-
1
-
-
0030377824
-
Protein structure alignment using dynamic programming and iterative improvement
-
Akutsu. T. 1996. Protein structure alignment using dynamic programming and iterative improvement. IEICE Trans. Inform. Syst. E79-D, 1629-1636.
-
(1996)
IEICE Trans. Inform. Syst
, vol.E79-D
, pp. 1629-1636
-
-
Akutsu, T.1
-
2
-
-
84927133610
-
Computing largest common point sets under approximate congruence
-
Ambuhl, C., Chakraborty, S., and Gartner, B. 2000. Computing largest common point sets under approximate congruence. Lect. Notes Comput. Sci. 1879, 52-63.
-
(2000)
Lect. Notes Comput. Sci
, vol.1879
, pp. 52-63
-
-
Ambuhl, C.1
Chakraborty, S.2
Gartner, B.3
-
4
-
-
0003140383
-
Computing the Fréchet distance between two polygonal curves
-
Alt, H., and Godau, M. 1995. Computing the Fréchet distance between two polygonal curves. Int. J. Comput. Geometry Appl. 5, 75-91.
-
(1995)
Int. J. Comput. Geometry Appl
, vol.5
, pp. 75-91
-
-
Alt, H.1
Godau, M.2
-
6
-
-
33748061284
-
Computing the Fréchet distance between simple polygons in polynomial time
-
Buchin, K., Buchin, M., and Wenk, C. 2006. Computing the Fréchet distance between simple polygons in polynomial time. Proc. 22nd Annu. Symp. Comput. Geom. 80-87.
-
(2006)
Proc. 22nd Annu. Symp. Comput. Geom
, pp. 80-87
-
-
Buchin, K.1
Buchin, M.2
Wenk, C.3
-
7
-
-
0033977962
-
SCOP: A structural classification of protein database
-
Conte, L., Ailey, B., Hubbard, T., et al. 2000. SCOP: a structural classification of protein database. Nucleic Acids Res. 28, 257-259.
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 257-259
-
-
Conte, L.1
Ailey, B.2
Hubbard, T.3
-
8
-
-
0004116989
-
-
2nd ed, MIT Press, Cambridge, MA
-
Cormen, T., Leiserson, C., Rivest, R., et al. 2001. Introduction to Algorithms, 2nd ed., MIT Press, Cambridge, MA.
-
(2001)
Introduction to Algorithms
-
-
Cormen, T.1
Leiserson, C.2
Rivest, R.3
-
9
-
-
0242333224
-
Geometry helps in bottleneck matching and related problems
-
Efrat, A., Itai, A., and Katz, M. 2001. Geometry helps in bottleneck matching and related problems. Algorithmica 31, 1-28.
-
(2001)
Algorithmica
, vol.31
, pp. 1-28
-
-
Efrat, A.1
Itai, A.2
Katz, M.3
-
10
-
-
37049032296
-
-
Eiter, T., and Mannila, H. 1994. Computing discrete Fréchet distance. [Technical report CD-TR 94/64]. Technical University of Vienna, Vienna, Austria.
-
Eiter, T., and Mannila, H. 1994. Computing discrete Fréchet distance. [Technical report CD-TR 94/64]. Technical University of Vienna, Vienna, Austria.
-
-
-
-
11
-
-
43049154061
-
Sur quelques points du calcul fonctionnel
-
Fréchet, M. 1906. Sur quelques points du calcul fonctionnel. Rendic. Circolo Math. Palermo 22, 1-74.
-
(1906)
Rendic. Circolo Math. Palermo
, vol.22
, pp. 1-74
-
-
Fréchet, M.1
-
12
-
-
37049031846
-
-
Godau, M. 1998. On the complexity of measuring the similarity between geometric objects in higher dimensions [Ph.D. dissertation]. Freie Universitaet, Berlin, Germany.
-
Godau, M. 1998. On the complexity of measuring the similarity between geometric objects in higher dimensions [Ph.D. dissertation]. Freie Universitaet, Berlin, Germany.
-
-
-
-
14
-
-
0033824470
-
DaliLite workbench for protein structure comparison
-
Holm, L., and Park, J. 2000. DaliLite workbench for protein structure comparison. Bioinformatics 16, 566-567.
-
(2000)
Bioinformatics
, vol.16
, pp. 566-567
-
-
Holm, L.1
Park, J.2
-
15
-
-
0027440362
-
Protein structure comparison by alignment of distance matrices
-
Holm, L., and Sander, C. 1993. Protein structure comparison by alignment of distance matrices. J. Mol. Biol. 233, 123-138.
-
(1993)
J. Mol. Biol
, vol.233
, pp. 123-138
-
-
Holm, L.1
Sander, C.2
-
17
-
-
0036355197
-
Approximate nearest neighbor algorithms for Fréchet distance via product metrics
-
Indyk, P. 2002. Approximate nearest neighbor algorithms for Fréchet distance via product metrics. Proc. 18th Annu. Symp. Comput. Geom. 102-106.
-
(2002)
Proc. 18th Annu. Symp. Comput. Geom
, pp. 102-106
-
-
Indyk, P.1
-
18
-
-
84863022204
-
Protein structure-structure alignment with discrete Fréchet distance
-
Jiang, M., Xu, Y., and Zhu, B. 2007. Protein structure-structure alignment with discrete Fréchet distance. Proc. 5th Asia-Pacific Bioinform. Conf. 131-141.
-
(2007)
Proc. 5th Asia-Pacific Bioinform. Conf
, pp. 131-141
-
-
Jiang, M.1
Xu, Y.2
Zhu, B.3
-
19
-
-
0029497647
-
On the approximation of shortest common supersequences and longest common subsequences
-
Jiang, T., and Li, M. 1995. On the approximation of shortest common supersequences and longest common subsequences. SIAM J. Comput. 24, 1122-1139.
-
(1995)
SIAM J. Comput
, vol.24
, pp. 1122-1139
-
-
Jiang, T.1
Li, M.2
-
20
-
-
37049039413
-
TALI: Local alignment of protein structures using backbone torsion angles
-
in press
-
Miao, X., Waddell, P., and Valafar, H. 2008. TALI: local alignment of protein structures using backbone torsion angles. J. Bioinform. Comput. Biol. (in press).
-
(2008)
J. Bioinform. Comput. Biol
-
-
Miao, X.1
Waddell, P.2
Valafar, H.3
-
21
-
-
0030777303
-
CATH - a hierarchic classification of protein domain structures
-
Orengo, C., Michie, A., Jones, S., et al. 1997. CATH - a hierarchic classification of protein domain structures. Structure 5, 1093-1108.
-
(1997)
Structure
, vol.5
, pp. 1093-1108
-
-
Orengo, C.1
Michie, A.2
Jones, S.3
-
22
-
-
0036839162
-
MMAMOTH (matching molecular models obtained from theory): An automated method for model comparison
-
Oritz, A., Strauss, C., and Olmea, O. 2002. MMAMOTH (matching molecular models obtained from theory): an automated method for model comparison. Protein Sci. 11, 2606-2621.
-
(2002)
Protein Sci
, vol.11
, pp. 2606-2621
-
-
Oritz, A.1
Strauss, C.2
Olmea, O.3
-
23
-
-
37849047019
-
Finding compact structural motifs
-
Qian, J., Li, S., Bu, D., et al. 2007. Finding compact structural motifs. Proc. 18th Annu. Symp. Combin. Pattern Matching 142-149.
-
(2007)
Proc. 18th Annu. Symp. Combin. Pattern Matching
, pp. 142-149
-
-
Qian, J.1
Li, S.2
Bu, D.3
-
24
-
-
0031715982
-
Protein structure alignment by incremental combinatorial extension (CE) of the optimal path
-
Shindyalov, I., and Bourne, P. 1998. Protein structure alignment by incremental combinatorial extension (CE) of the optimal path. Protein Eng. 11, 739-747.
-
(1998)
Protein Eng
, vol.11
, pp. 739-747
-
-
Shindyalov, I.1
Bourne, P.2
-
25
-
-
26444502671
-
Recognition of binding patterns common to a set of protein structures
-
Shatsky, M., Shulman-Peleg, A., Nussinov, R., et al. 2005. Recognition of binding patterns common to a set of protein structures. Lect. Notes Comput. Sci. 3500, 440-455.
-
(2005)
Lect. Notes Comput. Sci
, vol.3500
, pp. 440-455
-
-
Shatsky, M.1
Shulman-Peleg, A.2
Nussinov, R.3
-
26
-
-
0024349252
-
Protein structure alignment
-
Taylor, W., and Orengo, C. 1989. Protein structure alignment. J. Mol. Biol. 208, 1-22.
-
(1989)
J. Mol. Biol
, vol.208
, pp. 1-22
-
-
Taylor, W.1
Orengo, C.2
-
27
-
-
11244321066
-
-
Ph.D. dissertation, Freie Universitaet, Berlin, Germany
-
Wenk, C. 2002. Shape matching in higher dimensions [Ph.D. dissertation]. Freie Universitaet, Berlin, Germany.
-
(2002)
Shape matching in higher dimensions
-
-
Wenk, C.1
|