-
1
-
-
1542321529
-
Cytochrome b6f structure for signaling and vectorial metabolism
-
Allen JF (2004) Cytochrome b6f structure for signaling and vectorial metabolism. Trends Plant Sci 9:130-137
-
(2004)
Trends Plant Sci
, vol.9
, pp. 130-137
-
-
Allen, J.F.1
-
2
-
-
0023658667
-
The effect of ethylene diamine chemical modification of plastocyanin on the rate of cytochrome f oxidation and P-7001 reduction
-
Anderson GP, Sanderson DG, Lee CH, Durell S, Anderson LB, Gross EL (1987) The effect of ethylene diamine chemical modification of plastocyanin on the rate of cytochrome f oxidation and P-7001 reduction. Biochim Biophys Acta 894:386-398
-
(1987)
Biochim Biophys Acta
, vol.894
, pp. 386-398
-
-
Anderson, G.P.1
Sanderson, D.G.2
Lee, C.H.3
Durell, S.4
Anderson, L.B.5
Gross, E.L.6
-
3
-
-
0035869698
-
Concerted motions in copper plastocyanin and azurin: An essential dynamics study
-
Arcangeli C, Bizzari AR, Cannistraro S (2001) Concerted motions in copper plastocyanin and azurin: An essential dynamics study. Biophys Chem 90:45-56
-
(2001)
Biophys Chem
, vol.90
, pp. 45-56
-
-
Arcangeli, C.1
Bizzari, A.R.2
Cannistraro, S.3
-
5
-
-
0033954256
-
The protein data bank
-
Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, Weissig H, Shindyalov LN, Bourne PE (2000) The protein data bank. Nucleic Acids Res 28:235-242
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 235-242
-
-
Berman, H.M.1
Westbrook, J.2
Feng, Z.3
Gilliland, G.4
Bhat, T.N.5
Weissig, H.6
Shindyalov, L.N.7
Bourne, P.E.8
-
6
-
-
0033609516
-
Structure of the soluble domain of cytochrome f from the cyanobacterium Phormidium laminosum
-
Carrell CJ, Schlarb BG, Bendall DS, Howe CJ, Cramer WA, Smith JL (1999) Structure of the soluble domain of cytochrome f from the cyanobacterium Phormidium laminosum. Biochemistry 38:9590-9599
-
(1999)
Biochemistry
, vol.38
, pp. 9590-9599
-
-
Carrell, C.J.1
Schlarb, B.G.2
Bendall, D.S.3
Howe, C.J.4
Cramer, W.A.5
Smith, J.L.6
-
7
-
-
0034604237
-
X-ray structure of a truncated form of cytochrome f from Chlamydomonas reinhardtii
-
Chi YIL, Huang LS, Zhang Z, Fernandez-Velasco JG, Berry EA (2000) X-ray structure of a truncated form of cytochrome f from Chlamydomonas reinhardtii. Biochemistry 39:7689-7701
-
(2000)
Biochemistry
, vol.39
, pp. 7689-7701
-
-
Chi, Y.I.L.1
Huang, L.S.2
Zhang, Z.3
Fernandez-Velasco, J.G.4
Berry, E.A.5
-
8
-
-
0031467302
-
Long-term molecular dynamics simulation of copper plastocyanin in water
-
Ciocchetti A, Bizzarri AR, Cannistraro S (1997) Long-term molecular dynamics simulation of copper plastocyanin in water. Biophys Chem 69:185-198
-
(1997)
Biophys Chem
, vol.69
, pp. 185-198
-
-
Ciocchetti, A.1
Bizzarri, A.R.2
Cannistraro, S.3
-
9
-
-
0142213304
-
Close encounters of the transient kind: Protein interactions in the photosynthetic redox chain investigated by NMR spectroscopy
-
Crowley PB, Ubbink M (2003) Close encounters of the transient kind: protein interactions in the photosynthetic redox chain investigated by NMR spectroscopy. Acc Chem Res 36:723-730
-
(2003)
Acc Chem Res
, vol.36
, pp. 723-730
-
-
Crowley, P.B.1
Ubbink, M.2
-
10
-
-
1542374666
-
The parsley plastocyanin-turnip cytochrome f complex: A structurally distorted but kinetically functional acidic patch
-
Crowley PB, Hunter DM, Sato K, McFarlane W, Dennison K (2004) The parsley plastocyanin-turnip cytochrome f complex: a structurally distorted but kinetically functional acidic patch. Biochem J 378:45-51
-
(2004)
Biochem J
, vol.378
, pp. 45-51
-
-
Crowley, P.B.1
Hunter, D.M.2
Sato, K.3
McFarlane, W.4
Dennison, K.5
-
11
-
-
0035204346
-
Electrostatic analysis and Brownian dynamics simulation of the association of plastocyanin and cytochrome f
-
De Rienzo F, Gabdoulline RR, Menziani MC, De Benedetti PG, Wade RC (2001) Electrostatic analysis and Brownian dynamics simulation of the association of plastocyanin and cytochrome f. Biophys J 81:3090-3104
-
(2001)
Biophys J
, vol.81
, pp. 3090-3104
-
-
De Rienzo, F.1
Gabdoulline, R.R.2
Menziani, M.C.3
De Benedetti, P.G.4
Wade, R.C.5
-
14
-
-
33750652614
-
Brownian dynamics with hydrodynamic interactions
-
Ermak DL, McCammon JA (1978) Brownian dynamics with hydrodynamic interactions. J Phys Chem 69:1352-1360
-
(1978)
J Phys Chem
, vol.69
, pp. 1352-1360
-
-
Ermak, D.L.1
McCammon, J.A.2
-
15
-
-
0002426686
-
Electron transfer in "blue" copper proteins
-
Freeman HC (1981). Electron transfer in "blue" copper proteins. Coord Chem 21:29-52
-
(1981)
Coord Chem
, vol.21
, pp. 29-52
-
-
Freeman, H.C.1
-
16
-
-
0031714012
-
Brownian dynamics simulation of protein-protein diffusional encounter
-
Gabdoulline RR, Wade RC (1998) Brownian dynamics simulation of protein-protein diffusional encounter. Methods 14:329-341
-
(1998)
Methods
, vol.14
, pp. 329-341
-
-
Gabdoulline, R.R.1
Wade, R.C.2
-
17
-
-
0000067495
-
The role of individual lysine residues in the basic patch on turnip cytochrome f for the electrostatic interactions with plastocyanin in vitro
-
Gong XS, Wen JQ, Fisher NE, Young S, Howe CJ, Bendall DS, Gray JC (2000) The role of individual lysine residues in the basic patch on turnip cytochrome f for the electrostatic interactions with plastocyanin in vitro. Eur J Biochem 267:3461-3468
-
(2000)
Eur J Biochem
, vol.267
, pp. 3461-3468
-
-
Gong, X.S.1
Wen, J.Q.2
Fisher, N.E.3
Young, S.4
Howe, C.J.5
Bendall, D.S.6
Gray, J.C.7
-
18
-
-
0000121207
-
Cytochrome f: Structure, function and biosynthesis
-
Gray J (1992) Cytochrome f: structure, function and biosynthesis. Photosynth Res 34:359-374
-
(1992)
Photosynth Res
, vol.34
, pp. 359-374
-
-
Gray, J.1
-
19
-
-
0002652170
-
Plastocyanin: Structure, location, diffusion, electron transfer mechanisms
-
Kluwer Academic Publishers Dordrecht, the Netherlands
-
Gross EL (1996) Plastocyanin: structure, location, diffusion, electron transfer mechanisms. In: Ort D, Yocum C (eds) Oxygenic photosynthesis: the light reactions. Advances in Photosynthesis, vol 4. Kluwer Academic Publishers, Dordrecht, the Netherlands, pp 413-429
-
(1996)
Oxygenic Photosynthesis: The Light Reactions. Advances in Photosynthesis
, pp. 413-429
-
-
Gross, E.L.1
Ort, D.2
Yocum, C.3
-
20
-
-
4444261027
-
A Brownian dynamics study of the interaction of Phormidium laminosum plastocyanin with Phormidium laminosum cytochrome f
-
Gross EL (2004) A Brownian dynamics study of the interaction of Phormidium laminosum plastocyanin with Phormidium laminosum cytochrome f. Biophys J 87:2043-2059
-
(2004)
Biophys J
, vol.87
, pp. 2043-2059
-
-
Gross, E.L.1
-
21
-
-
0042822363
-
Brownian dynamics simulations of the interaction of Chlamydomonas cytochrome f with plastocyanin and cytochrome c6
-
Gross EL, Pearson Jr DC (2003) Brownian dynamics simulations of the interaction of Chlamydomonas cytochrome f with plastocyanin and cytochrome c6. Biophys J 85:2055-2068
-
(2003)
Biophys J
, vol.85
, pp. 2055-2068
-
-
Gross, E.L.1
Pearson Jr., D.C.2
-
22
-
-
0031473847
-
SWISS-MODEL and the Swiss-PdbViewer: An environment for comparative protein modeling
-
Guex N, Peitsch MC (1997) SWISS-MODEL and the Swiss-PdbViewer: an environment for comparative protein modeling. Electrophoresis 18:2714-2723
-
(1997)
Electrophoresis
, vol.18
, pp. 2714-2723
-
-
Guex, N.1
Peitsch, M.C.2
-
24
-
-
33646186478
-
A Brownian dynamics study of the effects of cytochrome f structure and deletion of its small domain in interactions with cytochrome c6 and plastocyanin in Chlamydomonas reinhardtii
-
Haddadian EJ, Gross EL (2006) A Brownian dynamics study of the effects of cytochrome f structure and deletion of its small domain in interactions with cytochrome c6 and plastocyanin in Chlamydomonas reinhardtii. Biophys J 90:566-577
-
(2006)
Biophys J
, vol.90
, pp. 566-577
-
-
Haddadian, E.J.1
Gross, E.L.2
-
25
-
-
0024519351
-
Treatment of electrostatic effects in macromolecular modeling
-
Harvey SC (1989) Treatment of electrostatic effects in macromolecular modeling. Proteins 5:78-92
-
(1989)
Proteins
, vol.5
, pp. 78-92
-
-
Harvey, S.C.1
-
26
-
-
0034598395
-
Electron transfers amongst cytochrome f, plastocyanin and photosystemI: Kinetics and mechanisms
-
Hope AB (2000) Electron transfers amongst cytochrome f, plastocyanin and photosystemI: kinetics and mechanisms. Biochim Biophys Acta 1456:5-26
-
(2000)
Biochim Biophys Acta
, vol.1456
, pp. 5-26
-
-
Hope, A.B.1
-
27
-
-
0029995705
-
The role of acidic residues of plastocyanin in its interaction with cytochrome f
-
Kannt A, Young S, Bendall DS (1996) The role of acidic residues of plastocyanin in its interaction with cytochrome f. Biochim Biophys Acta 1277:115-126
-
(1996)
Biochim Biophys Acta
, vol.1277
, pp. 115-126
-
-
Kannt, A.1
Young, S.2
Bendall, D.S.3
-
28
-
-
0242494128
-
Structure of the cytochrome b6f complex of oxygenic photosynthesis: Tuning the cavity
-
Kurisu G, Zhang H, Smith JL, Cramer WA (2003) Structure of the cytochrome b6f complex of oxygenic photosynthesis: tuning the cavity. Science 302:1009-1013
-
(2003)
Science
, vol.302
, pp. 1009-1013
-
-
Kurisu, G.1
Zhang, H.2
Smith, J.L.3
Cramer, W.A.4
-
29
-
-
18044367301
-
The transient complex of poplar plastocyanin with cytochrome f: Effects of ionic strength and pH
-
Lange C, Cornvik T, Diaz-Moreno I, Ubbink M (2005) The transient complex of poplar plastocyanin with cytochrome f: effects of ionic strength and pH. Biochim Biophys Acta 1707:179-188
-
(2005)
Biochim Biophys Acta
, vol.1707
, pp. 179-188
-
-
Lange, C.1
Cornvik, T.2
Diaz-Moreno, I.3
Ubbink, M.4
-
30
-
-
0029061465
-
Site-directed mutagenetic study on the role of negative patches on silene plastocyanin in the interactions with cytochrome f and photosystem I
-
Lee BH, Hibino T, Takabe T, Weisbeek PJ, Takabe T (1995) Site-directed mutagenetic study on the role of negative patches on silene plastocyanin in the interactions with cytochrome f and photosystem I. J Biochem (Tokyo) 117:1209-1217
-
(1995)
J Biochem (Tokyo)
, vol.117
, pp. 1209-1217
-
-
Lee, B.H.1
Hibino, T.2
Takabe, T.3
Weisbeek, P.J.4
Takabe, T.5
-
31
-
-
0028773015
-
Crystal structure of the chloroplast cytochrome f reveals a novel cytochrome fold and unexpected heme ligation
-
Martinez SE, Huang D, Szczepaniak A, Cramer WA, Smith JL (1994) Crystal structure of the chloroplast cytochrome f reveals a novel cytochrome fold and unexpected heme ligation. Structure 2:95-105
-
(1994)
Structure
, vol.2
, pp. 95-105
-
-
Martinez, S.E.1
Huang, D.2
Szczepaniak, A.3
Cramer, W.A.4
Smith, J.L.5
-
32
-
-
0029897140
-
The heme redox center of chloroplast cytochrome f is linked to a buried five-water chain
-
Martinez SE, Huang D, Ponomarev M, Cramer WA, Smith JL (1996) The heme redox center of chloroplast cytochrome f is linked to a buried five-water chain. Protein Sci 5:1081-1092
-
(1996)
Protein Sci
, vol.5
, pp. 1081-1092
-
-
Martinez, S.E.1
Huang, D.2
Ponomarev, M.3
Cramer, W.A.4
Smith, J.L.5
-
35
-
-
0024960673
-
Plastocyanin cytochrome f interaction
-
Morand LZ, Frame MK, Colvert KK, Johnson DA, Krogmann DW, Davis D (1989) Plastocyanin cytochrome f interaction. Biochemistry 28:8039-8047
-
(1989)
Biochemistry
, vol.28
, pp. 8039-8047
-
-
Morand, L.Z.1
Frame, M.K.2
Colvert, K.K.3
Johnson, D.A.4
Krogmann, D.W.5
Davis, D.6
-
36
-
-
0026513046
-
Nature of biological electron transfer
-
Moser CC, Keske JM, Warncke K, Farid RS, Dutton PL (1992) Nature of biological electron transfer. Nature 355:796-802
-
(1992)
Nature
, vol.355
, pp. 796-802
-
-
Moser, C.C.1
Keske, J.M.2
Warncke, K.3
Farid, R.S.4
Dutton, P.L.5
-
38
-
-
21444431710
-
Structure of the intermolecular complex between plastocycanin and cytochrome f from spinach
-
Musiani F, Dikyi A, Semenov AY, Ciurli S (2005) Structure of the intermolecular complex between plastocycanin and cytochrome f from spinach. J Biol Chem 280:18833-18841
-
(2005)
J Biol Chem
, vol.280
, pp. 18833-18841
-
-
Musiani, F.1
Dikyi, A.2
Semenov, A.Y.3
Ciurli, S.4
-
39
-
-
84986486656
-
A rapid finite-difference algorithm, utilizing successive over-relaxation to solve the Poisson-Boltzmann equation
-
Nicholls A, Honig B (1991) A rapid finite-difference algorithm, utilizing successive over-relaxation to solve the Poisson-Boltzmann equation. J Comp Chem 12:435-445
-
(1991)
J Comp Chem
, vol.12
, pp. 435-445
-
-
Nicholls, A.1
Honig, B.2
-
40
-
-
0003936136
-
Theoretical simulation of protein-protein interactions
-
University Science Publishers Sausalito, CA
-
Northrup SH (1996) Theoretical simulation of protein-protein interactions. In: Scott RA, Mauk AG (eds) Cytochrome c: a multidiciplinary approach. University Science Publishers, Sausalito, CA, pp 543-570
-
(1996)
Cytochrome C: A Multidiciplinary Approach
, pp. 543-570
-
-
Northrup, S.H.1
Scott, R.A.2
Mauk, A.G.3
-
42
-
-
33845282908
-
Electrostatic effects in the Brownian dynamics of association and orientation of heme proteins
-
Northrup SH, Boles JO, Reynolds JCL (1987). Electrostatic effects in the Brownian dynamics of association and orientation of heme proteins. J Phys Chem 91:5991-5998
-
(1987)
J Phys Chem
, vol.91
, pp. 5991-5998
-
-
Northrup, S.H.1
Boles, J.O.2
Reynolds, J.C.L.3
-
43
-
-
0024040620
-
Brownian dynamics of cytochrome c and cytochrome c peroxidase association
-
Northrup SH, Boles JO, Reynolds JC (1988) Brownian dynamics of cytochrome c and cytochrome c peroxidase association. Science 241:67-70
-
(1988)
Science
, vol.241
, pp. 67-70
-
-
Northrup, S.H.1
Boles, J.O.2
Reynolds, J.C.3
-
44
-
-
0027326313
-
5
-
5. Biochemistry 32:6613-6623
-
(1993)
Biochemistry
, vol.32
, pp. 6613-6623
-
-
Northrup, S.H.1
Thomasson, K.A.2
Miller, C.M.3
Barker, P.D.4
Eltis, L.D.5
Guillemette, J.G.6
Inglis, S.C.7
Mauk, A.G.8
-
45
-
-
0344474660
-
Brownian dynamics study of the interaction between plastocyanin and cytochrome f
-
Pearson DC Jr, Gross EL (1998) Brownian dynamics study of the interaction between plastocyanin and cytochrome f. Biophys J 75:2698-2711
-
(1998)
Biophys J
, vol.75
, pp. 2698-2711
-
-
Pearson Jr., D.C.1
Gross, E.L.2
-
47
-
-
0031665392
-
Plastocyanin, an electron-transfer protein
-
Sigfridsson K (1998) Plastocyanin, an electron-transfer protein. Photosynth Res 57:1-28
-
(1998)
Photosynth Res
, vol.57
, pp. 1-28
-
-
Sigfridsson, K.1
-
48
-
-
0030446029
-
Effect of the interdomain basic region of cytochrome f on its redox reactions in vivo
-
Soriano GM, Ponomarev MV, Tae GS, Cramer WA (1996) Effect of the interdomain basic region of cytochrome f on its redox reactions in vivo. Biochemistry 35:14590-14598
-
(1996)
Biochemistry
, vol.35
, pp. 14590-14598
-
-
Soriano, G.M.1
Ponomarev, M.V.2
Tae, G.S.3
Cramer, W.A.4
-
49
-
-
0344497439
-
An atypical heme in the cytochrome b(6)f complex
-
Stroebel D, Choquet Y, Popot JL, Picot D (2003) An atypical heme in the cytochrome b(6)f complex. Nature 426:413-418
-
(2003)
Nature
, vol.426
, pp. 413-418
-
-
Stroebel, D.1
Choquet, Y.2
Popot, J.L.3
Picot, D.4
-
50
-
-
0000211392
-
Plastocyanin and the blue copper proteins
-
Sykes AG (1991) Plastocyanin and the blue copper proteins. Struct Bond 75:175-224
-
(1991)
Struct Bond
, vol.75
, pp. 175-224
-
-
Sykes, A.G.1
-
51
-
-
4043055221
-
Complexes of photosynthetic redox proteins studied by NMR
-
Ubbink M (2004) Complexes of photosynthetic redox proteins studied by NMR. Photosynth Res 81:277-287
-
(2004)
Photosynth Res
, vol.81
, pp. 277-287
-
-
Ubbink, M.1
-
52
-
-
0032520957
-
The structure of the complex of plastocyanin and cytochrome f, determined by paramagnetic NMR and restrained rigid-body molecular dynamics
-
Ubbink M, Ejdebäck M, Karlsson BG, Bendall DS (1998) The structure of the complex of plastocyanin and cytochrome f, determined by paramagnetic NMR and restrained rigid-body molecular dynamics. Structure 6:323-335
-
(1998)
Structure
, vol.6
, pp. 323-335
-
-
Ubbink, M.1
Ejdebäck, M.2
Karlsson, B.G.3
Bendall, D.S.4
-
53
-
-
0020475509
-
Calculation of the electric potential in the active site cleft due to alpha-helix dipoles
-
Warwicker J, Watson HC (1982) Calculation of the electric potential in the active site cleft due to alpha-helix dipoles. J Mol Biol 157:671-679
-
(1982)
J Mol Biol
, vol.157
, pp. 671-679
-
-
Warwicker, J.1
Watson, H.C.2
-
54
-
-
0031732147
-
Crystal structure of spinach plastocyanin at 1.7 Å resolution
-
Xue Y, Okvist M, Hansson O, Young S (1998) Crystal structure of spinach plastocyanin at 1.7 Å resolution. Protein Sci 7:2099-2105
-
(1998)
Protein Sci
, vol.7
, pp. 2099-2105
-
-
Xue, Y.1
Okvist, M.2
Hansson, O.3
Young, S.4
|