Gene expression changes and early events in cotton fibre development

Annals of Botany

Volumn 100, Issue 7, 2007, Pages 1391-1401

  Lee, Jinsuk J ^a   Woodward, Andrew W ^a   Chen, Z Jeffrey ^a  

^a UNIVERSITY OF TEXAS AT AUSTIN   (United States)

Author keywords

Auxin; Cotton; Fibre; Gene expression; Gibberellin; Gossypium; Ovule; Phytohormone; Polyploid; Trichome

Indexed keywords

PHYTOHORMONE;

COTTON; GENE EXPRESSION; GENOMICS; HORMONE; SHRUB; TRICHOME;

BIOLOGICAL MODEL; COTTON; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION; GENETICS; GROWTH, DEVELOPMENT AND AGING; METABOLISM; REVIEW;

COTTON FIBER; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION, DEVELOPMENTAL; GENE EXPRESSION REGULATION, PLANT; GOSSYPIUM; MODELS, BIOLOGICAL; PLANT GROWTH REGULATORS;

ARABIDOPSIS; GOSSYPIUM; GOSSYPIUM HIRSUTUM; NICOTIANA TABACUM;

EID: 36448974919     PISSN: 03057364     EISSN: 10958290     Source Type: Journal    
DOI: 10.1093/aob/mcm232     Document Type: Review

References (82)

1. Applequist WL, Cronn R, Wendel JF. 2001. Comparative development of fiber in wild and cultivated cotton. Evolution and Development 3: 3-17.
2. Arpat AB, Waugh M, Sullivan JP, Gonzales M, Frisch D, Main D, et al. 2004. Functional genomics of cell elongation in developing cotton fibers. Plant Molecular Biology 54: 911-929.
3. Basra A, Malik CP. 1984. Development of the cotton fiber. International Review of Cytology 89: 65-113.
4. Beasley CA. 1971. In vitro culture of fertilized cotton ovules. BioScience 21: 906-907.
5. Beasley CA, Ting IP. 1974. The effects of plant growth substances on in vitro fiber development from unfertilized cotton ovules. American Journal of Botany 61: 188-194.
6. Chen JG, Du XM, Zhao HY, Zhou X. 1996. Fluctuation in levels of endogenous plant hormones in ovules of normal and mutant cotton during flowering and their relation to fiber development. Journal of Plant Growth Regulation 15: 173-177.
7. Chen JG, Du XM, Zhou X, Zhao HY. 1997. Levels of cytokinins in the ovules of cotton mutants with altered fiber development. Journal of Plant Growth Regulation 16: 181-185.
8. Chen JG, Ullah H, Young JC, Sussman MR, Jones AM. 2001. ABP1 is required for organized cell elongation and division in Arabidopsis embryogenesis. Genes and Development 15: 902-911.
9. Davis LA, Addicott FT. 1972. Abscisic acid: correlations with abscission and with development in the cotton fruit. Plant Physiology 49: 644-648.
10. Desai A, Chee PW, Rong J, May OL, Paterson AH. 2006. Chromosome structural changes in diploid and tetraploid A genomes of Gossypium. Genome 49: 336-345.
11. Durso Na, Cyr RJ. 1994. Beyond translation: elongation factor-1-alpha and the cytoskeleton. Protoplasma 180: 99-105.
12. Esch JJ, Chen M, Sanders M, Hillestad M, Ndkium S, Idelkope B, et al. 2003. A contradictory GLABRA3 allele helps define gene interactions controlling trichome development in Arabidopsis. Development 130: 5885-5894.
13. Gialvalis S, Seagull RW. 2001. Plant hormones alter fiber initiation in unfertilized cultured ovules of Gossypium hirsutum. Journal of Cotton Science 5: 252-258.
14. Gokani SJ, Thaker VS. 2002. Role of gibberellic acid in cotton fibre development. Journal of Agricultural Science 138: 255-260.
15. Gokani SJ, Kumar R, Thaker VS. 1998. Potential role of abscisic acid in cotton fiber and ovule development. Journal of Plant Growth Regulation 17: 1-5.
16. Graves DA, Stewart JM. 1988. Chronology of the differentiation of cotton (Gossypium hirsutum L. fiber cells. Planta 175: 254-258.
17. Guinn G, 1976. Water deficit and ethylene evolution by young cotton bolls. Plant Physiology 57: 403-405.
18. Guinn G, 1982. Fruit age and changes in abscisic acid content, ethylene production, and abscission rate of cotton fruits. Plant Physiology 69: 349-352.
19. Guinn G, Brummett DL. 1988. Changes in abscisic acid and indoleacetic acid before and after anthesis relative to changes in abscission rates of cotton fruiting forms. Plant Physiology 87: 629-631.
20. Haigler CH, Zhang DH, Wilkerson CG. 2005. Biotechnological improvement of cotton fibre maturity. Physiologia Plantarum 124: 285-294.
21. Hendrix B, Stewart JM. 2005. Estimation of the nuclear DNA content of Gossypium species. Annals of Botany 95: 789-797.
22. Hendrix DL. 1990. Carbohydrates and carbohydrate-enzymes in developing cotton ovules. Physiologia Plantarum 78: 85-92.
23. Humphries JA, Walker AR, Timmis JN, Orford SJ. 2005. Two WD-repeat genes from cotton are functional homologues of the Arabidopsis thaliana TRANSPARENT TESTA GLABRA1 (TTG1) gene. Plant Molecular Biology 57: 67-81.
24. Hülskamp M. 2004. Plant trichomes: a model for cell differentiation. Nature Reviews. Molecular Cell Biology 5: 471-480.
25. Hülskamp M, Schnittger AT. 1998. Spatial regulation of trichome formation in Arabidopsis thaliana. Seminars in Cell and Developmental Biology 9: 213-220.
26. Hülskamp M, Misera S, Jurgens G. 1994. Genetic dissection of trichome cell development in Arabidopsis. Cell 76: 555-566.
27. Ji SJ, Lu YC, Feng JX, Wei G, Li J, Shi YH, et al. 2003. Isolation and analyses of gene preferentially expressed during early cotton fiber development by subtractive PCR and cDNA array. Nucleic Acids Research 31: 2534-2543.
28. John ME. 1996. Structural characterization of genes corresponding to cotton fiber mRNA, E6: reduced E6 protein in transgenic plants by antisense gene. Plant Molecular Biology 30: 297-306.
29. John ME, Crow LJ. 1992. Gene expression in cotton (Gossypium hirsutum L.) fiber: cloning of the mRNAs. Proceedings of the National Academy of Sciences of the USA 89: 5769-5773.
30. Kim HJ, Triplett BA. 2001. Cotton fiber growth in planta and in vitro: models for plant cell elongation and cell wall biogenesis. Plant Physiology 127: 1361-1366.
31. Kim HJ, Triplett BA. 2004. Characterization of GhRac1 GTPase expressed in developing cotton (Gossypium hirsutum L.) fibers. Biochimica et Biophysica Acta 1679: 214-221.
32. Kim HJ, Pesacreta TC, Triplett BA. 2004. Cotton-fiber germin-like protein. II. Immunolocalization, purification, and functional analysis. Planta 218: 525-535.
33. Larkin JC, Oppenheimer DG, Pollock S, Marks MD. 1993. Arabidopsis GLABROUS1 gene requires downstream sequences for function. The Plant Cell 5: 1739-1748.
34. Larkin JC, Oppenheimer DG, Lloyd AM, Paparozzi ET, Marks MD. 1994. Roles of the GLABROUS1 and TRANSPARENT TESTA GLABRA genes in Arabidopsis trichome development. The Plant Cell 6: 1065-1076.
35. Lee JJ, Hassan OSS, Gao W, Wang J, Wei EN, Russel JK, et al. 2006. Developmental and gene expression analyses of a cotton naked seed mutant. Planta 223: 418-432.
36. Li CH, Zhu YP, Meng YL, Wang JW, Xu KX, Zhang TZ, et al. 2002. Isolation of genes preferentially expressed in cotton fibers by cDNA filter arrays and RT-PCR. Plant Science 163: 1113-1120.
37. Li XB, Fan XP, Wang XL, Cai L, Yang WC. 2005. The cotton ACTIN1 gene is functionally expressed in fibers and participates in fiber elongation. The Plant Cell 17: 859-875.
38. Loguercio LL, Zhang JQ, Wilkins TA. 1999. Differential regulation of six novel MYB-domian genes defines two distinct expression patterns in allotetraploid cotton (Gossypium hirsutum L.). Molecular and General Genetics 261: 660-671.
39. Lolle SJ, Cheung AY, Sussex IM. 1992. Fiddlehead: an Arabidopsis mutant constitutively expressing an organ fusion program that involves interactions between epidermal cells. Developmental Biology 152: 383-392.
40. Marks MD. 1997. Molecular genetic analysis of trichome development in Arabidopsis. Annual Review of Plant Physiology and Plant Molecular Biology 48: 137-163.
41. Notle KD, Hendrix DL, Radin JW, Koch KE. 1995. Sucrose synthase localization during initiation of seed development and trichome differentiation in cotton ovules. Plant Physiology 109: 1285-1293.
42. Payne T, Clement J, Arnold D, Lloyd A. 1999. Heterologous myb genes distinct from GL1 enhance trichome production when overexpressed in Nicotiana tabacum. Development 126: 671-682.
43. Percival AE, Wendel JF, Stewart JM. 1999. Taxonomy and germplasm resources. In: Smith CW, Cothren JT, eds. Cotton: origin, history, technology, and production. New York, NY: John Wiley & Sons, 33-63.
44. Pesch M, Hülskamp M. 2004. Creating a two-dimensional pattern de novo during Arabidopsis trichome and root hair initiation. Current Opinion in Genetics & Development 14: 422-427.
45. Preuss ML, Kovar DR, Lee YR, Staiger CJ, Delmer DP, Liu B 2004. A plant-specific kinesin binds to actin microfilaments and interacts with cortical microtubules in cotton fibers. Plant Physiology 136: 3945-3955.
46. Pruitt RE, Vielle-Calzada JP, Ploense SE, Grossniklaus U, Lolle SJ. 2000. FIDDLEHEAD, a gene required to suppress epidermal cell interactions in Arabidopsis, encodes a putative lipid biosynthetic enzyme. Proceedings of the National Academy of Sciences of the USA 97: 1311-1316.
47. Qin YM, Pujol FM, Hu CY, Feng JX, Kastaniotis AJ, Hiltunen JK, et al. 2007. Genetic and biochemical studies in yeast reveal that the cotton fibre-specific GhCER6 gene functions in fatty acid elongation. Journal of Experimental Botany 58: 473-481.
48. Rerie WG, Feldmann KA, Marks MD. 1994. The GLABRA2 gene encodes a homeo domain protein required for normal trichome development in Arabidopsis. Genes & Development 8: 1388-1399.
49. Ruan YL, Chourey PS. 1998. A fiberless seed mutation in cotton is associated with lack of fiber cell initiation in ovule epidermis and alterations in sucrose synthase expression and carbon partitioning in developing seeds. Plant Physiology 118: 399-406.
50. Ruan Y, Llewellyn D, Furbank R. 2001. The control of single-celled cotton fiber elongation by developmentally reversible gating of plasmodesmata and coordinated expression of sucrose and k(+) transporters and expansin. The Plant Cell 13: 47-60.
51. Ruan YL, Llewellyn DJ, Furbank RT. 2003. Suppression of sucrose synthase gene expression represses cotton fiber cell initiation, elongation, and seed development. The Plant Cell 15: 952-964.
52. Ruan YL, Xu SM, White R, Furbank RT. 2004. Genotypic and developmental evidence for the role of plasmodesmatal regulation in cotton fiber elongation mediated by callose turnover. Plant Physiology 136: 4104-4113.
53. Schellmann S, Hülskamp M. 2005. Epidermal differentiation: trichomes in Arabidopsis as a model system. International Journal of Developmental Biology 49: 579-584.
54. Schellmann S, Schnittger A, Kirik V, Wada T, Okada K, Beermann A, et al. 2002. TRIPTYCHON and CAPRICE mediate lateral inhibition during trichome and root hair patterning in Arabidopsis. EMBO Journal 21: 5036-5046.
55. Serna L, Martin C. 2006. Trichomes: different regulatory networks lead to convergent structures. Trends in Plant Science 11: 274-280.
56. Shi YH, Zhu SW, Mao XZ, Feng JX, Qin YM, Zhang L, et al. 2006. Transcriptome profiling, molecular, biological, and physiological studies reveal a major role for ethylene in cotton fiber cell elongation. The Plant Cell 18: 651-664.
57. Shindy WW, Smith OE. 1975. Identification of plant hormones from cotton ovules. Plant Physiology 55: 550-554.
58. Smith CW, Cothren JT. 1999. Cotton: origin, history, technology, and production. New York, NY: John Wiley & Sons.
59. Sun Y, Allen RD. 2005. Functional analysis of the BIN2 genes of cotton. Molecular Genetics and Genomics 274: 51-59.
60. Sun Y, Fokar M, Asami T, Yoshida S, Allen RD. 2004. Characterization of the brassinosteroid insensitive 1 genes of cotton. Plant Molecular Biology 54: 221-232.
61. Sun Y, Veerabomma S, Abdel-Mageed HA, Fokar M, Asami T, Yoshida S, et al. 2005. Brassinosteroid regulates fiber development on cultured cotton ovules. Plant Cell Physiology 46: 1384-1391.
62. Suo J, Liang X, Pu L, Zhang Y, Xue Y. 2003. Identification of GhMYB109 encoding a R2R3 MYB transcription factor that expressed specifically in fiber initials and elongating fibers of cotton (Gossypium hirsutum L.). Biochimica et Biophysica Acta 1630: 25-34.
63. Suttle JC, Hultstrand JF. 1991. Ethylene-induced leaf abscission in cotton seedlings: the physiological bases for age-dependent differences in sensitivity. Plant Physiology 95: 29-33.
64. Szymanski DB, Marks MD. 1998. GLABROUS1 overexpression and TRIPTYCHON alter the cell cycle and trichome cell fate in Arabidopsis. The Plant Cell 10: 2047-2062.
65. Szymanski DB, Lloyd AM, Marks MD. 2000. Progress in the molecular genetic analysis of trichome initiation and morphogenesis in Arabidopsis. Trends in Plant Science 5: 214-219.
66. Taliercio EW, Boykin D. 2007. Analysis of gene expression in cotton fiber initials. BMC Plant Biology 7: 22.
67. Taliercio E, Hendrix B, Stewart JM. 2005. DNA content and expression of genes related to cell cycling in developing Gossypium hirsutum (Malvaceae) fibers. American Journal of Botany 92: 1942-1947.
68. Tiwari SC, Wilkins TA. 1995. Cotton (Gossypium hirsutum) seed trichomes expand via diffuse growing mechanism. Canadian Journal of Botany 73: 746-757.
69. Van't Hof J. 1999. Increased nuclear DNA content in developing cotton fiber cells. American Journal of Botany 86: 776-779.
70. Wang HY, Yu Y, Chen ZL, Xia GX. 2005. Functional characterization of Gossypium hirsutum profilin 1 gene (GhPFN1. in tobacco suspension cells: characterization of in vivo functions of a cotton profilin gene. Planta 222: 594-603.
71. Wang S, Wang JW, Yu N, Li CH, Luo B, Gou JY, et al. 2004. Control of plant trichome development by a cotton fiber MYB gene. The Plant Cell 16: 2323-2334.
72. Wendel JF. 1989. New World tetraploid cottons contain Old World cytoplasm. Proceedings of the National Academy of Sciences of the USA 86: 4132-4136.
73. Wendel JF, Cronn RC. 2003. Polyploidy and the evolutionary history of cotton. Advances in Agronomy 78: 139-186.
74. Wilkins TA, Jernstedt JA. 1999. Molecular genetics of developing cotton fibers. In: Basra AM, ed. Cotton fibers. New York, NY: Hawthorne Press, 231-267.
75. Wu Y, Machado AC, White RG, Llewellyn DJ, Dennis ES. 2006. Expression profiling identifies genes expressed early during lint fibre initiation in cotton. Plant Cell Physiology 47: 107-127.
76. Wu Y, Llewellyn DJ, White R, Ruggiero K, Al-Ghazi Y, Dennis ES. 2007. Laser capture microdissection and cDNA microarrays used to generate gene expression profiles of the rapidly expanding fibre initial cells on the surface of cotton ovules. Planta 226: 1475-1490.
77. Wu YT, Liu JY. 2005. Molecular cloning and characterization of a cotton glucuronosyltranferase gene. Journal of Plant Physiology 162: 573-582.
78. Xu WL, Wang XL, Wang H, Li XB. 2007. Molecular characterization and expression analysis of nine cotton GhEF1A genes encoding translation elongation factor 1A. Gene 389: 27-35.
79. Yang SS, Cheung F, Lee JJ, Ha M, Wei NE, Sze SH, et al. 2006. Accumulation of genome-specific transcripts, transcription factors and phytohormonal regulators during early stages of fiber cell development in allotetraploid cotton. The Plant Journal 47: 761-775.
80. Yang YM, Xu CN, Wang BM, Jia JZ. 2001. Effects of plant growth regulators on secondary wall thickening of cotton fibres. Plant Growth Regulation 35: 233-237.
81. Yephremov A, Wisman E, Huijser P, Huijser C, Wellesen K, Saedler H. 1999. Characterization of the FIDDLEHEAD gene of Arabidopsis reveals a link between adhesion response and cell differentiation in the epidermis. The Plant Cell 11: 2187-2201.
82. Zhu YP, Xu KX, Luo B, Wang JW, Chen XY. 2003. An ATP-binding cassette transporter GhWBC1 from elongating cotton fibers. Plant Physiology 133: 580-588.