Species-specific evolution of immune receptor tyrosine based activation motif-containing CEACAM1-related immune receptors in the dog

BMC Evolutionary Biology

Volumn 7, Issue , 2007, Pages

  Kammerer, Robert ^a,b   Popp, Tanja ^a   Härtle, Stefan ^a   Singer, Bernhard B ^c   Zimmermann, Wolfgang ^a  

^a UNIVERSITY OF MUNICH   (Germany)

^b INSTITUTE OF EPIDEMIOLOGY   (Germany)

^c UNIVERSITY HOSPITAL ESSEN   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

CARCINOEMBRYONIC ANTIGEN RELATED CELL ADHESION MOLECULE 1; CARCINOEMBRYONIC ANTIGEN RELATED CELL ADHESION MOLECULE 28; MEMBRANE PROTEIN; UNCLASSIFIED DRUG; CARCINOEMBRYONIC ANTIGEN; CD66 ANTIGENS; CELL ADHESION MOLECULE; IMMUNOGLOBULIN RECEPTOR; ISOPROTEIN; LEUKOCYTE ANTIGEN; TYROSINE;

ANIMAL TISSUE; ARTICLE; DOG; EVOLUTION; FLOW CYTOMETRY; GENE DUPLICATION; GENE EXPRESSION; IMMUNE SYSTEM; LIGAND BINDING; MULTIGENE FAMILY; NONHUMAN; NUCLEOTIDE SEQUENCE; PATHOGENESIS; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SPECIES DIFFERENCE; T LYMPHOCYTE; ALTERNATIVE RNA SPLICING; AMINO ACID SEQUENCE; ANIMAL; BIOLOGICAL MODEL; CELL CULTURE; CHEMISTRY; CYTOLOGY; DNA SEQUENCE; GENE EXPRESSION PROFILING; GENETICS; HUMAN; METABOLISM; MOLECULAR EVOLUTION; MOLECULAR GENETICS; MOUSE; PHYLOGENY; PROTEIN TERTIARY STRUCTURE; SEQUENCE HOMOLOGY;

CANIS FAMILIARIS; EUTHERIA; MAMMALIA; MURINAE; MUS; RODENTIA;

ALTERNATIVE SPLICING; AMINO ACID SEQUENCE; ANIMALS; ANTIGENS, CD; CARCINOEMBRYONIC ANTIGEN; CELL ADHESION MOLECULES; CELLS, CULTURED; DOGS; EVOLUTION, MOLECULAR; FLOW CYTOMETRY; GENE EXPRESSION PROFILING; HUMANS; MICE; MODELS, BIOLOGICAL; MOLECULAR SEQUENCE DATA; PHYLOGENY; PROTEIN ISOFORMS; PROTEIN STRUCTURE, TERTIARY; RECEPTORS, IMMUNOLOGIC; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, AMINO ACID; SPECIES SPECIFICITY; T-LYMPHOCYTES; TYROSINE;

EID: 36749051780     PISSN: None     EISSN: 14712148     Source Type: Journal    
DOI: 10.1186/1471-2148-7-196     Document Type: Article

References (54)

1. Membrane proteins with immunoglobulin-like domains - a master superfamily of interaction molecules. AN Barclay, Semin Immunol 2003 15 215 223 10.1016/S1044-5323(03)00047-2 14690046
2. The DNA sequence and biology of human chromosome 19. J Grimwood LA Gordon A Olsen A Terry J Schmutz J Lamerdin U Hellsten D Goodstein O Couronne M Tran-Gyamfi A Aerts M Altherr L Ashworth E Bajorek S Black E Branscomb S Caenepeel A Carrano C Caoile YM Chan M Christensen CA Cleland A Copeland E Dalin P Dehal M Denys JC Detter J Escobar D Flowers D Fotopulos C Garcia AM Georgescu T Glavina M Gomez E Gonzales M Groza N Hammon T Hawkins L Haydu I Ho W Huang S Israni J Jett K Kadner H Kimball A Kobayashi V Larionov SH Leem F Lopez Y Lou S Lowry S Malfatti D Martinez P McCready C Medina J Morgan K Nelson M Nolan I Ovcharenko S Pitluck M Pollard AP Popkie P Predki G Quan L Ramirez S Rash J Retterer A Rodriguez S Rogers A Salamov A Salazar X She D Smith T Slezak V Solovyev N Thayer H Tice M Tsai A Ustaszewska N Vo M Wagner J Wheeler K Wu G Xie J Yang I Dubchak TS Furey P DeJong M Dickson D Gordon EE Eichler LA Pennacchio P Richardson L Stubbs DS Rokhsar RM Myers EM Rubin SM Lucas, Nature 2004 428 529 535 10.1038/nature02399 15057824
3. Identification of a novel group of evolutionarily conserved members within the rapidly diverging murine Cea family. R Zebhauser R Kammerer A Eisenried A McLellan T Moore W Zimmermann, Genomics 2005 86 566 580 10.1016/j.ygeno.2005.07.008 16139472
4. Redefined nomenclature for members of the carcinoembryonic antigen family. N Beauchemin P Draber G Dveksler P Gold S Gray-Owen F Grunert S Hammarstrom KV Holmes A Karlsson M Kuroki SH Lin L Lucka SM Najjar M Neumaier B Obrink JE Shively KM Skubitz CP Stanners P Thomas JA Thompson M Virji S von Kleist C Wagener S Watt W Zimmermann, Exp Cell Res 1999 252 243 249 10.1006/excr.1999.4610 11501563
5. Identification of allelic variants of the bovine immune regulatory molecule CEACAM1 implies a pathogen-driven evolution. R Kammerer T Popp BB Singer J Schlender W Zimmermann, Gene 2004 339 99 109 10.1016/j.gene.2004.06.023 15363850
6. Conservation of pregnancy-specific glycoprotein (PSG) N domains following independent expansions of the gene families in rodents and primates. AS McLellan W Zimmermann T Moore, BMC Evol Biol 2005 5 39 15987510 10.1186/1471-2148-5-39
7. CEA Homepage. 2007
8. CEACAM1: contact-dependent control of immunity. SD Gray-Owen RS Blumberg, Nat Rev Immunol 2006 6 433 446 10.1038/nri1864 16724098
9. CD66a interactions between human melanoma and NK cells: a novel class I MHC-independent inhibitory mechanism of cytotoxicity. G Markel N Lieberman G Katz TI Arnon M Lotem O Drize RS Blumberg E Bar-Haim R Mader L Eisenbach O Mandelboim, J Immunol 2002 168 2803 2810 11884449
10. Biliary glycoprotein (BGP) expression on T cells and on a natural-killer-cell sub-population. MJ Moller R Kammerer F Grunert S von Kleist, Int J Cancer 1996 65 740 745 10.1002/(SICI)1097-0215(19960315)65:6<740::AID- IJC5>3.0.CO;2-Z 8631584
11. CEACAM1 is a potent regulator of B cell receptor complex-induced activation. G Greicius E Severinson N Beauchemin B Obrink BB Singer, J Leukoc Biol 2003 74 126 134 10.1189/jlb.1202594 12832451
12. Biliary glycoprotein (CD66a), a cell adhesion molecule of the immunoglobulin superfamily, on human lymphocytes: structure, expression and involvement in T cell activation. R Kammerer S Hahn BB Singer JS Luo S von Kleist, Eur J Immunol 1998 28 3664 3674 10.1002/(SICI)1521-4141(199811)28: 11<3664::AID-IMMU3664>3.0.CO;2-D 9842909
13. Carcinoembryonic antigen-related cell adhesion molecule 1 on murine dendritic cells is a potent regulator of T cell stimulation. R Kammerer D Stober BB Singer B Obrink J Reimann, J Immunol 2001 166 6537 6544 11359805
14. CEACAM1 (CD66a) mediates delay of spontaneous and Fas ligand-induced apoptosis in granulocytes. BB Singer E Klaile I Scheffrahn MM Muller R Kammerer W Reutter B Obrink L Lucka, Eur J Immunol 2005 35 1949 1959 10.1002/eji. 200425691 15909305
15. CEACAM1 (CD66a) promotes human monocyte survival via a phosphatidylinositol 3-kinase- and AKT-dependent pathway. Q Yu EM Chow H Wong J Gu O Mandelboim SD Gray-Owen MA Ostrowski, J Biol Chem 2006 281 39179 39193 10.1074/jbc.M608864200 17071610
16. CD66a, CD66b, CD66c, and CD66d each independently stimulate neutrophils. KM Skubitz KD Campbell AP Skubitz, J Leukoc Biol 1996 60 106 117 8699114
17. The CGM1a (CEACAM3/CD66d)-mediated phagocytic pathway of Neisseria gonorrhoeae expressing opacity proteins is also the pathway to cell death. T Chen S Bolland I Chen J Parker M Pantelic F Grunert W Zimmermann, J Biol Chem 2001 276 17413 17419 10.1074/jbc.M010609200 11278708
18. Immunoreceptor tyrosine-based activation motif phosphorylation during engulfment of Neisseria gonorrhoeae by the neutrophil-restricted CEACAM3 (CD66d) receptor. SE McCaw J Schneider EH Liao W Zimmermann SD Gray-Owen, Mol Microbiol 2003 49 623 637 10.1046/j.1365-2958.2003.03591.x 12864848
19. Several carcinoembryonic antigens (CD66) serve as receptors for gonococcal opacity proteins. T Chen F Grunert A Medina-Marino EC Gotschlich, J Exp Med 1997 185 1557 1564 10.1084/jem.185.9.1557 9151893
20. A novel cell-binding mechanism of Moraxella catarrhalis ubiquitous surface protein UspA: specific targeting of the N-domain of carcinoembryonic antigen-related cell adhesion molecules by UspA1. DJ Hill M Virji, Mol Microbiol 2003 48 117 129 10.1046/j.1365-2958.2003.03433.x 12657049
21. Carcinoembryonic antigens are targeted by diverse strains of typable and non-typable Haemophilus influenzae. M Virji D Evans J Griffith D Hill L Serino A Hadfield SM Watt, Mol Microbiol 2000 36 784 795 10.1046/j.1365-2958.2000.01885. x 10844667
22. Cloning of the mouse hepatitis virus (MHV) receptor: expression in human and hamster cell lines confers susceptibility to MHV. GS Dveksler MN Pensiero CB Cardellichio RK Williams GS Jiang KV Holmes CW Dieffenbach, J Virol 1991 65 6881 6891 1719235
23. Neisserial binding to CEACAM1 arrests the activation and proliferation of CD4+ T lymphocytes. IC Boulton SD Gray-Owen, Nat Immunol 2002 3 229 236 10.1038/ni769 11850628
24. Granulocyte CEACAM3 is a phagocytic receptor of the innate immune system that mediates recognition and elimination of human-specific pathogens. T Schmitter F Agerer L Peterson P Munzner CR Hauck, J Exp Med 2004 199 35 46 10.1084/jem.20030204 14707113
25. Genome sequence, comparative analysis and haplotype structure of the domestic dog. K Lindblad-Toh CM Wade TS Mikkelsen EK Karlsson DB Jaffe M Kamal M Clamp JL Chang EJ Kulbokas III MC Zody E Mauceli X Xie M Breen RK Wayne EA Ostrander CP Ponting F Galibert DR Smith PJ DeJong E Kirkness P Alvarez T Biagi W Brockman J Butler CW Chin A Cook J Cuff MJ Daly D DeCaprio S Gnerre M Grabherr M Kellis M Kleber C Bardeleben L Goodstadt A Heger C Hitte L Kim KP Koepfli HG Parker JP Pollinger SM Searle NB Sutter R Thomas C Webber J Baldwin A Abebe A Abouelleil L Aftuck M Ait-Zahra T Aldredge N Allen P An S Anderson C Antoine H Arachchi A Aslam L Ayotte P Bachantsang A Barry T Bayul M Benamara A Berlin D Bessette B Blitshteyn T Bloom J Blye L Boguslavskiy C Bonnet B Boukhgalter A Brown P Cahill N Calixte J Camarata Y Cheshatsang J Chu M Citroen A Collymore P Cooke T Dawoe R Daza K Decktor S DeGray N Dhargay K Dooley K Dooley P Dorje K Dorjee L Dorris N Duffey A Dupes O Egbiremolen R Elong J Falk A Farina S Faro D Ferguson P Ferreira S Fisher M FitzGerald K Foley C Foley A Franke D Friedrich D Gage M Garber G Gearin G Giannoukos T Goode A Goyette J Graham E Grandbois K Gyaltsen N Hafez D Hagopian B Hagos J Hall C Healy R Hegarty T Honan A Horn N Houde L Hughes L Hunnicutt M Husby B Jester C Jones A Kamat B Kanga C Kells D Khazanovich AC Kieu P Kisner M Kumar K Lance T Landers M Lara W Lee JP Leger N Lennon L Leuper S LeVine J Liu X Liu Y Lokyitsang T Lokyitsang A Lui J Macdonald J Major R Marabella K Maru C Matthews S McDonough T Mehta J Meldrim A Melnikov L Meneus A Mihalev T Mihova K Miller R Mittelman V Mlenga L Mulrain G Munson A Navidi J Naylor T Nguyen N Nguyen C Nguyen T Nguyen R Nicol N Norbu C Norbu N Novod T Nyima P Olandt B O'Neill K O'Neill S Osman L Oyono C Patti D Perrin P Phunkhang F Pierre M Priest A Rachupka S Raghuraman R Rameau V Ray C Raymond F Rege C Rise J Rogers P Rogov J Sahalie S Settipalli T Sharpe T Shea M Sheehan N Sherpa J Shi D Shih J Sloan C Smith T Sparrow J Stalker N Stange-Thomann S Stavropoulos C Stone S Stone S Sykes P Tchuinga P Tenzing S Tesfaye D Thoulutsang Y Thoulutsang K Topham I Topping T Tsamla H Vassiliev V Venkataraman A Vo T Wangchuk T Wangdi M Weiand J Wilkinson A Wilson S Yadav S Yang X Yang G Young Q Yu J Zainoun L Zembek A Zimmer ES Lander, Nature 2005 438 803 819 10.1038/nature04338 16341006
26. Minimal mutations are required to effect a radical change in function in CEA family members of the Ig superfamily. F Naghibalhossaini CP Stanners, J Cell Sci 2004 117 761 769 10.1242/jcs.00903 14734654
27. Parallel adaptive radiations in two major clades of placental mammals. O Madsen M Scally CJ Douady DJ Kao RW DeBry R Adkins HM Amrine MJ Stanhope WW de Jong MS Springer, Nature 2001 409 610 614 10.1038/35054544 11214318
28. Molecular phylogenetics and the origins of placental mammals. WJ Murphy E Eizirik WE Johnson YP Zhang OA Ryder SJ O'Brien, Nature 2001 409 614 618 10.1038/35054550 11214319
29. Intra- and interspecies analyses of the carcinoembryonic antigen (CEA) gene family reveal independent evolution in primates and rodents. F Rudert W Zimmermann JA Thompson, J Mol Evol 1989 29 126 134 10.1007/BF02100111 2509715
30. Estimation of divergence times from multiprotein sequences for a few mammalian species and several distantly related organisms. M Nei P Xu G Glazko, Proc Natl Acad Sci U S A 2001 98 2497 2502 11226267 10.1073/pnas.051611498
31. An abundant placental transcript containing an IAP-LTR is allelic to mouse pregnancy-specific glycoprotein 23 (Psg23): cloning and genetic analysis. M Ball A McLellan B Collins J Coadwell F Stewart T Moore, Gene 2004 325 103 113 10.1016/j.gene.2003.10.001 14697515
32. Structure and evolution of the mouse pregnancy-specific glycoprotein (Psg) gene locus. AS McLellan B Fischer G Dveksler T Hori F Wynne M Ball K Okumura T Moore W Zimmermann, BMC Genomics 2005 6 4 15647114 10.1186/1471-2164-6-4
33. The nature and expression of the rodent CEA families: evolutionary considerations. W Zimmermann, Cell adhesion and communication mediated by the CEA family Amsterdam, Harwood Academic Publishers, Stanners CP, 1998 31 55
34. Comparative aspects of trophoblast development and placentation. AM Carter AC Enders, Reprod Biol Endocrinol 2004 2 46 15236656 10.1186/1477-7827-2- 46
35. Immunology of placentation in eutherian mammals. A Moffett C Loke, Nat Rev Immunol 2006 6 584 594 10.1038/nri1897 16868549
36. Binding of pregnancy-specific glycoprotein 17 to CD9 on macrophages induces secretion of IL-10, IL-6, PGE2, and TGF-beta1. CT Ha R Waterhouse J Wessells JA Wu GS Dveksler, J Leukoc Biol 2005 77 948 957 10.1189/jlb.0804453 15772125
37. Crystal structure of murine sCEACAM1a[1,4]: a coronavirus receptor in the CEA family. K Tan BD Zelus R Meijers JH Liu JM Bergelson N Duke R Zhang A Joachimiak KV Holmes JH Wang, EMBO J 2002 21 2076 2086 11980704 10.1093/emboj/21.9.2076
38. A family of human lymphoid and myeloid Ig-like receptors, some of which bind to MHC class I molecules. L Borges ML Hsu N Fanger M Kubin D Cosman, J Immunol 1997 159 5192 5196 9548455
39. A new human gene complex encoding the killer cell inhibitory receptors and related monocyte/macrophage receptors. N Wagtmann S Rojo E Eichler H Mohrenweiser EO Long, Curr Biol 1997 7 615 618 10.1016/S0960-9822(06)00263-6 9259559
40. Cutting edge: expansion of the KIR locus by unequal crossing over. MP Martin A Bashirova J Traherne J Trowsdale M Carrington, J Immunol 2003 171 2192 2195 12928362
41. Concerted and birth-and-death evolution of multigene families. M Nei AP Rooney, Annu Rev Genet 2005 39 121 152 16285855 10.1146/annurev.genet.39.073003. 112240
42. The ITAM-bearing transmembrane adaptor DAP12 in lymphoid and myeloid cell function. LL Lanier AB Bakker, Immunol Today 2000 21 611 614 10.1016/S0167-5699(00)01745-X 11114420
43. Human diversity in killer cell inhibitory receptor genes. M Uhrberg NM Valiante BP Shum HG Shilling K Lienert-Weidenbach B Corliss D Tyan LL Lanier P Parham, Immunity 1997 7 753 763 10.1016/S1074-7613(00)80394-5 9430221
44. Direct recognition of cytomegalovirus by activating and inhibitory NK cell receptors. H Arase ES Mocarski AE Campbell AB Hill LL Lanier, Science 2002 296 1323 1326 10.1126/science.1070884 11950999
45. Discovery of Siglec-14, a novel sialic acid receptor undergoing concerted evolution with Siglec-5 in primates. T Angata T Hayakawa M Yamanaka A Varki M Nakamura, FASEB J 2006 20 1964 1973 10.1096/fj.06-5800com 17012248
46. Face off - the interplay between activating and inhibitory immune receptors. LL Lanier, Curr Opin Immunol 2001 13 326 331 10.1016/S0952-7915(00) 00222-3 11406364
47. Developement of monoclonal antibodies to canine T cell receptor complex (TCR/CD3) and their utilization in the diagnosis of T cell neoplasia. P Moore P Rossitto, Vet Pathol 1993 30 457 457
48. Minor histocompatibility antigens on canine hemopoietic progenitor cells. M Weber C Lange W Gunther M Franz E Kremmer HJ Kolb, J Immunol 2003 170 5861 5868 12794111
49. NCBI. 2007 http://www.ncbi.nlm.nih.gov/BLAST
50. Ensembl. 2007 http://www.ensembl.org/Multi/blastview
51. GenomeNet. 2007 http://clustalw.genome.ad.jp
52. Geno3D: automatic comparative molecular modelling of protein. C Combet M Jambon G Deleage C Geourjon, Bioinformatics 2002 18 213 214 10.1093/ bioinformatics/18.1.213 11836238
53. Sequence and structure-based prediction of eukaryotic protein phosphorylation sites. N Blom S Gammeltoft S Brunak, J Mol Biol 1999 294 1351 1362 10.1006/jmbi.1999.3310 10600390
54. FUGE bioinformatics platform. 2007 http://www.bioinfo.no/tools/kaks