FLP-mapping: A universal, cost-effective, and automatable method for gene mapping

Methods in Molecular Biology

Volumn 396, Issue , 2007, Pages 419-432

  Nairz, Knud ^a   Zipperlen, Peder ^a   Schneider, Manuel ^a  

^a NONE

Author keywords

Caenorhabditis elegans; Drosophila melanogaster; FLP mapper; Genetic mapping; InDels; Mapping software; Model organisms; Sequence polymorphisms

Indexed keywords

ANIMAL; ARTICLE; AUTOMATION; CAENORHABDITIS ELEGANS; CAPILLARY ELECTROPHORESIS; COST BENEFIT ANALYSIS; DROSOPHILA MELANOGASTER; GENETIC DATABASE; GENETICS; INTERNET; POLYMERASE CHAIN REACTION; SINGLE NUCLEOTIDE POLYMORPHISM;

ANIMALS; AUTOMATION; CAENORHABDITIS ELEGANS; COST-BENEFIT ANALYSIS; DATABASES, GENETIC; DROSOPHILA MELANOGASTER; ELECTROPHORESIS, CAPILLARY; INTERNET; POLYMERASE CHAIN REACTION; POLYMORPHISM, SINGLE NUCLEOTIDE;

CAENORHABDITIS ELEGANS; DROSOPHILA MELANOGASTER; EUKARYOTA;

EID: 36549063359     PISSN: 10643745     EISSN: None     Source Type: Book Series    
DOI: 10.1385/1-59745-515-6:419     Document Type: Article

References (9)

1. Sachidanandam, R., Weissman, D., Schmidt, S. C., et al. (2001) A map of human genome sequence variation containing 1.42 million single nucleotide polymorphisms. Nature 409, 928-933.
2. Weber, J. L., David, D., Heil, J., Fan, Y., Zhao, C., and Marth, G. (2002) Human diallelic insertion/deletion polymorphisms. Am. J. Hum. Genet. 71, 854-862.
3. Shen, Y. J., Jiang, H., Jin, J. P., et al. (2004) Development of genome-wide DNA polymorphism database for map-based cloning of rice genes. Plant Physiol. 135, 1198-1205.
4. Schmid, K. J., Sorensen, T. R., Stracke, R., et al. (2003) Large-scale identification and analysis of genome-wide single-nucleotide polymorphisms for mapping in Arabidopsis thaliana. Genome Res. 13, 1250-1257.
5. Syvanen, A. C. (2005) Toward genome-wide SNP genotyping. Nat. Genet. 37, S5-S10.
6. Nairz, K., Stocker, H., Schindelholz, B., and Hafen, E. (2002) High-resolution SNP mapping by denaturing HPLC. Proc. Natl. Acad. Sci. USA 99, 10, 575-10, 580.
7. Weissenbach, J. (1993) A second generation linkage map of the human genome based on highly informative microsatellite loci. Gene 135, 275-278.
8. Brownstein, M. J., Carpten, J. D., and Smith, J. R. (1996) Modulation of nontemplated nucleotide addition by Taq DNA polymerase: primer modifications that facilitate genotyping. Biotechniques 20, 1004-1010.
9. Zipperlen, P., Nairz, K., Rimann, I., et al. (2005) A universal method for automated gene mapping. Genome Biol. 6, R19.