메뉴 건너뛰기




Volumn 396, Issue , 2007, Pages 395-405

Variable number tandem repeat typing of bacteria

Author keywords

Bacteria; Epidemiology; Molecular typing; Outbreak; VNTR

Indexed keywords

PRIMER DNA;

EID: 36549051532     PISSN: 10643745     EISSN: None     Source Type: Book Series    
DOI: 10.1385/1-59745-515-6:395     Document Type: Article
Times cited : (18)

References (23)
  • 1
    • 22244459534 scopus 로고    scopus 로고
    • Multiple-locus variable number tandem repeats analysis for genetic fingerprinting of pathogenic bacteria
    • Lindstedt, B. A. (2005) Multiple-locus variable number tandem repeats analysis for genetic fingerprinting of pathogenic bacteria. Electrophoresis 26, 2567-2582.
    • (2005) Electrophoresis , vol.26 , pp. 2567-2582
    • Lindstedt, B.A.1
  • 2
    • 2942706116 scopus 로고    scopus 로고
    • Diversity in coding tandem repeats in related Neisseria spp
    • Jordan, P., Snyder, L. A., and Saunders, N. J. (2003) Diversity in coding tandem repeats in related Neisseria spp. BMC Microbiol. 3, 23.
    • (2003) BMC Microbiol , vol.3 , pp. 23
    • Jordan, P.1    Snyder, L.A.2    Saunders, N.J.3
  • 3
    • 0141707642 scopus 로고    scopus 로고
    • Experimentally revised repertoire of putative contingency loci in Neisseria meningitidis strain MC58: Evidence for a novel mechanism of phase variation
    • Martin, P., van de Ven, T., Mouchel, N., Jeffries, A. C., Hood, D. W., and Moxon, E. R. (2003) Experimentally revised repertoire of putative contingency loci in Neisseria meningitidis strain MC58: evidence for a novel mechanism of phase variation. Mol. Microbiol. 50, 245-257.
    • (2003) Mol. Microbiol , vol.50 , pp. 245-257
    • Martin, P.1    van de Ven, T.2    Mouchel, N.3    Jeffries, A.C.4    Hood, D.W.5    Moxon, E.R.6
  • 4
    • 8944247272 scopus 로고    scopus 로고
    • Capsule phase variation in Neisseria meningitidis serogroup B by slipped-strand mispairing in the polysia-lyltransferase gene (siaD): Correlation with bacterial invasion and the outbreak of meningococcal disease
    • Hammerschmidt, S., Muller, A., Sillmann, H., et al. (1996) Capsule phase variation in Neisseria meningitidis serogroup B by slipped-strand mispairing in the polysia-lyltransferase gene (siaD): Correlation with bacterial invasion and the outbreak of meningococcal disease. Mol. Microbiol. 20, 1211-1220.
    • (1996) Mol. Microbiol , vol.20 , pp. 1211-1220
    • Hammerschmidt, S.1    Muller, A.2    Sillmann, H.3
  • 5
    • 0033808772 scopus 로고    scopus 로고
    • Lipoprotein(a), atherosclerosis, and apolipoprotein(a) gene polymorphism
    • Pati, U. and Pati, N. (2000) Lipoprotein(a), atherosclerosis, and apolipoprotein(a) gene polymorphism. MoI. Genet. Metab. 71, 87-92.
    • (2000) MoI. Genet. Metab , vol.71 , pp. 87-92
    • Pati, U.1    Pati, N.2
  • 6
    • 0031855733 scopus 로고    scopus 로고
    • Lack of consistent short sequence repeat polymorphisms in genetically homologous colonizing and invasive Candida albicans strains
    • Lunel, F. V., Licciardello, L., Stefani, S., et al. (1998) Lack of consistent short sequence repeat polymorphisms in genetically homologous colonizing and invasive Candida albicans strains. J. Bacteriol. 180, 3771-3778.
    • (1998) J. Bacteriol , vol.180 , pp. 3771-3778
    • Lunel, F.V.1    Licciardello, L.2    Stefani, S.3
  • 7
    • 0034870236 scopus 로고    scopus 로고
    • A highly polymorphic degenerate microsatellite for molecular strain typing of Candida krusei
    • Shemer, R., Weissman, Z., Hashman, N., and Kornitzer, D. (2001) A highly polymorphic degenerate microsatellite for molecular strain typing of Candida krusei. Microbiology 147, 2021-2028.
    • (2001) Microbiology , vol.147 , pp. 2021-2028
    • Shemer, R.1    Weissman, Z.2    Hashman, N.3    Kornitzer, D.4
  • 8
    • 0036708335 scopus 로고    scopus 로고
    • Practical approach for typing strains of Leishmania infantum by microsatellite analysis
    • Bulle, B., Milion, L., Bart, J. M., et al. (2002) Practical approach for typing strains of Leishmania infantum by microsatellite analysis. J. Clin. Microbiol. 40, 3391-3397.
    • (2002) J. Clin. Microbiol , vol.40 , pp. 3391-3397
    • Bulle, B.1    Milion, L.2    Bart, J.M.3
  • 9
    • 0035169029 scopus 로고    scopus 로고
    • Simple sequence repeat markers distinguish among morphotypes of Sphaeropsis sapinea
    • Burgess, T., Wingfield, M. J., and Wingfield, B. W. (2001) Simple sequence repeat markers distinguish among morphotypes of Sphaeropsis sapinea. Appl. Environ. Microbiol. 67, 354-362.
    • (2001) Appl. Environ. Microbiol , vol.67 , pp. 354-362
    • Burgess, T.1    Wingfield, M.J.2    Wingfield, B.W.3
  • 10
    • 18744374585 scopus 로고    scopus 로고
    • Diversity among French Bacillus anthracis isolates
    • Fouet, A., Smith, K. L., Keys, C., et al. (2002) Diversity among French Bacillus anthracis isolates. J. Clin. Microbiol. 40, 4732-4734.
    • (2002) J. Clin. Microbiol , vol.40 , pp. 4732-4734
    • Fouet, A.1    Smith, K.L.2    Keys, C.3
  • 11
    • 0034830315 scopus 로고    scopus 로고
    • Identification and characterization of variable-number tandem repeats in the Yersinia pestis genome
    • Klevytska, A. M., Price, L. B., Schupp, J. M., Worsham, P. L., Wong, J., and Keim, P. (2001) Identification and characterization of variable-number tandem repeats in the Yersinia pestis genome. J. Clin. Microbiol. 39, 3179-3185.
    • (2001) J. Clin. Microbiol , vol.39 , pp. 3179-3185
    • Klevytska, A.M.1    Price, L.B.2    Schupp, J.M.3    Worsham, P.L.4    Wong, J.5    Keim, P.6
  • 12
    • 0036180137 scopus 로고    scopus 로고
    • Discrimination of Mycobacterium tuberculosis complex bacteria using novel VNTR-PCR targets
    • Skuce, R. A., McCorry, T. P., McCarroll, J. F., et al. (2002) Discrimination of Mycobacterium tuberculosis complex bacteria using novel VNTR-PCR targets. Microbiology 148, 519-528.
    • (2002) Microbiology , vol.148 , pp. 519-528
    • Skuce, R.A.1    McCorry, T.P.2    McCarroll, J.F.3
  • 14
    • 0034830991 scopus 로고    scopus 로고
    • Extensive allelic variation among Francisella tularensis strains in a short-sequence tandem repeat region
    • Johansson, A., Goransson, I., Larsson, P., and Sjostedt, A. (2001) Extensive allelic variation among Francisella tularensis strains in a short-sequence tandem repeat region. J. Clin. Microbiol. 39, 3140-3146.
    • (2001) J. Clin. Microbiol , vol.39 , pp. 3140-3146
    • Johansson, A.1    Goransson, I.2    Larsson, P.3    Sjostedt, A.4
  • 16
    • 4844223197 scopus 로고    scopus 로고
    • Tandem repeats analysis for the high resolution phylogenetic analysis of Yersinia pestis
    • Pourcel, C., Andre-Mazeaud, F., Neubauer, H., Ramisse, F., and Vergnaud, G. (2004) Tandem repeats analysis for the high resolution phylogenetic analysis of Yersinia pestis. BMC Microbiol. 4, 22.
    • (2004) BMC Microbiol , vol.4 , pp. 22
    • Pourcel, C.1    Andre-Mazeaud, F.2    Neubauer, H.3    Ramisse, F.4    Vergnaud, G.5
  • 17
    • 12444304190 scopus 로고    scopus 로고
    • New method for typing Staphylococcus aureus strains: Multiple-locus variable-number tandem repeat analysis of polymorphism and genetic relationships of clinical isolates
    • Sabat, A., Krzyszton-Russjan, J., Strzalka, W., et al. (2003) New method for typing Staphylococcus aureus strains: multiple-locus variable-number tandem repeat analysis of polymorphism and genetic relationships of clinical isolates. J. Clin. Microbiol. 41, 1801-1804.
    • (2003) J. Clin. Microbiol , vol.41 , pp. 1801-1804
    • Sabat, A.1    Krzyszton-Russjan, J.2    Strzalka, W.3
  • 18
    • 0037387157 scopus 로고    scopus 로고
    • DNA fingerprinting of Salmonella enterica subsp. enterica serovars Typhimurium and Enteritidis with emphasis on phage type DT104 based on variable number tandem repeat loci
    • Lindstedt, B. A., Heir, E., Gjernes, E., and Kapperud, G. (2003) DNA fingerprinting of Salmonella enterica subsp. enterica serovars Typhimurium and Enteritidis with emphasis on phage type DT104 based on variable number tandem repeat loci. J. Clin. Microbiol. 41, 1469-1479.
    • (2003) J. Clin. Microbiol , vol.41 , pp. 1469-1479
    • Lindstedt, B.A.1    Heir, E.2    Gjernes, E.3    Kapperud, G.4
  • 19
    • 3042565250 scopus 로고    scopus 로고
    • DNA fingerprinting of Shiga-toxin producing Escherichia coli 0157 based on multiplelocus variable-number tandem-repeats analysis (MLVA)
    • Lindstedt, B. A., Heir, E., Gjernes, E., Vardund, T., and Kapperud, G. (2003) DNA fingerprinting of Shiga-toxin producing Escherichia coli 0157 based on multiplelocus variable-number tandem-repeats analysis (MLVA). Ann. Clin. Microbiol. Antimicrob. 2, 12.
    • (2003) Ann. Clin. Microbiol. Antimicrob , vol.2 , pp. 12
    • Lindstedt, B.A.1    Heir, E.2    Gjernes, E.3    Vardund, T.4    Kapperud, G.5
  • 20
    • 16844373563 scopus 로고    scopus 로고
    • Use of variable-number tandem repeats to examine genetic diversity of Neisseria meningitidis
    • Yazdankhah, S. P., Lindstedt, B. A., and Caugant, D. A. (2005) Use of variable-number tandem repeats to examine genetic diversity of Neisseria meningitidis. J. Clin. Microbiol. 43, 1699-1705.
    • (2005) J. Clin. Microbiol , vol.43 , pp. 1699-1705
    • Yazdankhah, S.P.1    Lindstedt, B.A.2    Caugant, D.A.3
  • 21
    • 24744436850 scopus 로고    scopus 로고
    • Variable-number tandem repeat analysis of meningococcal isolates belonging to the sequence type 162 complex
    • Yazdankhah, S. P., Kesanopoulos, K., Tzanakaki, G., Kremastinou, J., and Caugant, D. A. (2005) Variable-number tandem repeat analysis of meningococcal isolates belonging to the sequence type 162 complex. J. Clin. Microbiol. 43, 4865-4867.
    • (2005) J. Clin. Microbiol , vol.43 , pp. 4865-4867
    • Yazdankhah, S.P.1    Kesanopoulos, K.2    Tzanakaki, G.3    Kremastinou, J.4    Caugant, D.A.5
  • 22
    • 0033555906 scopus 로고    scopus 로고
    • Tandem repeats finder: A program to analyze DNA sequences
    • Benson, G. (1999) Tandem repeats finder: a program to analyze DNA sequences. Nucleic Acids Res. 27, 573-580.
    • (1999) Nucleic Acids Res , vol.27 , pp. 573-580
    • Benson, G.1
  • 23
    • 2942542734 scopus 로고    scopus 로고
    • Identification of polymorphic tandem repeats by direct comparison of genome sequence from different bacterial strains: A web-based resource
    • Denoeud, F. and Vergnaud, G. (2004) Identification of polymorphic tandem repeats by direct comparison of genome sequence from different bacterial strains: a web-based resource. BMC Bioinformatics 5, 4.
    • (2004) BMC Bioinformatics , vol.5 , pp. 4
    • Denoeud, F.1    Vergnaud, G.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.