Ascoma development and phylogeny of an apothecioid dothideomycete, Catinella olivacea

American Journal of Botany

Volumn 94, Issue 11, 2007, Pages 1890-1899

  Greif, Matthew D ^a   Gibas, Connie Fe C ^b   Tsuneda, Akihiko ^b   Currah, Randolph S ^b  

^a FIELD MUSEUM OF NATURAL HISTORY   (United States)

^b UNIVERSITY OF ALBERTA   (Canada)

Author keywords

Alberta; Apothecioid; Ascolocular ontogeny; Ascostroma; Bitunicate; Canada; Dermateaceae; Dothideomycetes; Helotiales

Indexed keywords

ADAPTATION; ARTHROPOD; BIOLOGICAL DEVELOPMENT; DISPERSAL; FUNGUS; ONTOGENY; PHYLOGENETICS; PHYLOGENY;

ALBERTA; CANADA; NORTH AMERICA;

ARTHROPODA; CATINELLA (ASCOMYCETE); DERMATEACEAE; DOTHIDEOMYCETES; FUNGI; HELOTIALES; LEOTIOMYCETES;

EID: 36249004329     PISSN: 00029122     EISSN: None     Source Type: Journal    
DOI: 10.3732/ajb.94.11.1890     Document Type: Article

References (53)

1. ALTSCHUL, S. F., T. L. MADDEN, A. A. SCHÄFFER, J. ZHANG, Z. ZHANG, W. MILLER, AND D. J. LIPMAN. 1997. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Research 25: 3389-3402.
2. BARR, M. E. 1987. Prodromus to class Loculoascomycetes. Hamilton I. Newell, Amherst, Massachusetts, USA.
3. BARR, M., AND S. M. HUHNDORF. 2001. Loculoascomycetes. In D. J. McLaughlin, E. G. McLaughlin, and P. A. Lemke [eds.], The Mycota, a comprehensive treatise on fungi as experimental systems for basic and applied research, vol. VII, Systematics and evolution, part A, 283-305. Springer, New York, New York, USA.
4. BERBEE, M. 1996. Loculoascomycete origins and evolution of filamentous Ascomycete morphology based on 18S rRNA gene sequence data. Molecular Biology and Evolution 13: 462-470.
5. BEZERRA, J. L., AND J. W. KIMBROUGH. 1982. Culture and cytological development of Rhytidhysteron rufulum on citrus. Canadian Journal of Botany 60: 568-579.
6. BOUDIER, J. L. E. 1907. Histoire et classification des Discomycétes d'Europe, edition anastatica. A. Asher, Amsterdam, Netherlands.
7. BREITENBACH, J., AND F. KRÄNZLIN. 1981. Champignons de Suisse, Contribution à la connaissance de la flore fongique de Suisse. Tome 1 Les Ascomycètes Benziger AG, Lucerne, Switzerland.
8. CLEMENTS, F. E., AND C. L. SHEAR. 1931. The genera of fungi. H.W. Wilson, New York, New York, USA.
9. CUBERO, O. F., A. CRESPO, J. FATEHI, AND P. D. BRIDGE. 1999. DNA extraction and PCR amplification methods suitable for fresh, herbarium-stored, lichenized, and other fungi. Plant Systematics and Evolution 216: 243-249.
10. CURRAH, R. S. 1985. Taxonomy of the Onygenales: Arthrodermataceae, Gymnoascaceae, Myxotrichaceae and Onygenaceae. Mycotaxon 23: 1-216.
11. DENNIS, R. W. G. 1977. British Ascomycetes. J. Cramer, Vaduz, Germany.
12. DURAND, E. J. 1922. The genus Catinella. Bulletin of the Torrey Botanical Club 49: 15-21.
13. EMMONS, C. W. 1932. The development of the ascocarp in two species of Thielavia. Bulletin of the Torrey Botanical Club 59: 415-422.
14. ERIKSSON, O. E. 1981. The families of bitunicate ascomycetes. Opera Botanica 60: 7-220.
15. ERIKSSON, O. E., H. O. BARAL, R. S. CURRAH, K. HANSEN, C. P. KURTZMAN, G. RAMBOLD, AND T. LAESSOE [EDS.]. 2004. Outline of Ascomycota 2004. Myconet 10: 1-99.
16. FELSENSTEIN, J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39: 783-791.
17. GREIF, M., AND R. S. CURRAH. 2003. A functional interpretation of the role of the reticuloperidium in whole-ascoma dispersal by arthropods. Mycologial Research 107: 77-81.
18. GREIF, M., A. TSUNEDA, AND R. S. CURRAH. 2004. The development and dehiscence mechanism of Cryptendoxyla hypophloia, a cleistothecial ascomycete isolated from the bodies of arthropods. International Journal of Plant Sciences 165: 957-964.
19. HUELSENBECK, J. P., AND F. RONQUIST. 2001. MrBayes: Bayesian inference of phylogenetic trees. Bioinformatics 17: 754-755.
20. HUELSENBECK, J. P., P. V. D. MARK, AND F. RONQUIST. 2001. MrBayes: Bayesian inference of phylogenetic trees version 3.1.2. Website http://mrbayes.csit.fsu.edu/download.php. [Accessed 8 August 2006].
21. INGOLD, C. T. 1959. Jelly as a water-reserve in fungi. Transactions of the British Mycological Society 42: 475-478.
22. KEIZER, G. 1990. Twee opvallende zeldzame Ascomyceten: Catinella olivacea en Jafneadelphus amethystinus. Coolia 33: 58-62.
23. KORF, R. P. 1973. Discomycetes and Tuberales. In G. C. Ainsworth, F. K. Sparrow, and A. S. Sussman [eds.], The fungi, an advanced treatise, vol. IVA, A taxonomic review with keys: Ascomycetes and Fungi Imperfecti, 249-319. Academic Press, New York, New York, USA.
24. KRUYS, A., O. E. ERIKSSON, AND M. WEDIN. 2006. Phylogenetic relationships of coprophilous Pleosporales (Dothideomcetes, Ascomycota), and the classification of some bitunicate taxa of unknown position. Mycological Research 110: 527-536.
25. KUTORGA, E., AND D. L. HAWKSWORTH. 1997. A reassessment of the genera referred to the family Patellariaceae (Ascomycota). Systema Ascomycetum 15: 1-110.
26. LANE, D. J., B. PACE, G. J. OLSEN, D. A. STAHL, M. L. SOGIN, AND N. R. PACE. 1985. Rapid determination of 16S ribosomal RNA sequences for phylogenetic analyses. Proceedings of the National Academy of Sciences, USA 82: 6955-6959.
27. LINDEMUTH, R., N. WIRTZ, AND H. T. LUMBSCH. 2001. Phylogenetic analysis of nuclear and mitochondrial rDNA sequences supports the view that Loculoascomycetes (Ascomycota) are not monophyletic. Mycological Research 105: 1176-1181.
28. LUMBSCH, H. T., I. SCHMITT, R. LINDEMUTH, A. MILLER, A. MANGOLD, F. FERNANDEZ, AND S. HUHNDORF. 2005. Performance of four ribosomal DNA regions to infer higher-level phylogenetic relationships of inoperculate euascomycetes (Leotiomyceta). Molecular Phylogenetics and Evolution 34: 512-524.
29. LUMLEY, T. C., D. GIGNAC, AND R. S. CURRAH. 2001. Microfungus communities of white spruce and trembling aspen logs at different stages of decay in disturbed and undisturbed sites in the boreal mixedwood region of Alberta. Canadian Journal of Botany 79: 76-92.
30. LUTTRELL, E. S. 1973. Loculoascomycetes. In G. C. Ainsworth, F. K. Sparrow, and A. S. Sussman [eds.], The fungi; an advanced treatise, vol. IVA, A taxonomic review with keys: Ascomycetes and Fungi Imperfecti, 135-219. Academic Press, New York, New York, USA.
31. MOORE, E. J. 1965. Fungal gel tissue ontogenesis. American Journal of Botany 52: 389-395.
32. PANG, K. L., M. A. ABDEL-WAHAB, S. SIVICHAI, H.M. EL-SHAROUNEY, AND E. B. G. JONES. 2002. Jahnulales (Dothideomycetes, Ascomycota): a new order of lignicolous freshwater ascomycetes. Mycological Research 106: 1031-1042.
33. PFISTER, D. H., AND J. W. KIMBROUGH. 2001. Discomycetes. In D. J. McLaughlin, E. G. McLaughlin, and P. A. Lemke [eds.], The Mycota, a comprehensive treatise on fungi as experimental systems for basic and applied research, vol. VII, Systematics and evolution, part A, 257-281. Springer, New York, New York, USA.
34. POMERLEAU, R. 1980. Flore des champignons au Québec et régions limitrophes. Les éditions la presse, Ottawa, Ontario, Canada.
35. POSADA, D., AND K. A. CRANDALL. 1998. Modeltest: testing the model of DNA substitution. Bioinformatics 14: 817-818.
36. RAMBAUT, A. 2002. Se-Al: Sequence alignment editor. Website http://evolve.zoo.ox.ac.uk/. [Accessed 23 May 2005].
37. SCHEUER, C. H. 1991. Taphrophilia (Dothideales: Tubeufiaceae) and two species of Tubeufia with dark setae. Mycological Research 95: 811-816.
38. SCHMIDT, H. A., K. STRIMMER, M. VINGRON, AND A. VON HAESELER. 2002. TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing. Bioinformatics 18: 502-504.
39. SCHOCH, C. L., R. A. SHOEMAKER, K. A. SEIFERT, S. HAMBLETON, J. W. SPATAFORA, AND P. W. CROUS. 2007. A multigene phylogeny of the Dothideomycetes using four nuclear loci. Mycologia 98: 1041-1052.
40. SEAVER, F. J. 1961. The North American cup-fungi (Inoperculates), supplemented edition. Hafner, New York, New York, USA.
41. SHERWOOD, M. A. 1981. Convergent evolution in discomycetes from bark and wood. Botanical Journal of the Linnean Society 82: 15-34.
42. SHIMODAIRA, H., AND M. HASEGAWA. 1999. Multiple comparisons of loglikelihoods with applications to phylogenetic inference. Molecular Biology and Evolution 16: 1114-1116.
43. SILVA-HANLIN, D. M. W., AND R. T. HANLIN. 1999. Small subunit ribosomal RNA gene phylogeny of several loculoascomycetes and its taxonomic implications. Mycological Research 103: 153-160.
44. SIVANESAN, A. 1983. The Bitunicate Ascomycetes and their anamorphs. J. Cramer, Vaduz, Germany.
45. SPATAFORA, J. W., T. G. MITCHELL, AND R. VILGALYS. 1995. Analysis of genes coding for small-subunit rRNA sequences in studying phylogenetics of dematiaceous fungal pathogens. Journal of Clinical Microbiology 33: 1322-1326.
46. SPATAFORA, J. W., G. H. SUNG, D. JOHNSON, C. HESSE, B. O'ROURKE, M. SERDANI, R. SPOTTS, F. LUTZONI, V. HOFSTETTER, J. MIADIKOWSKA, V. REEB, C. GUEIDAN, E. FRAKER, T. LUMBSCH, R. LÜCKING, I. SCHMITT, K. HOSAKA, A. APTROOT, C. ROUX, A. N. MILLER, D. M. GEISER, J. HAFELLNER, G. HESTMARK, A. E. ARNOLD, B. BÜDEL, A. RAUHUT, D. HEWITT, W. A. UNTEREINER, M. S. COLE, C. SCHEIDEGGER, M. SCHULZ, H. SIPMAN, AND C. L. SCHOCH. 2007. A five-gene phylogeny of Pezizomycotina. Mycologia 98: 1018-1028.
47. SPOONER, B. M., AND N. LEGON. 1999. Profiles of fungi 35: Catinella olivacea (Batsch) Boud. Mycologist 35: 86.
48. STRIMMER, K., AND A. RAMBAUT. 2002. Inferring confidence sets of possibly mis-specified gene trees. Proceedings of the Royal Society of London, Series B 269: 137-142.
49. STRÖDEL, R. 1984. Das olivfarbene Kelchbecherchen, Catinella olivacea. Beiträge zur Kenntnis der Pilze Mitteleuropas 1: 175-178.
50. SWOFFORD, D. L. 1998. PAUP*: phylogenetic analysis using parsimony (*and other methods), version 4. Sinauer, Sunderland, Massachusetts, USA.
51. TEHLER, A., D. P. LITTLE, AND J. S. FARRIS. 2003. The full-length phylogenetic tree from 1551 ribosomal sequences of chitinous fungi, Fungi*. Mycological Research 107: 901-916.
52. TSUNEDA, A., AND R. S. CURRAH. 2004. Ascomatal morphogenesis in Myxotrichum arcticum supports the derivation of the Myxotrichaceae from a discomycetous ancestor. Mycologia 96: 627-635.
53. WHITE, T. J., T. D. BRUNS, S. B. LEE, AND J. W. TAYLOR. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In M. A. Innis, D. H. Gelfand, J. J. Sninsky, and T. J. White [eds.], PCR protocols: a guide to methods and applications, 315-322. Academic Press, New York, New York, USA.