메뉴 건너뛰기




Volumn 159, Issue 1-2, 2008, Pages 1-16

Molecular cloning, characterization and expression of two rapeseed (Brassica napus L.) cDNAs orthologous to Arabidopsis thaliana phenylalanine ammonia-lyase 1

Author keywords

Arabidopsis thaliana; Brassica napus L.; Cloning; Expression; Phenylalanine ammonia lyase (PAL)

Indexed keywords

ARABIDOPSIS; ARABIDOPSIS THALIANA; BRASSICA; BRASSICA NAPUS; BRASSICACEAE; ESCHERICHIA COLI;

EID: 36749077680     PISSN: 00142336     EISSN: 15735060     Source Type: Journal    
DOI: 10.1007/s10681-007-9448-9     Document Type: Article
Times cited : (16)

References (50)
  • 1
    • 84991177223 scopus 로고
    • Development of strains with yellow-seed coat in Indian mustard (Brassica juncea Czern & Coss)
    • Abraham V, Bhatia CR (1986) Development of strains with yellow-seed coat in Indian mustard (Brassica juncea Czern & Coss). Plant Breed 97:86-88
    • (1986) Plant Breed , vol.97 , pp. 86-88
    • Abraham, V.1    Bhatia, C.R.2
  • 2
    • 0032811334 scopus 로고    scopus 로고
    • Phosphorylation of phenylalanine ammonia-lyase: Evidence for a novel protein kinase and identification of the phosphorylated residue
    • Allwood EG, Davies DR, Gerrish C, Ellis BE, Bolwell GP (1999) Phosphorylation of phenylalanine ammonia-lyase: evidence for a novel protein kinase and identification of the phosphorylated residue. FEBS Lett 457:47-52
    • (1999) FEBS Lett , vol.457 , pp. 47-52
    • Allwood, E.G.1    Davies, D.R.2    Gerrish, C.3    Ellis, B.E.4    Bolwell, G.P.5
  • 6
    • 0033579464 scopus 로고    scopus 로고
    • Sequence-and structure-based prediction of eukaryotic protein phosphorylation sites
    • Blom N, Gammeltoft S, Brunak S (1999) Sequence- and structure-based prediction of eukaryotic protein phosphorylation sites. J Mol Biol 254:1351-1362
    • (1999) J Mol Biol , vol.254 , pp. 1351-1362
    • Blom, N.1    Gammeltoft, S.2    Brunak, S.3
  • 7
    • 0017184389 scopus 로고
    • A rapid and sensitive method for the quantization of microgram quantities of protein utilizing the principle of protein-dye binding
    • Bradford MM (1976) A rapid and sensitive method for the quantization of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem 72:248-254
    • (1976) Anal Biochem , vol.72 , pp. 248-254
    • Bradford, M.M.1
  • 8
    • 4444306767 scopus 로고    scopus 로고
    • Crystal structure of phenylalanine ammonia lyase: Multiple helix dipoles implicated in catalysis
    • Calabrese JC, Jordan DB, Boodhoo A, Sariaslani S, Vannelli T (2004) Crystal structure of phenylalanine ammonia lyase: multiple helix dipoles implicated in catalysis. Biochemistry 43:11403-11416
    • (2004) Biochemistry , vol.43 , pp. 11403-11416
    • Calabrese, J.C.1    Jordan, D.B.2    Boodhoo, A.3    Sariaslani, S.4    Vannelli, T.5
  • 9
    • 0042929921 scopus 로고    scopus 로고
    • Molecular cloning and characterization of a mannose-binding lectin gene from Crinum asiaticum
    • Chai Y, Pang Y, Liao Z, Zhang L, Sun X, Lu Y, Wang S, Tang K (2003) Molecular cloning and characterization of a mannose-binding lectin gene from Crinum asiaticum. J Plant Physiol 160:913-920
    • (2003) J Plant Physiol , vol.160 , pp. 913-920
    • Chai, Y.1    Pang, Y.2    Liao, Z.3    Zhang, L.4    Sun, X.5    Lu, Y.6    Wang, S.7    Tang, K.8
  • 10
    • 3242743829 scopus 로고    scopus 로고
    • The Arabidopsis phenylalanine ammonia lyase gene family: Kinetic characterization of the four PAL isoforms
    • Cochrane FC, Davin LB, Lewis NG (2004) The Arabidopsis phenylalanine ammonia lyase gene family: kinetic characterization of the four PAL isoforms. Phytochemistry 65:1557-1564
    • (2004) Phytochemistry , vol.65 , pp. 1557-1564
    • Cochrane, F.C.1    Davin, L.B.2    Lewis, N.G.3
  • 12
    • 0030087824 scopus 로고    scopus 로고
    • Phenylalanine ammonia-lyase gene structure, expression, and evolution in Nicotiana
    • Fukasawa-Akada T, Kung S-D, Watson JC (1996) Phenylalanine ammonia-lyase gene structure, expression, and evolution in Nicotiana. Plant Mol Biol 30:711-722
    • (1996) Plant Mol Biol , vol.30 , pp. 711-722
    • Fukasawa-Akada, T.1    Kung, S.-D.2    Watson, J.C.3
  • 13
    • 0029595442 scopus 로고
    • SOPMA: Significant improvement in protein secondary structure prediction by consensus prediction from multiple alignments
    • Geourjon C, Deléage G (1995) SOPMA: significant improvement in protein secondary structure prediction by consensus prediction from multiple alignments. Cabios 11:681-684
    • (1995) Cabios , vol.11 , pp. 681-684
    • Geourjon, C.1    Deléage, G.2
  • 14
    • 0026229938 scopus 로고
    • Stress response in alfalfa (Medicago sativa L.). 12. Sequence analysis of phenylalanine ammonia-lyase (PAL) cDNA clones and appearance of PAL transcripts in elicitor-treated cell cultures and developing plants
    • Gowri G, Paiva NL, Dixon RA (1991) Stress response in alfalfa (Medicago sativa L.). 12. Sequence analysis of phenylalanine ammonia-lyase (PAL) cDNA clones and appearance of PAL transcripts in elicitor-treated cell cultures and developing plants. Plant Mol Biol 17:415-429
    • (1991) Plant Mol Biol , vol.17 , pp. 415-429
    • Gowri, G.1    Paiva, N.L.2    Dixon, R.A.3
  • 15
    • 0000207681 scopus 로고
    • TMbase - A database of membrane spanning proteins segments
    • Hofmann K, Stoffel W (1993) TMbase - A database of membrane spanning proteins segments. Biol Chem Hoppe-Seyler 374:166
    • (1993) Biol Chem Hoppe-Seyler , vol.374 , pp. 166
    • Hofmann, K.1    Stoffel, W.2
  • 17
    • 0026543902 scopus 로고
    • Phenylalanine ammonia-lyase in potato (Solanum tuberosum L.). Genomic complexity, structural comparison of 2 selected genes and modes of expression
    • Joos HJ, Hahlbrock K (1992) Phenylalanine ammonia-lyase in potato (Solanum tuberosum L.). Genomic complexity, structural comparison of 2 selected genes and modes of expression. Eur J Biochem 204:621-629
    • (1992) Eur J Biochem , vol.204 , pp. 621-629
    • Joos, H.J.1    Hahlbrock, K.2
  • 18
    • 0032573213 scopus 로고    scopus 로고
    • Lignification of plant cell walls: Impact of genetic manipulation
    • Jung H-JG, Ni W (1998) Lignification of plant cell walls: impact of genetic manipulation. Proc Natl Acad Sci 95:12742-12743
    • (1998) Proc Natl Acad Sci , vol.95 , pp. 12742-12743
    • H-Jg, J.1    Ni, W.2
  • 19
    • 0030238187 scopus 로고    scopus 로고
    • Purification and characterization of phenylalanine ammonia-lyase from Ustilago maydis
    • Kim SH, Kronstad JW, Ellis BE (1996) Purification and characterization of phenylalanine ammonia-lyase from Ustilago maydis. Phytochemistry 43:351-357
    • (1996) Phytochemistry , vol.43 , pp. 351-357
    • Kim, S.H.1    Kronstad, J.W.2    Ellis, B.E.3
  • 21
    • 73049125969 scopus 로고
    • The metabolism of aromatic compounds in higher plants. IV. Purification and properties of the phenylalanine deaminase of Hordeum vulgare
    • Koukol J, Conn EE (1961) The metabolism of aromatic compounds in higher plants. IV. Purification and properties of the phenylalanine deaminase of Hordeum vulgare. J Biol Chem 236:2692-2698
    • (1961) J Biol Chem , vol.236 , pp. 2692-2698
    • Koukol, J.1    Conn, E.E.2
  • 22
    • 0034805320 scopus 로고    scopus 로고
    • The phenylalanine ammonia-lyase gene family in raspberry. Structure, expression, and evolution
    • Kumar A, Ellis BE (2001) The phenylalanine ammonia-lyase gene family in raspberry. Structure, expression, and evolution. Plant Physiol 127:230-239
    • (2001) Plant Physiol , vol.127 , pp. 230-239
    • Kumar, A.1    Ellis, B.E.2
  • 23
    • 0031771373 scopus 로고    scopus 로고
    • Comparative mapping between Arabidopsis thaliana and Brassica nigra indicates that Brassica genomes have evolved through extensive genome replication accompanied by chromosome fusions and frequent rearrangements
    • Lagercrantz U (1998) Comparative mapping between Arabidopsis thaliana and Brassica nigra indicates that Brassica genomes have evolved through extensive genome replication accompanied by chromosome fusions and frequent rearrangements. Genetics 150:1217-1228
    • (1998) Genetics , vol.150 , pp. 1217-1228
    • Lagercrantz, U.1
  • 24
    • 0342602049 scopus 로고    scopus 로고
    • Identification of essential amino acids in phenylalanine ammonia-lyase by site-directed mutagenesis
    • Langer B, Röther D, Rétey J (1997) Identification of essential amino acids in phenylalanine ammonia-lyase by site-directed mutagenesis. Biochemistry 36:10867-10871
    • (1997) Biochemistry , vol.36 , pp. 10867-10871
    • Langer, B.1    Röther, D.2    Rétey, J.3
  • 25
    • 36749001722 scopus 로고    scopus 로고
    • The relationship of color formation with related enzymes and protein contents in the seed coat of oilseed rape (Brassica napus)
    • Liang Y, Li J-n (2004) The relationship of color formation with related enzymes and protein contents in the seed coat of oilseed rape (Brassica napus). Agri Sci China 3:384-391
    • (2004) Agri Sci China , vol.3 , pp. 384-391
    • Liang, Y.1    J-N, L.2
  • 26
    • 0345403931 scopus 로고
    • A phenylalanine ammonia-lyase gene from parsley: Structure, regulation, and identification of elicitor and light-responsive cis-acting elements
    • Lois R, Dietrich A, Hahlbrock K, Schulz W (1989) A phenylalanine ammonia-lyase gene from parsley: structure, regulation, and identification of elicitor and light-responsive cis-acting elements. EMBO J 8:1641-1648
    • (1989) EMBO J , vol.8 , pp. 1641-1648
    • Lois, R.1    Dietrich, A.2    Hahlbrock, K.3    Schulz, W.4
  • 27
    • 84961484194 scopus 로고
    • Differential wound activation of members of the phenylalanine ammonia-lyase and 4-coumarate-CoA ligase gene families in various organs of parsley plants
    • Lois R, Hahlbrock K (1992) Differential wound activation of members of the phenylalanine ammonia-lyase and 4-coumarate-CoA ligase gene families in various organs of parsley plants. Z Naturforsch C 47:90-94
    • (1992) Z Naturforsch C , vol.47 , pp. 90-94
    • Lois, R.1    Hahlbrock, K.2
  • 28
    • 33750038830 scopus 로고    scopus 로고
    • Identification of quantitative trait loci (QTL) for oil and protein contents and their relationships with other seed quality traits in Brassica juncea
    • Mahmood T, Rahman MH, Stringam GR, Yeh F, Good AG (2006) Identification of quantitative trait loci (QTL) for oil and protein contents and their relationships with other seed quality traits in Brassica juncea. Theor Appl Genet 113:1211-1220
    • (2006) Theor Appl Genet , vol.113 , pp. 1211-1220
    • Mahmood, T.1    Rahman, M.H.2    Stringam, G.R.3    Yeh, F.4    Good, A.G.5
  • 29
    • 3242887157 scopus 로고    scopus 로고
    • CD-Search: Protein domain annotations on the fly
    • Marchler-Bauer A, Bryant SH (2004) CD-Search: protein domain annotations on the fly. Nucl Acids Res 32:W327-W331
    • (2004) Nucl Acids Res , vol.32
    • Marchler-Bauer, A.1    Bryant, S.H.2
  • 30
    • 1042279415 scopus 로고    scopus 로고
    • Histochemical characterisation of unextractable seed coat pigments and quantification of extractable lignin in the Brassicaceae
    • Marles MS, Gruber MY (2004) Histochemical characterisation of unextractable seed coat pigments and quantification of extractable lignin in the Brassicaceae. J Sci Food Agric 84:251-262
    • (2004) J Sci Food Agric , vol.84 , pp. 251-262
    • Marles, M.S.1    Gruber, M.Y.2
  • 31
    • 0024975177 scopus 로고
    • Structure and some characterization of the gene for phenylalanine ammonia-lyase from rice plants
    • Minami E, Ozeki Y, Matsuoka M, Koizuka N, Tanaka Y (1989) Structure and some characterization of the gene for phenylalanine ammonia-lyase from rice plants. Eur J Biochem 185:19-25
    • (1989) Eur J Biochem , vol.185 , pp. 19-25
    • Minami, E.1    Ozeki, Y.2    Matsuoka, M.3    Koizuka, N.4    Tanaka, Y.5
  • 33
    • 18044364010 scopus 로고    scopus 로고
    • Structural basis for the entrance into the phenylpropanoid metabolism catalyzed by phenylalanine ammonia-lyase
    • Ritter H, Schulz GE (2004) Structural basis for the entrance into the phenylpropanoid metabolism catalyzed by phenylalanine ammonia-lyase. Plant Cell 16:3426-3436
    • (2004) Plant Cell , vol.16 , pp. 3426-3436
    • Ritter, H.1    Schulz, G.E.2
  • 34
    • 1842287997 scopus 로고    scopus 로고
    • Maize phenylalanine ammonia-lyase has tyrosine ammonia-lyase activity
    • Rosler J, Krekel F, Amrhein N, Schmid J (1997) Maize phenylalanine ammonia-lyase has tyrosine ammonia-lyase activity. Plant Physiol 113:175-179
    • (1997) Plant Physiol , vol.113 , pp. 175-179
    • Rosler, J.1    Krekel, F.2    Amrhein, N.3    Schmid, J.4
  • 35
    • 0036311143 scopus 로고    scopus 로고
    • An active site homology model of phenylalanine ammonia-lyase from Petroselinum crispum
    • Röther D, Poppe L, Morlock G, Viergutz S, Rétey J (2002) An active site homology model of phenylalanine ammonia-lyase from Petroselinum crispum. Eur J Biochem 269:3065-3075
    • (2002) Eur J Biochem , vol.269 , pp. 3065-3075
    • Röther, D.1    Poppe, L.2    Morlock, G.3    Viergutz, S.4    Rétey, J.5
  • 37
    • 0035060915 scopus 로고    scopus 로고
    • Comparative structural genomics in the Brassicaceae family
    • Schmidt R, Acarkan A, Boivin K (2001) Comparative structural genomics in the Brassicaceae family. Plant Physiol Biochem 39:253-262
    • (2001) Plant Physiol Biochem , vol.39 , pp. 253-262
    • Schmidt, R.1    Acarkan, A.2    Boivin, K.3
  • 38
    • 0027992090 scopus 로고
    • Serine-202 is the putative precursor of the active site dehydroalanine of phenylalanine ammonia lyase. Site-directed mutagenesis studies on the enzyme from parsley (Petroselinum crispum L.)
    • Schuster B, Rétey J (1994) Serine-202 is the putative precursor of the active site dehydroalanine of phenylalanine ammonia lyase. Site-directed mutagenesis studies on the enzyme from parsley (Petroselinum crispum L.). FEBS Lett 349:252-254
    • (1994) FEBS Lett , vol.349 , pp. 252-254
    • Schuster, B.1    Rétey, J.2
  • 39
    • 0042622380 scopus 로고    scopus 로고
    • SWISS-MODEL: An automated protein homology-modeling server
    • Schwede T, Kopp J, Guex N, Peitsch MC (2003) SWISS-MODEL: an automated protein homology-modeling server. Nucl Acids Res 31:3381-3385
    • (2003) Nucl Acids Res , vol.31 , pp. 3381-3385
    • Schwede, T.1    Kopp, J.2    Guex, N.3    Peitsch, M.C.4
  • 40
    • 0031397140 scopus 로고    scopus 로고
    • Reduced lignin content and altered lignin composition in transgenic tobacco down-regulated in expression of L-phenylalanine ammonia-lyase or cinnamate 4-hydroxylase
    • Sewalt VJH, Ni W, Blount JW, Jung HG, Masoud SA, Howles PA, Lamb C, Dixon RA (1997) Reduced lignin content and altered lignin composition in transgenic tobacco down-regulated in expression of L-phenylalanine ammonia-lyase or cinnamate 4-hydroxylase. Plant Physiol 115:41-50
    • (1997) Plant Physiol , vol.115 , pp. 41-50
    • Sewalt, V.J.H.1    Ni, W.2    Blount, J.W.3    Jung, H.G.4    Masoud, S.A.5    Howles, P.A.6    Lamb, C.7    Dixon, R.A.8
  • 41
    • 0041320812 scopus 로고    scopus 로고
    • Phenylpropanoid compounds and disease resistance in transgenic tobacco with altered expression of L-phenylalanine ammonia-lyase
    • Shadle GL, Wesley SV, Korth KL, Chen F, Lamb C, Dixon RA (2003) Phenylpropanoid compounds and disease resistance in transgenic tobacco with altered expression of L-phenylalanine ammonia-lyase. Phytochemistry 64:153-161
    • (2003) Phytochemistry , vol.64 , pp. 153-161
    • Shadle, G.L.1    Wesley, S.V.2    Korth, K.L.3    Chen, F.4    Lamb, C.5    Dixon, R.A.6
  • 42
    • 0025349785 scopus 로고
    • Wound-induced phenylalanine ammonia-lyase in potato (Solanum tuberosum) tuber discs. Significance of glycosylation and immunolocalization of enzyme subunits
    • Shaw NM, Bolwell GP, Smith C (1990) Wound-induced phenylalanine ammonia-lyase in potato (Solanum tuberosum) tuber discs. Significance of glycosylation and immunolocalization of enzyme subunits. Biochem J 267:163-170
    • (1990) Biochem J , vol.267 , pp. 163-170
    • Shaw, N.M.1    Bolwell, G.P.2    Smith, C.3
  • 43
    • 0027588847 scopus 로고
    • Structure, inheritance, and expression of hybrid poplar (Populus trichocarpa x Populus deltoides) phenylalanine ammonia-lyase genes
    • Subramaniam R, Reinold S, Molitor EK, Douglas CJ (1993) Structure, inheritance, and expression of hybrid poplar (Populus trichocarpa x Populus deltoides) phenylalanine ammonia-lyase genes. Plant Physiol 102:71-83
    • (1993) Plant Physiol , vol.102 , pp. 71-83
    • Subramaniam, R.1    Reinold, S.2    Molitor, E.K.3    Douglas, C.J.4
  • 44
    • 14744282479 scopus 로고
    • Single tree genetic linkage mapping in conifers using haploid DNA from megagametophytes
    • Tulsieram LK, Glaubitz JC, Kiss G, Carlson JE (1992) Single tree genetic linkage mapping in conifers using haploid DNA from megagametophytes. Biotechnology 10:686-690
    • (1992) Biotechnology , vol.10 , pp. 686-690
    • Tulsieram, L.K.1    Glaubitz, J.C.2    Kiss, G.3    Carlson, J.E.4
  • 45
    • 0029140785 scopus 로고
    • The phenylalanine ammonia-lyase gene family in Arabidopsis thaliana
    • Wanner LA, Li G, Ware D, Somssich IE, Davis KR (1995) The phenylalanine ammonia-lyase gene family in Arabidopsis thaliana. Plant Mol Biol 27:327-338
    • (1995) Plant Mol Biol , vol.27 , pp. 327-338
    • Wanner, L.A.1    Li, G.2    Ware, D.3    Somssich, I.E.4    Davis, K.R.5
  • 46
    • 0000048628 scopus 로고
    • Phenylalanine ammonia-lyase from loblolly pine: Purification of the enzyme and isolation of complementary DNA clones
    • Whetten RW, Sederoff RR (1992) Phenylalanine ammonia-lyase from loblolly pine: purification of the enzyme and isolation of complementary DNA clones. Plant Physiol 98:380-386
    • (1992) Plant Physiol , vol.98 , pp. 380-386
    • Whetten, R.W.1    Sederoff, R.R.2
  • 47
    • 33846644531 scopus 로고    scopus 로고
    • Cloning and molecular characterization of a functional flavonoid 3′-hydroxylase gene from Brassica napus
    • Xu BB, Li JN, Zhang XK, Wang R, Xie LL, Chai YR (2007) Cloning and molecular characterization of a functional flavonoid 3′-hydroxylase gene from Brassica napus. J Plant Physiol 164:350-363
    • (2007) J Plant Physiol , vol.164 , pp. 350-363
    • Xu, B.B.1    Li, J.N.2    Zhang, X.K.3    Wang, R.4    Xie, L.L.5    Chai, Y.R.6
  • 49
    • 1442357095 scopus 로고    scopus 로고
    • RNA isolation from highly viscous samples rich in polyphenols and polysaccharides
    • Zeng Y, Yang T (2002) RNA isolation from highly viscous samples rich in polyphenols and polysaccharides. Plant Mol Biol Rep 20:417a-417e
    • (2002) Plant Mol Biol Rep , vol.20
    • Zeng, Y.1    Yang, T.2
  • 50
    • 33745209668 scopus 로고    scopus 로고
    • Conditional QTL mapping of oil content in rapeseed with respect to protein content and traits related to plant development and grain yield
    • Zhao J, Becker HC, Zhang D, Zhang Y, Ecke W (2006) Conditional QTL mapping of oil content in rapeseed with respect to protein content and traits related to plant development and grain yield. Theor Appl Genet 113:33-38
    • (2006) Theor Appl Genet , vol.113 , pp. 33-38
    • Zhao, J.1    Becker, H.C.2    Zhang, D.3    Zhang, Y.4    Ecke, W.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.