and Grossniklaus, U. (2007). The triploid endosperm genome of Arabidopsis adopts a peculiar parental dosage-dependent chromatin organization. Plant Cell 19, 1782-1794.
4. Barrell, P. J. and Grossniklaus, U. (2005). Confocal microscopy of whole ovules for analysis of reproductive development: the elongate1 mutant affects meiosis II. Plant J. 43, 309-320.
5. Bowe, S. M., Coat, G. and dePamphilis, C. W.(2000). Phylogeny of seed plants based on all three genomic compartments: extant gymnosperms are monophyletic and Gnetales' closest relatives are conifers. Proc. Natl. Acad. Sci. USA 97, 4092-4097.
6. Bowman, J. L. (1994). Arabidopsis: An Atlas of Morphology and Development. New York: Springer-Verlag.
7. Carmichael, J. S. and Friedman, W. E. (1995). Double fertilization in Gnetum gnemon: the relationship between the cell cycle and sexual reproduction. Plant Cell 7, 1975-1988.
8. Chaudhury, A. M. and Berger, F. (2001). Maternal control of seed development. Semin. Cell Dev. Biol. 12, 381-386.
9. Chaudhury, A. M., Ming, L., Miller, C., Craig, S., Dennis, E. S. and Peacock, W. J. (1997). Fertilization-independent seed development in Arabidopsis thaliana. Proc Natl. Acad. Sci. USA 94, 4223-4228.
10. Chaw, T. M., Parkinson, C. L., Cheng, Y., Vincent, T. M. and Palmer, J. D. (2000). Seed plant phylogeny inferred from all three plant genomes: monophyly of extant gymnosperms and origin of Gnetales from conifers. Proc. Natl. Acad. Sci. USA 97, 4086-4091.
11. Choi, Y., Gehring, M., Johnson, L., Hannon, M., Harada, J. J., Goldberg, R. B., Jacobsen, S. E. and Fischer, R. L. (2002). DEMETER, a DNA glycosylase domain protein, is required for endosperm gene imprinting and seed viability in Arabidopsis. Cell 110, 33-42.
12. Choi, Y., Harada, J. J., Goldberg, R. B. and Fischer, R. L. (2004). An invariant aspartic acid in the DNA glycosylase domain of DEMETER is necessary for transcriptional activation of the imprinted MEDEA gene. Proc. Natl. Acad. Sci. USA 101, 7481-7486.
13. Colon-Carmona, A., You, R., Haimovitch-Gal, T. and Doerner, P. (1999). Spatio-temporal analysis of mitotic ativity with a labile cyclin-GUS fusion protein. Plant J. 20, 503-508.
14. Faure, J. E., Rotman, N., Fortune, P. and Dumas, C. (2002). Fertilization in Arabidopsis thaliana wild type: developmental stages and time course. Plant J. 30, 481-488.
15. Friedman, W. E. (1990). Double fertilization in Ephedra, a non-flowering seed plant: its bearing on the origin of endosperm. Science 247, 951-954.
16. Friedman, W. E. (1992). Evidence of a pre-angiosperm origin of endosperm. Science 225, 336-339.
17. Friedman, W. E. and Williams, J. H. (2004). Developmental evolution process of the sexual process in ancient flowering plant lineages. Plant Cell 16, S119-S132.
18. Friml, J., Vieten, A., Sauer, M., Weijers, D., Schwarz, H., Hamann, T., Offringa, R. and Jürgens, G. (2003). Efflux-dependent auxin gradients establish the apical-basal axis of Arabidopsis. Nature 426, 147-153.
19. Gehring, M., Choi, Y. and Fischer, R. L. (2004). Imprinting and seed development. Plant Cell 16, S203-S213.
20. Gehring, M., Huh, J. H., Hsieh, T. F., Penterman, J., Choi, Y., Harada, J. J., Goldberg, R. B. and Fischer, R. L. (2006). DEMETER DNA glycosylase establishes MEDEA polycomb gene self-imprinting by allele-specific demethylation. Cell 124, 495-506.
21. Grimanelli, D., Perotti, E., Ramirez, J. and Leblanc, O. (2005). Timing of the maternal-to-zygotic transition in early seed development in maize. Plant Cell 17, 1061-1072.
22. Grini, P. E., Jurgens, G. and Hulskamp, M. (2002). Embryo and endosperm development is disrupted in the female gametophytic capulet mutants of Arabidopsis. Genetics 162, 1911-1925.
23. Grossniklaus, U. (2005). Genomic imprinting in plants: a predominatly maternal affair. In Annual Plant Reviews: Plant Epigenetics (ed. P. Meyer), pp. 174-200. Sheffield: Blackwell.
24. Grossniklaus, U. and Vielle-Calzada, J. P. (1998)... response: Parental conflict and infanticide during embryogenesis. Trends Plant Sci. 3, 328.
25. Grossnilklaus, U., Vielle-Calzada, J. P., Hoeppner, M. A. and Gagliano, W. B. (1998). Maternal control of embryogenesis by MEDEA, a polycomb group gene in Arabidopsis. Science 280, 446-450.
26. Guitton, A. E. and Berger, F. (2005). Loss of function of MULTICOPY SUPPRESSOR OF IRA 1 produces nonviable parthenogenetic embryos in Arabidopsis. Curr Biol. 15, 750-754.
27. Guitton, A. E., Page, D. R., Chambrier, P., Lionnet, C., Faure, J. E., Grossniklaus, U. and Berger, F. (2004). Identification of new members of Fertilization Independent Seed Polycomb Group pathway involved in the control of seed development in Arabidopsis thaliana. Development 131, 2971-2981.
28. Haughn, G. and Chaudhury, A. (2005). Genetic analysis of seed coat development in Arabidopsis. Trends Plant Sci. 10, 1260-1385.
29. Ilic, K., Berleth, T. and Provart, N. J. (2004). BlastDigester - a web-based program for efficient CAPS marker design. Trends Genet. 20, 280-283.
30. Jullien, P. E., Katz, A., Oliva, M., Ohad, N. and Berger, F. (2006a). Polycomb group complexes self-regulate imprinting of the Polycomb group gene MEDEA in Arabidopsis. Curr Biol. 16, 486-492.
31. Jullien, P. E., Kinoshita, T., Ohad, N. and Berger, F. (2006b). Maintenance of DNA methylation during the Arabidopsis life cycle is essential for parental imprinting. Plant Cell 18, 1360-1372.
32. Kinoshita, T, Yadegari, R., Harada, J. J., Goldberg, R. B. and Fischer, R. L. (1999). Imprinting of the MEDEA polycomb gene in the Arabidopsis endosperm. Plant Cell 10, 1945-1952.
33. Kiyosue, T., Ohad, N., Yadegari, R., Hannon, M., Dinneny, J., Wells, D., Katz, A., Margossian, L., Harada, J. J., Goldberg, R. B. et al. (11999). Control of fertilization-independent endosperm development by the MEDEA polycomb gene in Arabidopsis. Proc. Natl. Acad. Sci. USA 96, 4186-4191.
34. Köhler, C. and Makarevich, G. (2006). Epigenetic mechanisms governing seed development in plant. EMBO Rep. 7, 1223-1227.
35. Köhler, C., Hennig, L., Bouveret, R., Gheyselinck, J., Grossniklaus, U. and Gruissem, W. (2003a). Arabidopsis MSI1 is a component of the MEA/FIE Polycomb group complex and required for seed development. EMBO J. 22, 4804-4814.
36. Köhler, C., Hennig, L., Spillane, C., Pien, S., Gruissem, W. and Grossniklaus, U. (2003b). The Polycomb-group protein MEDEA regulates seed development by controlling expression of the MADS-box gene PHERES1. Genes Dev. 17, 1540-1553.
37. Köhler, C., Page, D. R., Gagliardini, V. and Grossniklaus, U. (2005). The Arabidopsis thaliana MEDEA Polycomb group protein controls expression of PHERES1 by parental imprinting. Nat Genet. 37, 28-30.
38. Liu, C. M. and Meinke, D. W. (1998). The titan mutants of Arabidopsis are disrupted in mitosis and cell cycle control during seed development. Plant J. 16, 21-31.
39. Liu, Y. G., Mitsukawa, N., Oosumi, T. and Whittier, R. F. (1995). Efficient isolation and mapping of Arabidopsis thaliana T-DNA insert junctions by thermal asymmetric interlaced PCR. Plant. J. 8, 457-463.
40. Lopes, M. A. and Larkins, B. A. (1993). Endosperm origin, development, and function. Plant Cell 5, 1383-1399.
41. Luo, M., Bilodeau, P., Koltunow, A., Dennis, E. S., Peacock, W. J. and Chaudhury, A. (11999). Genes controlling fertilization-independent seed development in Arabidopsis thaliana. Proc Natl. Acad. Sci. USA 96, 296-301.
42. Luo, M., Bilodeau, P., Dennis, E. S., Peacock, W. J. and Chaudhury, A. (2000). Expression and parent-of-origin effects for FIS2, MEA, and FIE in the endosperm and embryo of developing [i Arabidopsis seeds. Proc. Natl. Acad. Sci. USA 97, 10637-10642.
43. Makarevich, G., Leroy, O., Akinci, U., Schubert, D., Clarenz, O., Goodrich, J., Grossniklaus, U. and Köhler, C. (2006). Different Polycomb group complexes regulate common target genes in Arabidopsis. EMBO Rep. 7, 947-952.
44. Mansfield, S. G. and Briarty, L. G. (1990). Development of the free-nuclear endosperm in Arabidopsis thaliana (L.). Arabidopsis Inf. Serv. 27, 53-64.
45. Mori, T., Kuroiwa, H., Higashiyama, T. and Kuroiwa, T. (2006). GENERATIVE CELL SPECIFIC 1 is essential for angiosperm fertilization. Nat. Cell Biol. 8, 64-71.
46. Nowack, M. K., Grini, P. E., Jakoby, M. J., Lafos, M., Koncz, C. and Schnittger, A. (2006). A positive signal from the fertilization of the egg cell sets off endosperm proliferation in angiosperm embryogenesis. Nat Genet. 38, 63-67.
47. Nowack, M. K., Shirzadi, R., Dissmeyer, N., Dolf, A., Endl, E., Grini, P. E. and Schnittger, A. (2007). Bypassing genomic imprinting allows seed development. Nature 447, 312-315.
48. Ohad, N., Margossian, L., Hsu, Y. C., Williams, C., Repetti, P. and Fischer, R. L. (1996). A mutation that allows endosperm development without fertilization. Proc. Natl. Acad. Sci. USA 93, 5319-5324.
49. Ohad, N., Yadegari, R., Margossian, L., Hannon, M., Michaeli, D., Harada, J. J., Goldberg, R. B. and Fischer, R. L. (1999). Mutations in FIE, a WD polycomb group gene, allow endosperm development without fertilization. Plant Cell 11, 407-416.
50. Page, D. R., Köhler, C., Costa-Nunes, J. A., Baroux, C., Moore, J. M. and Grossniklaus, U. (2004). Intrachromosomal excision of a hybrid Ds element induces large genomic deletions in Arabidopsis. Proc. Natl. Acad. Sci. USA 101, 2969-2974.
51. Pagnussat, G. C., Yu, H. J., Ngo, Q. A., Rajani, S., Mayalagu, S., Johnson, C. S., Capron, A., Xie, L. F., Ye, D. and Sundaresan, V. (2005). Genetic and molecular identification of genes required for female gametophyte development and function in Arabidopsis. Development 132, 603-614.
52. Parinov, S., Mayalagu, S., Ye, D., Yang, W. C., Kumaran, M. and Sundaresan, V. (1999). Analysis of flanking sequences from Ds insertion lines: a database for reverse genetics in Arabidopsis. Plant Cell 11, 2263-2270.
53. Pien, S. and Grossniklaus, U. (2007). Polycomb group and trithorax group proteins in Arabidopsis. Biochim. Biophys. Acta 1769, 375-382.
54. Portereiko, M. F., Sandaklie-Nikolova, L., Lloyd, A., Dever, C. A., Otsuga, D. and Drews, G. N. (2006a). NUCLEAR FUSION DEFECTIVE1 encodes the Arabidopsis RPL21M protein and is required for karyogamy during female gametophyte development and fertilization. Plant Physiol. 141, 957-965,
55. Portereiko, M. F., Lloyd, A., Steffen, J. G., Punwani, J. A., Otsuga, D. and Drews, G. N. (2006b). AGL80 is required for central cell and endosperm development in Arabidopsis. Plant Cell 18, 1862-1872.
56. Rotman, N., Durbarry, A., Wardle, A., Yang, W. C., Chaboud, A., Faure, J. E., Berger, F. and Twell, D. (2005). A novel class of MYB factors controls sperm-cell formation in plants. Curr. Biol. 15, 244-248.
57. Sambrook, J. and Russell, D. W. (2001). Molecular Cloning: A Laboratory Manual. New York: Cold Spring Harbor Laboratory Press.
58. Spillane, C., Baroux, C., Escobar-Restrepo, J. M., Page, D. R., Laouellle, S. and Grossniklaus, U. (2004). Transposons and tandem repeats are not involved in the control of genomic imprinting at the MEDEA locus in Arabidopsis. Cold Spring Harb. Symp. Quant. Biol. 69, 465-475.
59. Vielle-Calzada, J. P., Thomas, J., Spillane, C., Coluccio, A., Hoeppner, M. A. and Grossniklaus, U. (1999). Maintenance of genomic imprinting at the Arabidopsis Medea locus requires zygotic DDM1 activity. Genes Dev 13, 2971-2982.
60. Vielle-Calzada, J. P., Baskar, R. and Grossniklaus, U. (2000). Delayed activation of the paternal genome during seed development. Nature 404, 91-94.
61. von Besser, K., Frank, A. C., Johnson, M. A. and Preuss, D. (2006). Arabidopsis HAP2 (GCS1) is a sperm-specific gene required for pollen tube guidance and fertilization. Development 133, 4761-4769.
62. Wang, D., Tyson, M. D., Jackson, S. S. and Yadegari, R. (2006). Partially redundant functions of two SET-domain polycomb-group proteins in controlling initiation of seed development in Arabidopsis. Proc. Natl. Acad. Sci. USA 103, 13244-13249.
63. Weijers, D., Franke-van Dijk, M., Vencken, R. J., Quint, A., Hooykaas, P. and Offringa, R. (2001). An Arabidopsis Minute-like phenotype caused by a semi-dominant mutation in a RIBOSOMAL PROTEIN S5 gene. Development 128, 4289-4299.
64. Weijers, D., van Hamburg, J.-P., van Rijn, E., Hooykaas, P. and Offringa, R. (2003). Diphtheria toxin-mediated cell ablation reveals interregional communication during Arabidopsis seed development. Plant Physiol. 133, 1882-1892.
65. Xu, J., Zhang, H. Y., Xie, C. H., Xue, H. W., Kijkhuis, P. and Liu, C. M. (2005). EMBRYONIC FACTOR 1 encodes an AMP deaminase and is essential for the zygote to embryo transition in Arabidopsis. Plant J. 42, 743-756.
66. Yadegari, R., Kinoshita, T., Lotan, O., Cohen, G., Katz, A., Choi, Y., Katz, A., Nakashima, K., Harada, J. J., Goldberg, R. B. et al. (2000). Mutations in the FIE and MEA genes that encode interacting Polycomb proteins cause parent-of-origin effects on seed development by distinct mechanisms. Plant Cell 12, 2367-2382.
67. Yu, H. J., Hogan, P. and Sundaresan, V. (2005). Analysis of the female gametophyte transcriptome of Arabidopsis by comparative expression profiling. Plant Physiol. 139, 1853-1869.