-
1
-
-
18744382506
-
ProtTest: Selection of best-fit models of protein evolution
-
Abascal F, Zardoya R, Posada D. 2005. ProtTest: selection of best-fit models of protein evolution. Bioinformatics. 21:2104-2105.
-
(2005)
Bioinformatics
, vol.21
, pp. 2104-2105
-
-
Abascal, F.1
Zardoya, R.2
Posada, D.3
-
2
-
-
0023073871
-
Giant chromosomes in ciliates
-
Ammermann D. 1987. Giant chromosomes in ciliates. Results Probl Cell Differ. 14:59-67.
-
(1987)
Results Probl Cell Differ
, vol.14
, pp. 59-67
-
-
Ammermann, D.1
-
3
-
-
33750858684
-
-
Aury JM, Jaillon O, Duret L, et al. (43 co-authors). 2006. Global trends of whole-genome duplications revealed by the ciliate Paramecium tetraurelia. Nature. 444:171-178.
-
Aury JM, Jaillon O, Duret L, et al. (43 co-authors). 2006. Global trends of whole-genome duplications revealed by the ciliate Paramecium tetraurelia. Nature. 444:171-178.
-
-
-
-
4
-
-
27144457655
-
Genome rearrangements: Mother knows best!
-
Chalker DL. 2005. Genome rearrangements: mother knows best!. Curr Biol. 15:R827-R829.
-
(2005)
Curr Biol
, vol.15
-
-
Chalker, D.L.1
-
5
-
-
13744251887
-
Communication between parental and developing genomes during Tetrahymena nuclear differentiation is likely mediated by homologous RNAs
-
Chalker DL, Fuller P, Yao MC. 2005. Communication between parental and developing genomes during Tetrahymena nuclear differentiation is likely mediated by homologous RNAs. Genetics. 169:149-160.
-
(2005)
Genetics
, vol.169
, pp. 149-160
-
-
Chalker, D.L.1
Fuller, P.2
Yao, M.C.3
-
6
-
-
0029953126
-
Non-Mendelian, heritable blocks to DNA rearrangement are induced by loading the somatic nucleus of Tetrahymena thermophila with germ line-limited DNA
-
Chalker DL, Yao MC. 1996. Non-Mendelian, heritable blocks to DNA rearrangement are induced by loading the somatic nucleus of Tetrahymena thermophila with germ line-limited DNA. Mol Cell Biol. 16:3658-3667.
-
(1996)
Mol Cell Biol
, vol.16
, pp. 3658-3667
-
-
Chalker, D.L.1
Yao, M.C.2
-
7
-
-
0023411230
-
Nucleo-cytoplasmic interaction during macronuclear differentiation in ciliate protists: Genetic basis for cytoplasmic control of SerH expression during macronuclear development in Tetrahymena thermophila
-
Doerder FP, Berkowitz MS. 1987. Nucleo-cytoplasmic interaction during macronuclear differentiation in ciliate protists: genetic basis for cytoplasmic control of SerH expression during macronuclear development in Tetrahymena thermophila. Genetics. 117:13-23.
-
(1987)
Genetics
, vol.117
, pp. 13-23
-
-
Doerder, F.P.1
Berkowitz, M.S.2
-
8
-
-
0029103019
-
Epigenetic self-regulation of developmental excision of an internal eliminated sequence in Paramecium tetraurelia
-
Duharcourt S, Bulter A, Meyer E. 1995. Epigenetic self-regulation of developmental excision of an internal eliminated sequence in Paramecium tetraurelia. Genes Dev. 9:2065-2077.
-
(1995)
Genes Dev
, vol.9
, pp. 2065-2077
-
-
Duharcourt, S.1
Bulter, A.2
Meyer, E.3
-
9
-
-
0031754574
-
Homology-dependent maternal inhibition of developmental excision of internal eliminated sequences in Paramecium tetraurelia
-
Duharcourt S, Keller AM, Meyer E. 1998. Homology-dependent maternal inhibition of developmental excision of internal eliminated sequences in Paramecium tetraurelia. Mol Cell Biol. 18:7075-7085.
-
(1998)
Mol Cell Biol
, vol.18
, pp. 7075-7085
-
-
Duharcourt, S.1
Keller, A.M.2
Meyer, E.3
-
10
-
-
33748598232
-
-
Eisen JA, Coyne RS, WuThiagarajan M, et al. (53 co-authors). 2006. Macronuclear genome sequence of the ciliate Tetrahymena thermophila, a model eukaryote. PLoS Biol. 4:e286.
-
Eisen JA, Coyne RS, WuThiagarajan M, et al. (53 co-authors). 2006. Macronuclear genome sequence of the ciliate Tetrahymena thermophila, a model eukaryote. PLoS Biol. 4:e286.
-
-
-
-
11
-
-
0021733417
-
Mendelian and non-mendelian mutations affecting surface antigen expression in Paramecium tetraurelia
-
Epstein LM, Forney JD. 1984. Mendelian and non-mendelian mutations affecting surface antigen expression in Paramecium tetraurelia. Mol Cell Biol. 4:1583-1590.
-
(1984)
Mol Cell Biol
, vol.4
, pp. 1583-1590
-
-
Epstein, L.M.1
Forney, J.D.2
-
12
-
-
4344648254
-
RNA-mediated programming of developmental genome rearrangements in Paramecium tetraurelia
-
Garnier O, Serrano V, Duharcourt S, Meyer E. 2004. RNA-mediated programming of developmental genome rearrangements in Paramecium tetraurelia. Mol Cell Biol. 24:7370-7379.
-
(2004)
Mol Cell Biol
, vol.24
, pp. 7370-7379
-
-
Garnier, O.1
Serrano, V.2
Duharcourt, S.3
Meyer, E.4
-
13
-
-
0001224329
-
Patterning and assembly of ciliature are independent processes in hypotrich ciliates
-
Grimes GW, McKenna ME, Goldsmithspoegler CM, Knaupp EA. 1980. Patterning and assembly of ciliature are independent processes in hypotrich ciliates. Science. 209:281-283.
-
(1980)
Science
, vol.209
, pp. 281-283
-
-
Grimes, G.W.1
McKenna, M.E.2
Goldsmithspoegler, C.M.3
Knaupp, E.A.4
-
14
-
-
33845203703
-
Induction of gene silencing by hairpin RNA expression in Tetrahymena thermophila reveals a second small RNA pathway
-
Howard-Till RA, Yao MC. 2006. Induction of gene silencing by hairpin RNA expression in Tetrahymena thermophila reveals a second small RNA pathway. Mol Cell Biol. 26:8731-8742.
-
(2006)
Mol Cell Biol
, vol.26
, pp. 8731-8742
-
-
Howard-Till, R.A.1
Yao, M.C.2
-
16
-
-
0036405276
-
Genome remodeling in ciliated protozoa
-
Jahn CL, Klobutcher LA. 2002. Genome remodeling in ciliated protozoa. Annu Rev Microbiol. 56:489-520.
-
(2002)
Annu Rev Microbiol
, vol.56
, pp. 489-520
-
-
Jahn, C.L.1
Klobutcher, L.A.2
-
17
-
-
0034915592
-
Evolution of nuclear dualism in ciliates: A reanalysis in light of recent molecular data
-
Katz LA. 2001. Evolution of nuclear dualism in ciliates: a reanalysis in light of recent molecular data. Int J Syst Evol Microbiol. 51:1587-1592.
-
(2001)
Int J Syst Evol Microbiol
, vol.51
, pp. 1587-1592
-
-
Katz, L.A.1
-
18
-
-
1542614590
-
Dramatic diversity of ciliate histone H4 genes revealed by comparisons of patterns of substitutions and paralog divergences among eukaryotes
-
Katz LA, Bornstein J, Lasek-Nesselquist E, Muse SV. 2004. Dramatic diversity of ciliate histone H4 genes revealed by comparisons of patterns of substitutions and paralog divergences among eukaryotes. Mol Biol Evol. 21:555-562.
-
(2004)
Mol Biol Evol
, vol.21
, pp. 555-562
-
-
Katz, L.A.1
Bornstein, J.2
Lasek-Nesselquist, E.3
Muse, S.V.4
-
19
-
-
0141706538
-
Structure of the micronuclear α-tubulin gene in the phyllopharyngean ciliate Chilodonella uncinata: Implications for the evolution of chromosomal processing
-
Katz LA, Lasek-Nesselquist E, Snoeyenbos-West OLO. 2003. Structure of the micronuclear α-tubulin gene in the phyllopharyngean ciliate Chilodonella uncinata: implications for the evolution of chromosomal processing. Gene. 315:15-19.
-
(2003)
Gene
, vol.315
, pp. 15-19
-
-
Katz, L.A.1
Lasek-Nesselquist, E.2
Snoeyenbos-West, O.L.O.3
-
20
-
-
29944442623
-
Two classes of endogenous small RNAs in Tetrahymena thermophila
-
Lee SR, Collins K. 2006. Two classes of endogenous small RNAs in Tetrahymena thermophila. Genes Dev. 20:28-33.
-
(2006)
Genes Dev
, vol.20
, pp. 28-33
-
-
Lee, S.R.1
Collins, K.2
-
21
-
-
26444477370
-
Germ line transcripts are processed by a Dicer-like protein that is essential for developmentally programmed genome rearrangements of Tetrahymena thermophila
-
Malone CD, Anderson AM, Motl JA, Rexer CH, Chalker DL. 2005. Germ line transcripts are processed by a Dicer-like protein that is essential for developmentally programmed genome rearrangements of Tetrahymena thermophila. Mol Cell Biol. 25:9151-9164.
-
(2005)
Mol Cell Biol
, vol.25
, pp. 9151-9164
-
-
Malone, C.D.1
Anderson, A.M.2
Motl, J.A.3
Rexer, C.H.4
Chalker, D.L.5
-
22
-
-
33748145267
-
Genome evolution in ciliates
-
Katz LA, Bhattacharya D, editors, Oxford: Oxford University Press
-
McGrath C, Zufall RA, Katz LA. 2006. Genome evolution in ciliates. In: Katz LA, Bhattacharya D, editors. Genomics and evolution of eukaryotic microbes. Oxford: Oxford University Press.
-
(2006)
Genomics and evolution of eukaryotic microbes
-
-
McGrath, C.1
Zufall, R.A.2
Katz, L.A.3
-
23
-
-
0030271899
-
Epigenetic programming of developmental genome rearrangements in ciliates
-
Meyer E, Duharcourt S. 1996. Epigenetic programming of developmental genome rearrangements in ciliates. Cell. 87:9-12.
-
(1996)
Cell
, vol.87
, pp. 9-12
-
-
Meyer, E.1
Duharcourt, S.2
-
24
-
-
0037145031
-
Analysis of a piwi-related gene implicates small RNAs in genome rearrangement in Tetrahymena
-
Mochizuki K, Fine NA, Fujisawa T, Gorovsky MA. 2002. Analysis of a piwi-related gene implicates small RNAs in genome rearrangement in Tetrahymena. Cell. 110:689-699.
-
(2002)
Cell
, vol.110
, pp. 689-699
-
-
Mochizuki, K.1
Fine, N.A.2
Fujisawa, T.3
Gorovsky, M.A.4
-
25
-
-
1942535718
-
Small RNAs in genome rearrangement in Tetrahymena
-
Mochizuki K, Gorovsky MA. 2004. Small RNAs in genome rearrangement in Tetrahymena. Curr Opin Genet Dev. 14:181.
-
(2004)
Curr Opin Genet Dev
, vol.14
, pp. 181
-
-
Mochizuki, K.1
Gorovsky, M.A.2
-
26
-
-
11844263265
-
A Dicer-like protein in Tetrahymena has distinct functions in genome rearrangement, chromosome segregation, and meiotic prophase
-
Mochizuki K, Gorovsky MA. 2005. A Dicer-like protein in Tetrahymena has distinct functions in genome rearrangement, chromosome segregation, and meiotic prophase. Genes Dev. 19:77-89.
-
(2005)
Genes Dev
, vol.19
, pp. 77-89
-
-
Mochizuki, K.1
Gorovsky, M.A.2
-
27
-
-
0034916154
-
Widespread distribution of extensive genome fragmentation in ciliates
-
Riley JL, Katz LA. 2001. Widespread distribution of extensive genome fragmentation in ciliates. Mol Biol Evol. 18:1372-1377.
-
(2001)
Mol Biol Evol
, vol.18
, pp. 1372-1377
-
-
Riley, J.L.1
Katz, L.A.2
-
28
-
-
0036739159
-
Insights into the diversity of choreotrich and oligotrich ciliates (Class: Spirotrichea) based on genealogical analyses of multiple loci
-
Snoeyenbos-West OLO, Salcedo T, McManus GB, Katz LA. 2002. Insights into the diversity of choreotrich and oligotrich ciliates (Class: Spirotrichea) based on genealogical analyses of multiple loci. Int J Syst Evol Microbiol. 52:1901-1913.
-
(2002)
Int J Syst Evol Microbiol
, vol.52
, pp. 1901-1913
-
-
Snoeyenbos-West, O.L.O.1
Salcedo, T.2
McManus, G.B.3
Katz, L.A.4
-
31
-
-
36349001148
-
-
Protist , doi:10.1016/j.protis.2007.05.002
-
Tekle YI, Grant J, Cole J, Patterson DJ, Katz J. 2007. A Multigene Analysis of Corallomyxa tenera sp. nov. Suggests its Membership in a Clade that Includes Gromia, Haplosporidia and Foraminifera, Protist (2007), doi:10.1016/j.protis.2007.05.002.
-
(2007)
A Multigene Analysis of Corallomyxa tenera sp. nov. Suggests its Membership in a Clade that Includes Gromia, Haplosporidia and Foraminifera
-
-
Tekle, Y.I.1
Grant, J.2
Cole, J.3
Patterson, D.J.4
Katz, J.5
-
32
-
-
0027968068
-
Clustal-W - improving the sensitivity of progressive multiple sequence alignment through sequenceweighting, position- specific gap penalties and weight matrix choice
-
Thompson JD, Higgins DG, Gibson TJ. 1994. Clustal-W - improving the sensitivity of progressive multiple sequence alignment through sequenceweighting, position- specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:4673-4680.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
33
-
-
85158020247
-
Genome-wide rearrangements of DNA in ciliates
-
Craig NL, Craigie R, Gellert M, Lambowitz A, editors, Washington DC, ASM Press. p
-
Yao MC, Duharcourt S, Chalker DL. 2002. Genome-wide rearrangements of DNA in ciliates. In: Craig NL, Craigie R, Gellert M, Lambowitz A, editors. Mobile DNA II. Washington (DC): ASM Press. p. 730-758.
-
(2002)
Mobile DNA II
, pp. 730-758
-
-
Yao, M.C.1
Duharcourt, S.2
Chalker, D.L.3
-
34
-
-
0038581529
-
Programmed DNA deletion as an RNA-guided systemof genomedefense
-
Yao MC, Fuller P, Xi X. 2003. Programmed DNA deletion as an RNA-guided systemof genomedefense. Science. 300:1581-1584.
-
(2003)
Science
, vol.300
, pp. 1581-1584
-
-
Yao, M.C.1
Fuller, P.2
Xi, X.3
-
35
-
-
34249947980
-
Micronuclear and macronuclear forms of beta-tubulin genes in the ciliate Chilodonella uncinata reveal insights into genome processing and protein evolution
-
Zufall RA, Katz LA. 2007. Micronuclear and macronuclear forms of beta-tubulin genes in the ciliate Chilodonella uncinata reveal insights into genome processing and protein evolution. J Eukaryot Microbiol. 54:275-282.
-
(2007)
J Eukaryot Microbiol
, vol.54
, pp. 275-282
-
-
Zufall, R.A.1
Katz, L.A.2
|