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Volumn 73, Issue 22, 2007, Pages 7128-7137

Diversity analysis of dairy and nondairy Lactococcus lactis isolates, using a novel multilocus sequence analysis scheme and (GTG)5-PCR fingerprinting

Author keywords

[No Author keywords available]

Indexed keywords

DIVERSITY ANALYSIS; FINGERPRINTINGS; GENOMIC LINEAGES; GENOTYPE; PHENOTYPIC ANALYSES;

EID: 36649035092     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/AEM.01017-07     Document Type: Article
Times cited : (95)

References (40)
  • 1
    • 0035129116 scopus 로고    scopus 로고
    • Enhanced flavour formation by combination of selected lactococci from industrial and artisanal origin with focus on completion of a metabolic pathway
    • Ayad, E. H., A. Verheul, W. J. Engels, J. T. Wouters, and G. Smit. 2001. Enhanced flavour formation by combination of selected lactococci from industrial and artisanal origin with focus on completion of a metabolic pathway. J. Appl. Microbiol. 90:59-67.
    • (2001) J. Appl. Microbiol , vol.90 , pp. 59-67
    • Ayad, E.H.1    Verheul, A.2    Engels, W.J.3    Wouters, J.T.4    Smit, G.5
  • 2
    • 4544355315 scopus 로고    scopus 로고
    • Recent genetic transfer between Lactococcus lactis and enterobacteria
    • Bolotin, A., B. Quinquis, A. Sorokin, and D. S. Ehrlich. 2004. Recent genetic transfer between Lactococcus lactis and enterobacteria. J. Bacteriol. 186:6671-6677.
    • (2004) J. Bacteriol , vol.186 , pp. 6671-6677
    • Bolotin, A.1    Quinquis, B.2    Sorokin, A.3    Ehrlich, D.S.4
  • 6
    • 30744434114 scopus 로고    scopus 로고
    • Development of a multilocus sequence typing method for analysis of Lactobacillus plantarum strains
    • de Las Rivas, B., A. Marcobal, and R. Munoz. 2006. Development of a multilocus sequence typing method for analysis of Lactobacillus plantarum strains. Microbiology 152:85-93.
    • (2006) Microbiology , vol.152 , pp. 85-93
    • de Las Rivas, B.1    Marcobal, A.2    Munoz, R.3
  • 7
    • 0030746988 scopus 로고    scopus 로고
    • Strain-specific differentiation of lactococci in mixed starter culture populations using randomly amplified polymorphic DNA-derived probes
    • Erlandson, K., and C. A. Batt. 1997. Strain-specific differentiation of lactococci in mixed starter culture populations using randomly amplified polymorphic DNA-derived probes. Appl. Environ. Microbiol. 63:2702-2707.
    • (1997) Appl. Environ. Microbiol , vol.63 , pp. 2702-2707
    • Erlandson, K.1    Batt, C.A.2
  • 8
    • 0001552818 scopus 로고
    • Agar media for the isolation and enumeration of aroma bacteria in starters
    • Galesloot, T. E., I. Hassing, and J. Stadhouders. 1961. Agar media for the isolation and enumeration of aroma bacteria in starters. Neth. Milk Dairy J. 15:145-150.
    • (1961) Neth. Milk Dairy J , vol.15 , pp. 145-150
    • Galesloot, T.E.1    Hassing, I.2    Stadhouders, J.3
  • 9
    • 0020411490 scopus 로고    scopus 로고
    • Garvie, E., and J. Farrow. 1982. Streptococcus lactis subsp. cremoris (Orla-Jensen) comb. nov. and Streptococcus lactis subsp. diacetilactis (Matuszewski et al.) nom. rev., comb. nov. Int. J. Syst. Bacteriol. 32:453-455.
    • Garvie, E., and J. Farrow. 1982. Streptococcus lactis subsp. cremoris (Orla-Jensen) comb. nov. and Streptococcus lactis subsp. diacetilactis (Matuszewski et al.) nom. rev., comb. nov. Int. J. Syst. Bacteriol. 32:453-455.
  • 10
    • 0017839489 scopus 로고
    • Streptococcus raffinolactis (Orla-Jensen and Hansen): A group N streptococcus found in raw milk
    • Garvie, E. I. 1978. Streptococcus raffinolactis (Orla-Jensen and Hansen): a group N streptococcus found in raw milk. Int. J. Syst. Bacteriol. 28:190-193.
    • (1978) Int. J. Syst. Bacteriol , vol.28 , pp. 190-193
    • Garvie, E.I.1
  • 11
    • 0035960740 scopus 로고    scopus 로고
    • Applicability of rep-PCR fingerprinting for identification of Lactobacillus species
    • Gevers, D., G. Huys, and J. Swings. 2001. Applicability of rep-PCR fingerprinting for identification of Lactobacillus species. FEMS Microbiol. Lett. 205:31-36.
    • (2001) FEMS Microbiol. Lett , vol.205 , pp. 31-36
    • Gevers, D.1    Huys, G.2    Swings, J.3
  • 15
    • 0019506019 scopus 로고
    • Deoxyribonucleic acid homology among lactic streptococci
    • Jarvis, A. W., and B. D. Jarvis. 1981. Deoxyribonucleic acid homology among lactic streptococci. Appl. Environ. Microbiol. 41:77-83.
    • (1981) Appl. Environ. Microbiol , vol.41 , pp. 77-83
    • Jarvis, A.W.1    Jarvis, B.D.2
  • 16
    • 0036855287 scopus 로고    scopus 로고
    • Genotypic vs. phenotypic biodiversity in Lactococcus lactis
    • Kelly, W., and L. Ward. 2002 Genotypic vs. phenotypic biodiversity in Lactococcus lactis. Microbiology 148:3332-3333.
    • (2002) Microbiology , vol.148 , pp. 3332-3333
    • Kelly, W.1    Ward, L.2
  • 17
    • 0032497959 scopus 로고    scopus 로고
    • Characterization of lactococci isolated from minimally processed fresh fruit and vegetables
    • Kelly, W. J., G. P. Davey, and L. J. Ward. 1998. Characterization of lactococci isolated from minimally processed fresh fruit and vegetables. Int. J. Food Microbiol. 45:85-92.
    • (1998) Int. J. Food Microbiol , vol.45 , pp. 85-92
    • Kelly, W.J.1    Davey, G.P.2    Ward, L.J.3
  • 18
    • 0028877742 scopus 로고
    • Detection and characterization of lactose-utilizing Lactococcus spp. in natural ecosystems
    • Klijn, N., A. H. Weerkamp, and W. M. de Vos. 1995. Detection and characterization of lactose-utilizing Lactococcus spp. in natural ecosystems. Appl. Environ. Microbiol. 61:788-792.
    • (1995) Appl. Environ. Microbiol , vol.61 , pp. 788-792
    • Klijn, N.1    Weerkamp, A.H.2    de Vos, W.M.3
  • 20
    • 29244432526 scopus 로고    scopus 로고
    • Genome update: Lactic acid bacteria genome sequencing is booming
    • Liu, M., F. H. van Enckevort, and R. J. Siezen. 2005. Genome update: lactic acid bacteria genome sequencing is booming. Microbiology 151:3811-3814.
    • (2005) Microbiology , vol.151 , pp. 3811-3814
    • Liu, M.1    van Enckevort, F.H.2    Siezen, R.J.3
  • 22
    • 33750341148 scopus 로고    scopus 로고
    • Makarova, K., A. Slesarev, Y. Wolf, A. Sorokin, B. Mirkin, E. Koonin, A. Pavlov, N. Pavlova, V. Karamychev, N. Polouchine, V. Shakhova, I. Grigoriev, Y. Lou, D. Rohksar, S. Lucas, K. Huang, D. M. Goodstein, T. Hawkinse, V. Plengvidhya, D. Welker, J. Hughes, Y. Goh, A. Benson, K. Baldwin, J.-H. Lee, I. Díaz-Muñiz, B. Dosti, V. Smeianov, W. Wechter, R. Barabote, G. Lorca, E. Altermann, R. Barrangou, B. Ganesan, Y. Xie, H. Rawsthorne, D. Tamir, C. Parker, F. Breidt, J. Broadbent, R. Hutkins, D. O'Sullivan, J. Steele, G. Unlu, M. Saier, T. Klaenhammer, P. Richardson, S. Kozyavkin, B. Weimerd, and D. Mills. 2006. Comparative genomics of the lactic acid bacteria. Proc. Natl. Acad. Sci. USA 103:15611-15616.
    • Makarova, K., A. Slesarev, Y. Wolf, A. Sorokin, B. Mirkin, E. Koonin, A. Pavlov, N. Pavlova, V. Karamychev, N. Polouchine, V. Shakhova, I. Grigoriev, Y. Lou, D. Rohksar, S. Lucas, K. Huang, D. M. Goodstein, T. Hawkinse, V. Plengvidhya, D. Welker, J. Hughes, Y. Goh, A. Benson, K. Baldwin, J.-H. Lee, I. Díaz-Muñiz, B. Dosti, V. Smeianov, W. Wechter, R. Barabote, G. Lorca, E. Altermann, R. Barrangou, B. Ganesan, Y. Xie, H. Rawsthorne, D. Tamir, C. Parker, F. Breidt, J. Broadbent, R. Hutkins, D. O'Sullivan, J. Steele, G. Unlu, M. Saier, T. Klaenhammer, P. Richardson, S. Kozyavkin, B. Weimerd, and D. Mills. 2006. Comparative genomics of the lactic acid bacteria. Proc. Natl. Acad. Sci. USA 103:15611-15616.
  • 23
    • 0013097027 scopus 로고    scopus 로고
    • Genetic diversity among dairy lactococcal strains investigated by polymerase chain reaction with three arbitrary primers
    • Mangin, I., D. Corroler, A. Reinhardt, and M. Gueguen. 1999. Genetic diversity among dairy lactococcal strains investigated by polymerase chain reaction with three arbitrary primers. J. Appl. Microbiol. 86:514-520.
    • (1999) J. Appl. Microbiol , vol.86 , pp. 514-520
    • Mangin, I.1    Corroler, D.2    Reinhardt, A.3    Gueguen, M.4
  • 24
    • 4043084829 scopus 로고    scopus 로고
    • Phylogenetic analysis of Lactococcus lactis subspecies based on decoding the sequence of the pepT tripeptidase gene, the pepV dipeptidase gene and 16S rRNA
    • Mori, S., K. Mori, I. Suzuki, and T. Kasumi. 2004. Phylogenetic analysis of Lactococcus lactis subspecies based on decoding the sequence of the pepT tripeptidase gene, the pepV dipeptidase gene and 16S rRNA. Syst. Appl. Microbiol. 27:414-422.
    • (2004) Syst. Appl. Microbiol , vol.27 , pp. 414-422
    • Mori, S.1    Mori, K.2    Suzuki, I.3    Kasumi, T.4
  • 25
    • 0022507362 scopus 로고
    • Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions
    • Nei, M., and T. Gojobori. 1986. Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions. Mol. Biol. Evol. 3:418-426.
    • (1986) Mol. Biol. Evol , vol.3 , pp. 418-426
    • Nei, M.1    Gojobori, T.2
  • 26
    • 0000272294 scopus 로고
    • The hydrolysis of arginine by streptococci
    • Niven, C. F., K. L. Smiley, and J. M. Sherman. 1942. The hydrolysis of arginine by streptococci. J. Bacteriol. 43:651-660.
    • (1942) J. Bacteriol , vol.43 , pp. 651-660
    • Niven, C.F.1    Smiley, K.L.2    Sherman, J.M.3
  • 27
    • 33745967483 scopus 로고    scopus 로고
    • Phenotypic and molecular characterization of Lactococcus lactis from milk and plants
    • Nomura, M., M. Kobayashi, T. Narita, H. Kimoto-Nira, and T. Okamoto. 2006. Phenotypic and molecular characterization of Lactococcus lactis from milk and plants. J. Appl. Microbiol. 101:396-405.
    • (2006) J. Appl. Microbiol , vol.101 , pp. 396-405
    • Nomura, M.1    Kobayashi, M.2    Narita, T.3    Kimoto-Nira, H.4    Okamoto, T.5
  • 28
    • 0036372315 scopus 로고    scopus 로고
    • Integrated polymerase chain reaction-based procedures for the detection and identification of species and subspecies of the gram-positive bacterial genus Lactococcus
    • Pu, Z. Y., M. Dobos, G. K. Limsowtin, and I. B. Powell. 2002. Integrated polymerase chain reaction-based procedures for the detection and identification of species and subspecies of the gram-positive bacterial genus Lactococcus. J. Appl. Microbiol. 93:353-361.
    • (2002) J. Appl. Microbiol , vol.93 , pp. 353-361
    • Pu, Z.Y.1    Dobos, M.2    Limsowtin, G.K.3    Powell, I.B.4
  • 29
    • 36649002682 scopus 로고    scopus 로고
    • Rademaker, J. L. W., and F. J. deBruijn. 2004. Computer-assisted pattern analysis of electrophoretic fingerprints and database construction. Chapter 1.7.5, p. 1-50. In G. Kowalchuk, F. deBruijn, I. Head, A. Akkermans, and J. van. Elsas (ed.), Molecular microbial ecology manual, 2nd ed. Kluwer Academic Publishers, Dordrecht, The Netherlands.
    • Rademaker, J. L. W., and F. J. deBruijn. 2004. Computer-assisted pattern analysis of electrophoretic fingerprints and database construction. Chapter 1.7.5, p. 1-50. In G. Kowalchuk, F. deBruijn, I. Head, A. Akkermans, and J. van. Elsas (ed.), Molecular microbial ecology manual, 2nd ed. Kluwer Academic Publishers, Dordrecht, The Netherlands.
  • 30
    • 36649024840 scopus 로고    scopus 로고
    • Rademaker, J. L. W., F. J. Louws, J. Versalovic, and F. J. deBruijn. 2004. Characterization of the diversity of ecological important microbes by rep-PCR genomic fingerprinting. Chapter 5.3.2, p. 1-33. In G. Kowalchuk, F. deBruijn, I. Head, A. Akkermans, and J. van. Elsas (ed.), Molecular microbial ecology manual, 2nd ed. Kluwer Academic Publishers, Dordrecht, The Netherlands.
    • Rademaker, J. L. W., F. J. Louws, J. Versalovic, and F. J. deBruijn. 2004. Characterization of the diversity of ecological important microbes by rep-PCR genomic fingerprinting. Chapter 5.3.2, p. 1-33. In G. Kowalchuk, F. deBruijn, I. Head, A. Akkermans, and J. van. Elsas (ed.), Molecular microbial ecology manual, 2nd ed. Kluwer Academic Publishers, Dordrecht, The Netherlands.
  • 31
    • 0025810181 scopus 로고
    • Development and application of oligonucleotide probes for identification of Lactococcus lactis subsp. cremoris
    • Salama, M., W. Sandine, and S. Giovannoni. 1991. Development and application of oligonucleotide probes for identification of Lactococcus lactis subsp. cremoris. Appl. Environ. Microbiol. 57:1313-1318.
    • (1991) Appl. Environ. Microbiol , vol.57 , pp. 1313-1318
    • Salama, M.1    Sandine, W.2    Giovannoni, S.3
  • 32
    • 0027483014 scopus 로고
    • Isolation of Lactococcus lactis subsp. cremoris from nature by colony hybridization with rRNA probes
    • Salama, M. S., W. E. Sandine, and S. J. Giovannoni. 1993. Isolation of Lactococcus lactis subsp. cremoris from nature by colony hybridization with rRNA probes. Appl. Environ. Microbiol. 59:3941-3945.
    • (1993) Appl. Environ. Microbiol , vol.59 , pp. 3941-3945
    • Salama, M.S.1    Sandine, W.E.2    Giovannoni, S.J.3
  • 33
    • 0037312201 scopus 로고    scopus 로고
    • Development of a multilocus sequence typing method for analysis of Listeria monocytogenes clones
    • Salcedo, C., L. Arreaza, B. Alcala, L. de la Fuente, and J. A. Vazquez. 2003. Development of a multilocus sequence typing method for analysis of Listeria monocytogenes clones. J. Clin. Microbiol. 41:757-762.
    • (2003) J. Clin. Microbiol , vol.41 , pp. 757-762
    • Salcedo, C.1    Arreaza, L.2    Alcala, B.3    de la Fuente, L.4    Vazquez, J.A.5
  • 35
    • 23944493804 scopus 로고    scopus 로고
    • Flavour formation by lactic acid bacteria and biochemical flavour profiling of cheese products
    • Smit, G., B. A. Smit, and W. J. Engels. 2005. Flavour formation by lactic acid bacteria and biochemical flavour profiling of cheese products. FEMS Microbiol. Rev. 29:591-610.
    • (2005) FEMS Microbiol. Rev , vol.29 , pp. 591-610
    • Smit, G.1    Smit, B.A.2    Engels, W.J.3
  • 36
    • 0032446559 scopus 로고    scopus 로고
    • Molecular diversity and relationship within Lactococcus lactis, as revealed by randomly amplified polymorphic DNA (RAPD)
    • Tailliez, P., J. Tremblay, S. D. Ehrlich, and A. Chopin. 1998. Molecular diversity and relationship within Lactococcus lactis, as revealed by randomly amplified polymorphic DNA (RAPD). Syst. Appl. Microbiol. 21:530-538.
    • (1998) Syst. Appl. Microbiol , vol.21 , pp. 530-538
    • Tailliez, P.1    Tremblay, J.2    Ehrlich, S.D.3    Chopin, A.4
  • 37
    • 26644454381 scopus 로고    scopus 로고
    • Genotypic characterization of Salmonella by multilocus sequence typing, pulsed-field gel electrophoresis and amplified fragment length polymorphism
    • Torpdahl, M., M. N. Skov, D. Sandvang, and D. L. Baggesen. 2005. Genotypic characterization of Salmonella by multilocus sequence typing, pulsed-field gel electrophoresis and amplified fragment length polymorphism. J Microbiol. Methods 63:173-184.
    • (2005) J Microbiol. Methods , vol.63 , pp. 173-184
    • Torpdahl, M.1    Skov, M.N.2    Sandvang, D.3    Baggesen, D.L.4
  • 39
    • 0031661069 scopus 로고    scopus 로고
    • Two methods for the genetic differentiation of Lactococcus lactis ssp. lactis and cremoris based on differences in the 16S rRNA gene sequence
    • Ward, L. J., J. C. Brown, and G. P. Davey. 1998. Two methods for the genetic differentiation of Lactococcus lactis ssp. lactis and cremoris based on differences in the 16S rRNA gene sequence. FEMS Microbiol. Lett. 166:15-20.
    • (1998) FEMS Microbiol. Lett , vol.166 , pp. 15-20
    • Ward, L.J.1    Brown, J.C.2    Davey, G.P.3


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