-
1
-
-
31044452898
-
Identification of a nitroimidazo-oxazine-specific protein involved in PA-824 resistance in Mycobacterium tuberculosis
-
1326169 16387854 10.1073/pnas.0508392103
-
Manjunatha UH Boshoff H Dowd CS Zhang L Albert TJ Norton JE Daniels L Dick T Pang SS Barry CE 3rd Identification of a nitroimidazo-oxazine-specific protein involved in PA-824 resistance in Mycobacterium tuberculosis Proc Natl Acad Sci U S A 2006, 103:431-436. 1326169 16387854 10.1073/pnas.0508392103
-
(2006)
Proc Natl Acad Sci U S A
, vol.103
, pp. 431-436
-
-
Manjunatha, U.H.1
Boshoff, H.2
Dowd, C.S.3
Zhang, L.4
Albert, T.J.5
Norton, J.E.6
Daniels, L.7
Dick, T.8
Pang, S.S.9
Barry III, C.E.10
-
2
-
-
30944469304
-
Mutation discovery in bacterial genomes: Metronidazole resistance in Helicobacter pylori
-
10.1038/nmeth805 16299480
-
Albert TJ Dailidiene D Dailide G Norton JE Kalia A Richmond TA Molla M Singh J Green RD Berg DE Mutation discovery in bacterial genomes: metronidazole resistance in Helicobacter pylori Nat Methods 2005, 2:951-953. 10.1038/nmeth805 16299480
-
(2005)
Nat Methods
, vol.2
, pp. 951-953
-
-
Albert, T.J.1
Dailidiene, D.2
Dailide, G.3
Norton, J.E.4
Kalia, A.5
Richmond, T.A.6
Molla, M.7
Singh, J.8
Green, R.D.9
Berg, D.E.10
-
3
-
-
33646478851
-
Molecular genetic anatomy of inter- and intraserotype variation in the human bacterial pathogen group A Streptococcus
-
1459018 16636287 10.1073/pnas.0510279103
-
Beres SB Richter EW Nagiec MJ Sumby P Porcella SF DeLeo FR Musser JM Molecular genetic anatomy of inter- and intraserotype variation in the human bacterial pathogen group A Streptococcus Proc Natl Acad Sci U S A 2006, 103:7059-7064. 1459018 16636287 10.1073/pnas.0510279103
-
(2006)
Proc Natl Acad Sci U S A
, vol.103
, pp. 7059-7064
-
-
Beres, S.B.1
Richter, E.W.2
Nagiec, M.J.3
Sumby, P.4
Porcella, S.F.5
DeLeo, F.R.6
Musser, J.M.7
-
4
-
-
33645776051
-
Genome-wide analysis of group a streptococci reveals a mutation that modulates global phenotype and disease specificity
-
1354197 16446783 10.1371/journal.ppat.0020005
-
Sumby P Whitney AR Graviss EA DeLeo FR Musser JM Genome-wide analysis of group a streptococci reveals a mutation that modulates global phenotype and disease specificity PLoS Pathog 2006, 2:e5. 1354197 16446783 10.1371/ journal.ppat.0020005
-
(2006)
PLoS Pathog
, vol.2
-
-
Sumby, P.1
Whitney, A.R.2
Graviss, E.A.3
DeLeo, F.R.4
Musser, J.M.5
-
5
-
-
1542316916
-
Tracking the evolution of the SARS coronavirus using high-throughput, high-density resequencing arrays
-
353227 14993206 10.1101/gr.2141004
-
Wong CW Albert TJ Vega VB Norton JE Cutler DJ Richmond TA Stanton LW Liu ET Miller LD Tracking the evolution of the SARS coronavirus using high-throughput, high-density resequencing arrays Genome Res 2004, 14:398-405. 353227 14993206 10.1101/gr.2141004
-
(2004)
Genome Res
, vol.14
, pp. 398-405
-
-
Wong, C.W.1
Albert, T.J.2
Vega, V.B.3
Norton, J.E.4
Cutler, D.J.5
Richmond, T.A.6
Stanton, L.W.7
Liu, E.T.8
Miller, L.D.9
-
6
-
-
33744826256
-
Probing genomic diversity and evolution of Escherichia coli O157 by single nucleotide polymorphisms
-
1473186 16606700 10.1101/gr.4759706
-
Zhang W Qi W Albert TJ Motiwala AS Alland D Hyytia-Trees EK Ribot EM Fields PI Whittam TS Swaminathan B Probing genomic diversity and evolution of Escherichia coli O157 by single nucleotide polymorphisms Genome Res 2006, 16:757-767. 1473186 16606700 10.1101/gr.4759706
-
(2006)
Genome Res
, vol.16
, pp. 757-767
-
-
Zhang, W.1
Qi, W.2
Albert, T.J.3
Motiwala, A.S.4
Alland, D.5
Hyytia-Trees, E.K.6
Ribot, E.M.7
Fields, P.I.8
Whittam, T.S.9
Swaminathan, B.10
-
7
-
-
15944384859
-
Microarray-based resequencing of multiple Bacillus anthracis isolates
-
549062 15642093 10.1186/gb-2004-6-1-r10
-
Zwick ME McAfee F Cutler DJ Read TD Ravel J Bowman GR Galloway DR Mateczun A Microarray-based resequencing of multiple Bacillus anthracis isolates Genome Biol 2005, 6:R10. 549062 15642093 10.1186/gb-2004-6-1-r10
-
(2005)
Genome Biol
, vol.6
-
-
Zwick, M.E.1
McAfee, F.2
Cutler, D.J.3
Read, T.D.4
Ravel, J.5
Bowman, G.R.6
Galloway, D.R.7
Mateczun, A.8
-
8
-
-
33751544539
-
Comparative genome sequencing of Escherichia coli allows bacterial evolution to be observed on a laboratory timescale
-
10.1038/ng1906 17086184
-
Herring CD Raghurathan A Honisch C Patel T Applebee MK Joyce AR Albert TJ Blattner FR van den Boom D Cantor CR Palsson BØ Comparative genome sequencing of Escherichia coli allows bacterial evolution to be observed on a laboratory timescale Nat Genet 2006, 38:1406-1412. 10.1038/ ng1906 17086184
-
(2006)
Nat Genet
, vol.38
, pp. 1406-1412
-
-
Herring, C.D.1
Raghurathan, A.2
Honisch, C.3
Patel, T.4
Applebee, M.K.5
Joyce, A.R.6
Albert, T.J.7
Blattner, F.R.8
van den Boom, D.9
Cantor, C.R.10
Palsson, B.Ø.11
-
9
-
-
24644462173
-
Accurate multiplex polony sequencing of an evolved bacterial genome
-
10.1126/science.1117389 16081699
-
Shendure J Porreca GJ Reppas NB Lin X McCutcheon JP Rosenbaum AM Wang MD Zhang K Mitra RD Church GM Accurate multiplex polony sequencing of an evolved bacterial genome Science 2005, 309:1728-1732. 10.1126/ science.1117389 16081699
-
(2005)
Science
, vol.309
, pp. 1728-1732
-
-
Shendure, J.1
Porreca, G.J.2
Reppas, N.B.3
Lin, X.4
McCutcheon, J.P.5
Rosenbaum, A.M.6
Wang, M.D.7
Zhang, K.8
Mitra, R.D.9
Church, G.M.10
-
10
-
-
33645464048
-
Genome-wide detection of polymorphisms at nucleotide resolution with a single DNA microarray
-
10.1126/science.1123726 16527929
-
Gresham D Ruderfer DM Pratt SC Schacherer J Dunham MJ Botstein D Kruglyak L Genome-wide detection of polymorphisms at nucleotide resolution with a single DNA microarray Science 2006, 311:1932-1936. 10.1126/science.1123726 16527929
-
(2006)
Science
, vol.311
, pp. 1932-1936
-
-
Gresham, D.1
Ruderfer, D.M.2
Pratt, S.C.3
Schacherer, J.4
Dunham, M.J.5
Botstein, D.6
Kruglyak, L.7
-
11
-
-
33744482546
-
Comprehensive mutation identification in an evolved bacterial cooperator and its cheating ancestor
-
1472437 16707573 10.1073/pnas.0510740103
-
Velicer GJ Raddatz G Keller H Deiss S Lanz C Dinkelacker I Schuster SC Comprehensive mutation identification in an evolved bacterial cooperator and its cheating ancestor Proc Natl Acad Sci U S A 2006, 103:8107-8112. 1472437 16707573 10.1073/pnas.0510740103
-
(2006)
Proc Natl Acad Sci U S A
, vol.103
, pp. 8107-8112
-
-
Velicer, G.J.1
Raddatz, G.2
Keller, H.3
Deiss, S.4
Lanz, C.5
Dinkelacker, I.6
Schuster, S.C.7
-
12
-
-
24044455869
-
Genome sequencing in microfabricated high-density picolitre reactors
-
1464427 16056220
-
Margulies M Egholm M Altman WE Attiya S Bader JS Bemben LA Berka J Braverman MS Chen YJ Chen Z Dewell SB Du L Fierro JM Gomes XV Godwin BC He W Helgesen S Ho CH Irzyk GP Jando SC Alenquer ML Jarvie TP Jirage KB Kim JB Knight JR Lanza JR Leamon JH Lefkowitz SM Lei M Li J Lohman KL Lu H Makhijani VB McDade KE McKenna MP Myers EW Nickerson E Nobile JR Plant R Puc BP Ronan MT Roth GT Sarkis GJ Simons JF Simpson JW Srinivasan M Tartaro KR Tomasz A Vogt KA Volkmer GA Wang SH Wang Y Weiner MP Yu P Begley RF Rothberg JM Genome sequencing in microfabricated high-density picolitre reactors Nature 2005, 437:376-380. 1464427 16056220
-
(2005)
Nature
, vol.437
, pp. 376-380
-
-
Margulies, M.1
Egholm, M.2
Altman, W.E.3
Attiya, S.4
Bader, J.S.5
Bemben, L.A.6
Berka, J.7
Braverman, M.S.8
Chen, Y.J.9
Chen, Z.10
Dewell, S.B.11
Du, L.12
Fierro, J.M.13
Gomes, X.V.14
Godwin, B.C.15
He, W.16
Helgesen, S.17
Ho, C.H.18
Irzyk, G.P.19
Jando, S.C.20
Alenquer, M.L.21
Jarvie, T.P.22
Jirage, K.B.23
Kim, J.B.24
Knight, J.R.25
Lanza, J.R.26
Leamon, J.H.27
Lefkowitz, S.M.28
Lei, M.29
Li, J.30
Lohman, K.L.31
Lu, H.32
Makhijani, V.B.33
McDade, K.E.34
McKenna, M.P.35
Myers, E.W.36
Nickerson, E.37
Nobile, J.R.38
Plant, R.39
Puc, B.P.40
Ronan, M.T.41
Roth, G.T.42
Sarkis, G.J.43
Simons, J.F.44
Simpson, J.W.45
Srinivasan, M.46
Tartaro, K.R.47
Tomasz, A.48
Vogt, K.A.49
Volkmer, G.A.50
Wang, S.H.51
Wang, Y.52
Weiner, M.P.53
Yu, P.54
Begley, R.F.55
Rothberg, J.M.56
more..
-
13
-
-
31544438578
-
Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110
-
1681481 16738553 10.1038/msb4100049
-
Hayashi K Morooka N Yamamoto Y Fujita K Isono K Choi S Ohtsubo E Baba T Wanner BL Mori H Horiuchi T Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110 Mol Syst Biol 2006, 2:2006-0007. 1681481 16738553 10.1038/msb4100049
-
(2006)
Mol Syst Biol
, vol.2
, pp. 2006-20007
-
-
Hayashi, K.1
Morooka, N.2
Yamamoto, Y.3
Fujita, K.4
Isono, K.5
Choi, S.6
Ohtsubo, E.7
Baba, T.8
Wanner, B.L.9
Mori, H.10
Horiuchi, T.11
-
14
-
-
0023669069
-
The physical map of the whole E. coli chromosome: Application of a new strategy for rapid analysis and sorting of a large genomic library
-
10.1016/0092-8674(87)90503-4 3038334
-
Kohara Y Akiyama K Isono K The physical map of the whole E. coli chromosome: Application of a new strategy for rapid analysis and sorting of a large genomic library Cell 1987, 50:495-508. 10.1016/ 0092-8674(87)90503-4 3038334
-
(1987)
Cell
, vol.50
, pp. 495-508
-
-
Kohara, Y.1
Akiyama, K.2
Isono, K.3
-
15
-
-
0033805195
-
Oligonucleotide microarray based detection of repetitive sequence changes
-
10.1002/1098-1004(200010)16:4<354::AID-HUMU8>3.0.CO;2-V 11013446
-
Hacia JG Edgemon K Fang N Mayer RA Sudano D Hunt N Collins FS Oligonucleotide microarray based detection of repetitive sequence changes Human Mutation 2000, 16:354-363. 10.1002/ 1098-1004(200010)16:4<354::AID-HUMU8>3.0.CO;2-V 11013446
-
(2000)
Human Mutation
, vol.16
, pp. 354-363
-
-
Hacia, J.G.1
Edgemon, K.2
Fang, N.3
Mayer, R.A.4
Sudano, D.5
Hunt, N.6
Collins, F.S.7
-
16
-
-
0041335300
-
Physiological studies of Escherichia coli strain MG1655: Growth defects and apparent cross-regulation of gene expression
-
193769 12949114 10.1128/JB.185.18.5611-5626.2003
-
Soupene E van Heeswijk WC Plumbridge J Stewart V Bertenthal D Lee H Prasad G Paliy O Charernnoppakul P Kustu S Physiological studies of Escherichia coli strain MG1655: Growth defects and apparent cross-regulation of gene expression J Bacteriol 2003, 185:5611-5626. 193769 12949114 10.1128/JB.185.18.5611-5626.2003
-
(2003)
J Bacteriol
, vol.185
, pp. 5611-5626
-
-
Soupene, E.1
van Heeswijk, W.C.2
Plumbridge, J.3
Stewart, V.4
Bertenthal, D.5
Lee, H.6
Prasad, G.7
Paliy, O.8
Charernnoppakul, P.9
Kustu, S.10
-
17
-
-
0035184770
-
High-throughput variation detection and genotyping using microarrays
-
311146 11691856
-
Cutler DJ Zwick ME Carrasquillo MM Yohn CT Tobin KP Kashuk C Mathews DJ Shah NA Eichler EE Warrington JA Chakravarti A High-throughput variation detection and genotyping using microarrays Genome Res 2001, 11:1913-1925. 311146 11691856
-
(2001)
Genome Res
, vol.11
, pp. 1913-1925
-
-
Cutler, D.J.1
Zwick, M.E.2
Carrasquillo, M.M.3
Yohn, C.T.4
Tobin, K.P.5
Kashuk, C.6
Mathews, D.J.7
Shah, N.A.8
Eichler, E.E.9
Warrington, J.A.10
Chakravarti, A.11
|