Effects of soil fumigants on methanotrophic activity

Atmospheric Environment

Volumn 41, Issue 37, 2007, Pages 8150-8162

  Spokas, K ^a   King, J ^b,c   Wang, D ^d   Papiernik, S ^a  

^a AGRICULTURAL RESEARCH SERVICE   (United States)

^b UNIVERSITY OF MINNESOTA   (United States)

^c Department of Ecology Evolution and Behavior ^*  (United States)

^d U S DEPARTMENT OF AGRICULTURE   (United States)

Author keywords

Enhanced biodegradation; Fumigation history; Methane oxidation; Methanotrophs

Indexed keywords

ENHANCED BIODEGRADATION; FUMIGATION HISTORY; METHANE OXIDATION; METHANOTROPHS;

BIODEGRADATION; LAND FILL; METHANE; OXIDATION;

SOIL MECHANICS;

1,3 DICHLOROPENE; AGRICULTURAL CHEMICAL; CHLOROPICRIN; METHANE; METHYLISOTHIOCYANATE; PROPYLENE; THIOCYANIC ACID DERIVATIVE; UNCLASSIFIED DRUG;

FUMIGANT; FUMIGATION; METHANE; METHANOGENIC BACTERIUM; METHANOTROPHY; MICROBIAL ACTIVITY; MICROBIAL COMMUNITY; OXIDATION;

ARTICLE; BIODEGRADATION; CROP; FOREST MANAGEMENT; LANDFILL; METHANOTROPH; OXIDATION; PRIORITY JOURNAL; SEEDLING; SOIL FUMIGATION; SOIL PROPERTY;

EID: 36049005013     PISSN: 13522310     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.atmosenv.2007.06.028     Document Type: Article

References (63)

1. Amaral J.A., Ren T., and Knowles R. Atmospheric methane consumption by forest soils and extracted bacteria at different pH values. Applied Environmental Microbiology 64 (1998) 520-525
2. +, and CO oxidation by methanotrophs and nitrifiers. Microbiological Reviews 53 (1989) 68-84
3. 4 mixing ratios. FEMS Microbiology Ecology 101 (1992) 261-270
4. Bending G.D., and Lincoln S.D. Inhibition of soil nitrifying bacteria communities and their activities by glucosinolate hydrolysis products. Soil Biology and Biochemistry 32 (2000) 1261-1269
5. Boeckx P., VanCleemput O., and Meyer T. The influence of land use and pesticides on methane oxidation in some Belgium soils. Biology and Fertility of Soils 27 (1998) 293-298
6. Boon N., Top E.M., Verstraete W., and Siciliano S.D. Bioaugmentation as a tool to protect the structure and function of an activated-sludge microbial community against a 3-chloroaniline shock load. Applied Environmental Microbiology 69 (2003) 1151-1520
7. 4 at high partial pressures in an organic landfill cover soil under different moisture regimes. FEMS Microbiology Ecology 26 (1998) 207-217
8. Börjesson G., Sundh I., and Svensson B. Microbial oxidation of CH4 at different temperatures in landfill cover soils. FEMS Microbiology Ecology 48 (2004) 305-312
9. Bosma T., and Janssem D.B. Conversion of chlorinated propanes by Methylosinus trichosporium OB3b expressing soluble methane monooxygenase. Applied Microbiology and Biotechnology 50 (1998) 105-112
10. 4 flux. Soil Biology and Biochemistry 33 (2001) 1625-1631
11. Bull I.D., Parekh N.R., Hall G.H., Ineson P., and Evershed R.P. Detection and classification of atmospheric methane oxidizing bacteria in soil. Nature 405 (2000) 175-178
12. Castro M.S., Melillo J.M., Steudler P.A., and Chapman J.W. Soil moisture as a predictor of methane uptake by temperate forest soils. Canadian Journal of Forest Research 24 (1994) 1085-1810
13. Chan A.S.K., and Parkin T.B. Methane oxidation and production activity in soils from natural and agricultural ecosystems. Journal of Environmental Quality 30 (2001) 1896-1903
14. Colby J., Dalton H., and Whittenbury R. An improved assay for bacterial methane mono-oxygenase: some properties of the enzyme from Methylomonas methanica. Biochemical Journal 151 (1975) 459-462
15. 2, NO. Industrial Journal of Microbiology 39 (1999) 193-202
16. Crill P.M. Seasonal patterns of methane uptake and carbon dioxide release by a temperate woodland soil. Global Biogeochemical Cycles 5 (1991) 319-334
17. Degens B.P. Decreases in microbial functional diversity do not result in corresponding changes in decomposition rates under different moisture conditions. Soil Biology and Biochemistry 30 (1998) 1989-2000
18. Delgado J.A., and Mosier A.R. Mitigation alternatives to decrease nitrous oxide emissions and urea-nitrogen loss and their effects on methane flux. Journal of Environmental Quality 25 (1996) 1105-1110
19. Dlugokencky E.J., Masarie K.A., Lang P.M., and Tans P.P. Continuing decline in the growth rate of the atmospheric methane burden. Nature 393 (1998) 447-450
20. 2O production and consumption in soil. In: Andreae M., and Schimel D. (Eds). Exchange of Trace Gases between Terrestrial Ecosystems and the Atmosphere (1989), Wiley, Hoboken, NJ 7-21
21. Gebert J., Groengroeft A., and Miehlich G. Kinetics of microbial landfill methane oxidation in biofilters. Waste Management 23 (2003) 609-619
22. Glinksi, J., Stepniewski, W., 1985. Soil Aeration and its Role for Plants, CRC Press, Boca Raton, FL, USA, 229pp.
23. Grayston S.J., and Campbell C.D. Functional biodiversity of microbial communities in the rhizospheres of hybrid larch, Larix eurollepis and Sitka spruce Picea sitchensis. Tree Physiology 16 (1996) 1031-1038
24. Hütsch B.W., Webster C.P., and Powlson D.S. Methane oxidation in soil as affected by land use, soil pH, and N fertilization. Soil Biology and Biochemistry 26 (1994) 1613-1622
25. Hütsch B.W. Tillage and landuse effects on methane oxidation rates and their vertical profiles in soil. Biology and Fertility of Soils 27 (1998) 284-292
26. Ibekwe A.M., Papiernik S.K., Gan J., Yates S.R., Crowley D.E., and Yang C.H. Microcosm enrichment of 1,3-dichloropropene-degrading soil microbial communities in a compost-amended soil. Journal of Applied Microbiology 91 (2001) 668-676
27. King J.Y., Reeburgh W.S., and Regli S.K. Methane emission and transport by arctic sedges in Alaska: results of a vegetation removal experiment. Journal of Geophysical Research 103 (1998) 29083-29092
28. Lebbink G., and Kolenbrander G.J. Quantitative effect of fumigation with 1,3-dichlorproene mixtures and with metam sodium on the soil nitrogen status. Agriculture and Environment 1 (1974) 283-292
29. Majewski M.S., McChesney M.M., Woodrow J.E., Prueger J.H., and Seiber J.N. Aerodynamic measurements of methyl bromide volatilization from tarped and nontarped fields. Journal of Environmental Quality 24 (1995) 742-752
30. Mancinelli R.L. The regulation of methane oxidation in soil. Annual Review of Microbiology 49 (1995) 581-605
31. Miller L.G., Connell T.L., Guidetti J.R., and Oremland R.S. Bacterial oxidation of methyl bromide in fumigated agricultural soils. Applied Environmental Microbiology 63 (1997) 4346-4354
32. 2O flux in subarctic, temperature and tropical grasslands. Nutrient Cycling in Agroecosystems 49 (1997) 71-83
33. Nelson, D.W., Sommers, L.E, 1996. Total carbon, organic carbon, and organic matter. In: Page, A.L., et al. (Eds.), Agronomy. In: Methods of Soil Analysis, Part 2, second ed. American Society of Agronomy, Inc., Madison, WI, pp. 961-1010.
34. Oremland R.S., Miller L.G., Culbertson C.W., Connell T.L., and Jahnke L. Degradation of methyl bromide by methanotrophic bacteria in cell suspensions and soils. Applied Environmental Microbiology 60 (1994) 3640-3646
35. Priemé A., Sitaula J.I.B., Kasimir-Klemedtsson A., and Bakken L.R. Extraction of methane-oxidizing bacteria from soil particles. FEMS Microbiology Ecology 21 (1996) 59-68
36. Priemé A., and Ekelund F. Five pesticides decreased oxidation of atmospheric methane in a forest soil. Soil Biology and Biochemistry 33 (2001) 831-835
37. Reay D.S., Radajewski S., Murrell J.C., McNamara N., and Nedwell D.B. Effects of land-use on the activity and diversity of methane oxidizing bacteria in forest soils. Soil Biology and Biochemistry 33 (2001) 1613-1623
38. Reeburgh W.S., Whalen S.C., and Alperin M.J. The role of methylotrophy in the global methane budget. In: Murrell J.C., and Kelly D.P. (Eds). Microbial Growth on C1 Compounds (1993), Intercept Ltd., UK 1-14
39. Ridge E.H. Studies on soil fumigation. II. Effects on bacteria. Soil Biology and Biochemistry 8 (1976) 249-253
40. Ross D.J., Tate R., Cairns A., and Meyrick K.F. Influence of storage on soil microbial biomass estimated by three biochemical procedures. Soil Biology and Biochemistry 12 (1980) 369-374
41. Rovira A.D. Effects on ammonium, nitrate, and phosphate in soil sand on the growth, nutrition, and yield of wheat. Soil Biology and Biochemistry 8 (1976) 241-247
42. Saari A., and Martikainen P.J. Dimethyl sulphoxide, DMSO and dimethyl sulphide, DMS as inhibitors of methane oxidation in forest soil. Soil Biology and Biochemistry 35 (2003) 383-389
43. Schaefer J.K., and Oremland R.S. Oxidation of methyl bromide by the facultative methylotroph strain IMB-1. Applied Environmental Microbiology 65 (1999) 5035-5041
44. Schimel J.P., and Gulledge J. Microbial community structure and global trace gases. Global Change Biology 4 (1998) 745-758
45. Scheutz C., Mosbæk H., and Kjeldsen P. Attenuation of methane and volatile organic compounds in landfill soil covers. Journal of Environmental Quality 33 (2004) 61-71
46. Schwarenback, R.P., Gschwend, W.P., Imboden, D.M., 1993. Environmental Organic Chemistry, Wiley, New York, NY, 365pp.
47. Seghers D., Verthé K., Reheul D., Bulcke R., Siciliano S.D., Verstraete W., and Top E.M. Effect of long-term herbicide applications on the bacterial community structure and function in an agricultural soil. FEMS Microbiology Ecology 46 (2003) 139-146
48. Simpson I.J., Rowland F.S., Meinardi S., and Blake D.R. Influence of biomass burning during recent fluctuations in the slow growth of global tropospheric methane. Geophysical Research Letters 33 (2006) L22808 10.1029/2006GL027330
49. Smelt J.H., Crum S.J.H., and Teunissen W. Accelerated transformation of the fumigant methyl isothiocyanate in soil after repeated application of metam-sodium. Journal of Environmental Science and Health B 24 (1989) 437-455
50. Smith K.A., Dobbie K.E., Ball B.C., Bakken L.R., Sitaula B.K., Hansen S., Brumme R., Borken W., Christensen S., Prieme A., Fowler D., MacDonald J.A., Skiba U., Klemedtsson L., Kasmir-Klemedtsson A., Degorska A., and Orlanski P. Oxidation of atmospheric methane in northern European soils, comparison with other ecosystems and uncertainties in the global terrestrial sink. Global Change Biology 6 (2000) 791-803
51. Spokas K., and Wang D. Stimulation of nitrous oxide production resulted from soil fumigation with chloropicrin. Atmospheric Environment 37 (2003) 3501-3507
52. Spokas K., Wang D., and Venterea R. Greenhouse gas production and emission from a forest nursery soil following fumigation with chloropicrin and methyl isothiocyanate. Soil Biology and Biochemistry 37 (2005) 475-485
53. Topp E. Effects of selected agrochemicals on methane oxidation by an organic agricultural soil. Canadian Journal of Soil Science 73 (1993) 287-291
54. UNEP, 1998. 1998 Assessment of alternatives to methyl bromide. Report of the Methyl Bromide Technical Options Committee, United Nations Environment Programme.
55. van Dijk H. Degradation of 1,3-dichloropropenes in the soil. Agro-Ecosystems 1 (1974) 193-204
56. Verhagen C., Lebbink G., and Bloem J. Enhanced biodegradation of the nematicides 1,3-dichloropropene and methyl isothiocyanate in a variety of soils. Soil Biology and Biochemistry 28 (1996) 1753-1756
57. Wang D., and Yates S.R. Methyl bromide emission from fields partially covered with a high density polyethylene and a virtually impermeable film. Environmental Science and Technology 32 (1998) 2515-2518
58. Wardle D. A comparative assessment of factors which influence microbial biomass carbon and nitrogen levels in soils. Biological Reviews 67 (1992) 321-358
59. Warton B., Matthiessen J.N., and Shackleton M.A. Cross-enhancement: enhanced biodegradation of isothiocyanates in soils previously treated with metham sodium. Soil Biology and Biochemistry 35 (2003) 1123-1127
60. Winfree J.P., and Cox R.S. Comparative effects of fumigation with chloropicrin and methyl bromide on mineralization of nitrogen in everglade peat. Plant Disease Reporter 42 (1958) 807-810
61. 3Br from agricultural soil fumigations. Science 267 (1995) 1979-1981
62. Yavitt J.B., Fahey T.J., and Simmons J.A. Methane and carbon dioxide dynamics in a northern hardwood ecosystem. Soil Science Society of America Journal 59 (1995) 796-804
63. Zelles L., Adrian P., Bai Q.Y., Stepper K., Adrian M.V., Fischer K., Maier A., and Ziegler A. Microbial activity measured in soils stored under different temperature and humidity conditions. Soil Biology and Biochemistry 23 (1999) 955-962