CBF4 is a unique member of the CBF transcription factor family of Vitis vinifera and Vitis riparia

Plant, Cell and Environment

Volumn 31, Issue 1, 2008, Pages 1-10

  Xiao, Huogen ^a   Tattersall, Elizabeth A R ^b   Siddiqua, Mahbuba K ^a   Cramer, Grant R ^b   Nassuth, Annette ^a  

^a UNIVERSITY OF GUELPH   (Canada)

^b UNIVERSITY OF NEVADA   (United States)

Author keywords

Abiotic stress; DREB; Grape; Low temperature

Indexed keywords

SODIUM CHLORIDE; TRANSCRIPTION FACTOR; VEGETABLE PROTEIN; WATER;

DROUGHT RESISTANCE; DROUGHT STRESS; FREEZING; FRUIT; GENE EXPRESSION; LOW TEMPERATURE; PROTEIN; TOBACCO; TOLERANCE; VINE;

ACTIVE TRANSPORT; AMINO ACID SEQUENCE; ARTICLE; CHEMISTRY; CLASSIFICATION; COLD; DISASTER; DRUG EFFECT; GENE EXPRESSION REGULATION; GENETICS; GRAPE; METABOLISM; MOLECULAR GENETICS; MULTIGENE FAMILY; PHYSIOLOGY;

ACTIVE TRANSPORT, CELL NUCLEUS; AMINO ACID SEQUENCE; COLD; GENE EXPRESSION REGULATION, PLANT; MOLECULAR SEQUENCE DATA; MULTIGENE FAMILY; NATURAL DISASTERS; PLANT PROTEINS; SODIUM CHLORIDE; TRANSCRIPTION FACTORS; VITIS; WATER;

NICOTIANA TABACUM; VITACEAE; VITIS; VITIS RIPARIA; VITIS VINIFERA;

EID: 36749000592     PISSN: 01407791     EISSN: 13653040     Source Type: Journal    
DOI: 10.1111/j.1365-3040.2007.01741.x     Document Type: Article

References (53)

1. Al-daoud F. (2004) Evolution of the CBF/DREB1 gene family into different types. MSc thesis, University of Guelph, Guelph, Canada.
2. Alonso-Blanco C., Gomez-Mena C., Llorente F., Koornneef M., Salinas J. Martinez-Zapater J.M. (2005) Genetic and molecular analyses of natural variation indicate CBF2 as a candidate gene for underlying a freezing tolerance quantitative trait locus in Arabidopsis. Plant Physiology 139, 1304 1312.
3. Benedict C., Skinner J.S., Meng R., Chang Y., Bhalarao R., Finn C., Chen T.H.H. Hurry V. (2005) The role of the CBF-dependent signalling pathway in woody perennials. In Cold Hardiness in Plants: Molecular Genetics, Cell Biology and Physiology (eds T.H.H. Chen, M. Uemura S. Fujikawa pp. 167 180. CAB International, Oxon, UK.
4. Benedict C., Skinner J.S., Meng R., Chang Y., Bhalerao R., Huner N.P.A., Finn C.E., Chen T.H.H. Hurry V. (2006) The CBF1-dependent low temperature signalling pathway, regulon and increase in freeze tolerance are conserved in Populus spp. Plant, Cell & Environment 29, 1259 1272.
5. Cramer G.R., Ergül A., Grimplet J., et al 2007) Water and salinity stress in grapevines: early and late changes in transcript and metabolite profiles. Functional & Integrative Genomics 7, 111 134. doi: 10.1007/s10142-006-0039-y
6. Dubouzet J.G., Sakuma Y., Ito Y., Kasuga M., Dubouzet E.G., Miura S., Seki M., Shinozaki K. Yamaguchi-Shinozaki K. (2003) OsDREB genes in rice, Oryza sativa L., encode transcription activators that function in drought-, high salt-, and cold-responsive gene expression. Plant Journal 33, 751 763.
7. Flowers Y.J. Yeo A.R. (1995) Breeding for salinity resistance in crop plants: where next? Australian Journal of Plant Physiology 22, 875 884.
8. Francia E., Rizza F., Cattivelli L., Stanca A.M., Galiba G., Toth B., Hayes P.M., Skinner J.S. Pecchioni N. (2004) Two loci on chromosome 5H determine low-temperature tolerance in a 'Nure' (winter) × 'Tremois' (spring) barley map. Theoretical and Applied Genetics 108, 670 680.
9. Gao M.-J., Allard G., Byass L., Flanagan A.M. Singh J. (2002) Regulation and characterization of four CBF transcription factors from Brassica napus. Plant Molecular Biology 49, 459 471.
10. Gilmour S.J., Zarka D.G., Stockinger E.J., Salazar M.P., Houghton J.M. Thomashow M.F. (1998) Low temperature regulation of the Arabidopsis CBF family of AP2 transcriptional activators as an early step in cold-induced COR gene expression. Plant Journal 16, 433 442.
11. Gilmour S.J., Sebolt A.M., Salazar M.P., Everard J.D. Thomashow M.F. (2000) Overexpression of the Arabidopsis CBF3 transcriptional activator mimics multiple biochemical changes associated with cold acclimation. Plant Physiology 124, 1854 1865.
12. Goes da Silva F., Iandolino A., Al-Kayal F., et al 2005) Characterizing the grape transcriptome. Analysis of expressed sequence tags from multiple Vitis species and development of a compendium of gene expression during berry development. Plant Physiology 139, 574 597.
13. Haake V., Cook D., Riechmann J.L., Pineda O., Thomashow M.F. Zhang J.Z. (2002) Transcription factor CBF4 is a regulator of drought adaptation in Arabidopsis. Plant Physiology 130, 639 648.
14. Hong J.-P. Kim W.T. (2005) Isolation and functional characterization of the Ca-DREBLP1 gene encoding a dehydration-responsive element binding-factor-like protein 1 in hot pepper (Capsicum annuum L. cv. Pukang). Planta 220, 875 888.
15. Iliev E.A., Xu W., Polisensky D.H., Oh M., Torisky R.S., Clouse S.D. Braam J. (2002) Transcriptional and posttranscriptional regulation of Arabidopsis TCH4 expression by diverse stimuli. Roles of cis regions and brassinosteroids. Plant Physiology 130, 770 783.
16. Jaglo K.R., Kleff S., Amundsen K.L., Zhang X., Haake V., Zhang J.Z., Deits T. Thomashow M.F. (2001) Components of the Arabidopsis C-repeat/dehydration-responsive element binding factor cold-response pathway are conserved in Brassica napus and other plant species. Plant Physiology 127, 910 917.
17. Jaglo-Ottosen K.R., Gilmour S.J., Zarka D.G., Schabenberger O. Thomashow M.F. (1998) Arabidopsis CBF1 overexpression induces COR genes and enhances freezing tolerance. Science 280, 104 106.
18. Jefferson R.A. (1987) Assaying chimeric genes in plants: the GUS gene fusion system. Plant Molecular Biology Reporter 5, 387 405.
19. Kasuga M., Liu Q., Miura S., Yamaguchi-Shinozaki K. Shinozaki K. (1999) Improving plant drought, salt, and freezing tolerance by gene transfer of a single stress-inducible transcription factor. Nature Biotechnology 17, 287 291.
20. Kayal W.E., Navarro M., Marque G., Keller G., Marque C. Teulieres C. (2006) Expression profile of CBF-like transcriptional factor genes from Eucalyptus in response to cold. Journal of Experimental Botany 57, 2455 2469.
21. Liu Q., Kasuga M., Sakuma Y., Abe H., Miura S., Yamaguchi-Shinozaki K. Shinozaki K. (1998) Two transcription factors, DREB1 and DREB2, with an EREBP/AP2 DNA binding domain separate two cellular signal transduction pathways in drought- and low-temperature-responsive gene expression, respectively, in Arabidopsis. Plant Cell 10, 1391 1406.
22. Luu-The V., Paquet N., Calvo E. Cumps J. (2005) Improved real-time RT-PCR method for high-throughput measurements using second derivative calculation and double correction. Biotechniques 38, 287 293.
23. Maruyama K., Sakuma Y., Kasuga M., Ito Y., Seki M., Goda H., Shimada Y., Yoshida S., Shinozaki K. Yamaguchi-Shinozaki K. (2004) Identification of cold-inducible downstream genes of the Arabidopsis DREB1A/CBF3 transcriptional factor using two microarray systems. Plant Journal 38, 982 993.
24. Medina J., Bargues M., Terol J., Perez-Alonso M. Salinas J. (1999) The Arabidopsis CBF gene family is composed of three genes encoding AP2 domain-containing proteins whose expression is regulated by low temperature but not by abscisic acid or dehydration. Plant Physiology 119, 463 469.
25. m2 in Triticum monococcum. Molecular Genetics and Genomics 275, 193 203.
26. Nakashima K. Yamaguchi-Shinozaki K. (2006) Regulons involved in osmotic stress-responsive and cold stress-responsive gene expression in plants. Physiologia Plantarum 126, 62 71.
27. Nassuth A., Pollari E., Helmeczy K., Stewart S. Kofalvi S. (2000) Improved RNA extraction and one-tube RT-PCR assay for the simultaneous detection of control plant RNA plus several viruses in plant extracts. Journal of Virological Methods 90, 37 49.
28. Owens C.L., Thomashow M.F., Hancock J.F. Iezzoni A.F. (2002) CBF1 orthologs in sour cherry and strawberry and heterologous expression of CBF1 in strawberry. Journal of the American Society of Horticultural Sciences 127, 489 494.
29. Sakuma Y., Liu Q., Dubouzet J.G., Abe H., Shinozaki K. Yamaguchi-Shinozaki K. (2002) DNA-binding specificity of the ERF/AP2 domain of Arabidopsis DREBs, transcription factors involved in dehydration- and cold-inducible gene expression. Biochemical Biophysical Research Communications 290, 998 1009.
30. Savitch L.V., Allard G., Seki M., Robert L.S., Tinker N.A., Huner N.P.A., Shinozaki K. Singh J. (2005) The effect of overexpression of two Brassica CBF/DREB1-like transcription factors on photosynthetic capacity and freezing tolerance in Brassica napus. Plant and Cell Physiology 46, 1525 1539.
31. Shinwari Z.K., Nakashima K., Miura S., Kasuga M., Seki M., Yamaguchi-Shinozaki K. Shinozaki K. (1998) An Arabidopsis gene family encoding DRE/CRT binding proteins involved in low-temperature-responsive gene expression. Biochemical Biophysical Research Communications 250, 161 170.
32. Siddiqua M., Xiao H. Nassuth A. (2005) In silico analysis of three CBF genes from both V. riparia and V. vinifera. In Proceedings International Grape Genomics Symposium, St Louis, MO, USA (eds W. Qiu L.G. Kovacs pp. 105 112. St Louis, MO, USA.
33. Siddiqua M., Xiao H. Nassuth A. (2006) Promoter analysis of grape CBF genes. Acta Horticulturae, in press.
34. Skinner J.S., von Zitzewitz J., Szucs P., Marquez-Cedillo L., Filichkin T., Amundsen K., Stockinger E.J., Thomashow M.F., Chen T.N.N. Hayes P.M. (2005) Structural, functional, and phylogenetic characterization of a large CBF gene family in barley. Plant Molecular Biology 59, 533 551.
35. Steponkus P.L., Uemura M. Webb M.S. (1993) A contrast of the cryostability of the plasma membrane of winter rye and spring oat - two species that widely differ in their freezing tolerance and plasma membrane lipid composition. In Advances in Low-temperature Biology (ed. P.L. Steponkus pp. 211 312. JAI Press, London, England.
36. Stockinger E.J., Gilmour S.J. Thomashow M.F. (1997) Arabidopsis thaliana CBF1 encodes an AP2 domain-containing transcriptional activator that binds to the C-repeat/DRE, a cis-acting DNA regulatory element that stimulates transcription in response to low temperature and water deficit. Proceedings of the National Academy of Sciences of the United States of America 94, 1035 1040.
37. Tattersall E.A.R., Ergul A., Al-Kayal F., DeLuc L., Cushman J.C. Cramer G.R. (2005) Comparison of methods for isolating RNA from leaves of grapevine. American Journal of Enology and Viticulture 56, 400 407.
38. Tattersall E.A.R., Grimplet J., DeLuc L., et al 2007) Transcript abundance profiles reveal larger and more complex responses of grapevine to chilling compared to osmotic and salinity stress. Functional & Integrative Genomics 7, 317 333. doi: 10.1007/s10142-007-0051-x
39. Thomashow M.F. (1999) Plant cold acclimation: freezing tolerance genes and regulatory mechanisms. Annual Review of Plant Physiology and Plant Molecular Biology 50, 571 599.
40. Tondelli A., Francia E., Barabaschi D., Aprile A., Skinner J.S., Stockinger E.J., Stanca A.M. Pecchioni N. (2006) Mapping regulatory genes as candidates for cold and drought stress tolerance in barley. Theoretical and Applied Genetics 112, 445 454.
41. Triezenberg S.J. (1995) Strcuture and function of transcriptional activation domains. Current Opinion in Genetics & Development 5, 190 196.
42. Verslues P.E., Agarwal M., Katiyar-Agarwal S., Zhu J. Zhu J.-K. (2006) Methods and concepts in quantifying resistance to drought, salt and freezing, abiotic stresses that affect plant water status. Plant Journal 45, 523 539.
43. Vincent D., Ergül A., Bohlman M.C., et al 2007) Proteomic analysis reveals differences between Vitis vinifera L. cv. Chardonnay and cv. Cabernet Sauvignon and their responses to water deficit and salinity. Journal of Experimental Botany 58, 1873 1892. doi: 10.1093/jxb/erm012
44. Vogel J.T., Zarka D.G., Van Buskirk H.A., Fowler S.G. Thomasow M.F. (2005) Roles of the CBF2 and ZAT12 transcription factors in configuring the low temperature transcriptome of Arabidopsis. Plant Journal 41, 195 211.
45. Wang Z., Triezenberg S.J., Thomashow M.F. Stockinger E.J. (2005) Multiple hydrophobic motifs in Arabidopsis CBF1 COOH-terminus provide functional redundance in transactivation. Plant Molecular Biology 58, 543 559.
46. Winkler A.J. (1970) General Viticulture. University of California Press, San Diego, CA, USA.
47. Xiao H., Siddiqua M., Braybrook S. Nassuth A. (2006) Three grape CBF/DREB1 genes respond to low temperature, drought and ABA. Plant, Cell & Environment 29, 1410 1421.
48. Xue G.-P. (2003) The DNA-binding activity of an AP2 transcriptional activator HvCBF2 involved in regulation of low-temperature responsive genes in barley is modulated by temperature. Plant Journal 33, 373 383.
49. Yamaguchi-Shinozaki K. Shinozaki K. (1993) Characterization of the expression of a desiccation-responsive rd29 gene of Arabidopsis thaliana and analysis of its promoter in transgenic plants. Molecular and General Genetics 263, 331 340.
50. Yang Y., Li R. Qi M. (2000) In vivo analysis of plant promoters and transcription factors by agroinfiltration of tobacco leaves. Plant Journal 22, 543 551.
51. Zarka D.J., Vogel J.T., Cook D. Thomashow M.F. (2003) Cold induction of Arabidopsis CBF genes involves multiple ICE (Inducer of CBF Expression) promoter elements and a cold-regulatory circuit that is desensitized by low temperature. Plant Physiology 133, 910 918.
52. Zhang X., Fowler S.G., Cheng H., Lou Y., Rhee S.Y., Stockinger E.J. Thomashow M.F. (2004) Freezing-sensitive tomato has a functional CBF cold-response pathway, but a CBF regulon that differs from that of freezing-tolerant Arabidopsis. Plant Journal 39, 905 919.
53. Zhao T.-J., Sun S., Liu Y., Liu J.-M., Liu Q., Yan Y.-B Zhou H.-M. (2006) Regulating the drought-responsive element (DRE)-mediated signalling pathway by synergic functions of trans-active and trans-inactive DRE binding factors in Brassica napus. Journal of Biological Chemistry 281, 10752 10759.