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Volumn 4645 LNBI, Issue , 2007, Pages 228-239

Fast kernel methods for SVM sequence classifiers

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHMS; COMPUTATIONAL EFFICIENCY; DNA SEQUENCES; FEATURE EXTRACTION; SORTING;

EID: 37249000343     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/978-3-540-74126-8_22     Document Type: Conference Paper
Times cited : (10)

References (18)
  • 2
    • 30744433531 scopus 로고    scopus 로고
    • Armstrong, K., Bal, S.: DNA barcodes for biosecurity: invasive species identification. Philos, R. Soc. Lond. B. Biol. Sci. 360(1462), 1813-1823 (2005)
    • Armstrong, K., Bal, S.: DNA barcodes for biosecurity: invasive species identification. Philos, R. Soc. Lond. B. Biol. Sci. 360(1462), 1813-1823 (2005)
  • 4
    • 33644605459 scopus 로고    scopus 로고
    • Statistical approaches for DNA barcoding
    • Nielsen, R., Matz, M.: Statistical approaches for DNA barcoding. Systematic Biology 55(1), 162-169 (2006)
    • (2006) Systematic Biology , vol.55 , Issue.1 , pp. 162-169
    • Nielsen, R.1    Matz, M.2
  • 6
    • 29144473686 scopus 로고    scopus 로고
    • Dna barcoding: Error rates based on comprehensive sampling
    • December
    • Meyer, C.P., Paulay, G.: Dna barcoding: error rates based on comprehensive sampling. PLoS Biol. 3(12) (December 2005)
    • (2005) PLoS Biol , vol.3 , Issue.12
    • Meyer, C.P.1    Paulay, G.2
  • 7
    • 0036358995 scopus 로고    scopus 로고
    • The spectrum kernel: A string kernel for SVM protein classification
    • Leslie, CS., Eskin, E., Noble, W.S.: The spectrum kernel: A string kernel for SVM protein classification. In: Pacific Symposium on Biocomputing, pp. 566-575 (2002)
    • (2002) Pacific Symposium on Biocomputing , pp. 566-575
    • Leslie, C.S.1    Eskin, E.2    Noble, W.S.3
  • 8
    • 37249057600 scopus 로고    scopus 로고
    • Leslie, CS., Eskin, E., Weston, J., Noble, W.S.: Mismatch string kernels for SVM protein classification. In: Becker, S., Thrun, S., Obermayer, K. (eds.) NIPS, pp. 1417-1424. MIT Press, Cambridge (2002)
    • Leslie, CS., Eskin, E., Weston, J., Noble, W.S.: Mismatch string kernels for SVM protein classification. In: Becker, S., Thrun, S., Obermayer, K. (eds.) NIPS, pp. 1417-1424. MIT Press, Cambridge (2002)
  • 10
    • 0034048878 scopus 로고    scopus 로고
    • A discriminative framework for detecting remote protein homologies
    • Jaakkola, T., Diekhans, M., Haussler, D.: A discriminative framework for detecting remote protein homologies. Journal of Computational Biology 7(1-2), 95-114 (2000)
    • (2000) Journal of Computational Biology , vol.7 , Issue.1-2 , pp. 95-114
    • Jaakkola, T.1    Diekhans, M.2    Haussler, D.3
  • 14
    • 85040242730 scopus 로고    scopus 로고
    • Fast kernels for string and tree matching
    • Vishwanathan, S.V.N., Smola, A.J.: Fast kernels for string and tree matching. In: NIPS, pp. 569-576 (2002)
    • (2002) NIPS , pp. 569-576
    • Vishwanathan, S.V.N.1    Smola, A.J.2
  • 16
    • 84883575579 scopus 로고    scopus 로고
    • Fast string kernels using inexact matching for protein sequences
    • Leslie, C., Kuang, R.: Fast string kernels using inexact matching for protein sequences, J. Mach. Learn. Res. 5, 1435-1455 (2004)
    • (2004) J. Mach. Learn. Res , vol.5 , pp. 1435-1455
    • Leslie, C.1    Kuang, R.2
  • 17
    • 6944255373 scopus 로고    scopus 로고
    • Ten species in one: DNA barcoding reveals cryptic species in the neotropical skipper butterfly Astraptes fulgerator
    • Hebert, P.D.N., Penton, E.H., Burns, J.M., Janzen, D.H., Hallwachs, W.: Ten species in one: DNA barcoding reveals cryptic species in the neotropical skipper butterfly Astraptes fulgerator. In: PNAS, vol. 101, pp. 14812-14817 (2004)
    • (2004) PNAS , vol.101 , pp. 14812-14817
    • Hebert, P.D.N.1    Penton, E.H.2    Burns, J.M.3    Janzen, D.H.4    Hallwachs, W.5
  • 18
    • 0001969211 scopus 로고    scopus 로고
    • Use of receiver operating characteristic (ROC) analysis to evaluate sequence matching
    • Gribskov, M., Robinson, N.L.: Use of receiver operating characteristic (ROC) analysis to evaluate sequence matching. Computers & Chemistry 20(1), 25-33 (1996)
    • (1996) Computers & Chemistry , vol.20 , Issue.1 , pp. 25-33
    • Gribskov, M.1    Robinson, N.L.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.