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Volumn 43, Issue 4, 2007, Pages 452-456

TraceHaplotyper: Using direct sequencing to determine the phase of an indel followed by biallelic SNPs

Author keywords

[No Author keywords available]

Indexed keywords

GENETIC ENGINEERING; POLYMORPHISM;

EID: 35649007346     PISSN: 07366205     EISSN: None     Source Type: Journal    
DOI: 10.2144/000112552     Document Type: Article
Times cited : (9)

References (13)
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  • 2
    • 2342462398 scopus 로고    scopus 로고
    • Single-molecule analysis for molecular haplotyping
    • Kwok, P.Y. and M. Xiao. 2004. Single-molecule analysis for molecular haplotyping. Hum. Mutat. 23:442-446.
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  • 4
    • 33747401249 scopus 로고    scopus 로고
    • Phase determination from direct sequencing of length-variable DNA regions
    • Flot, J.F., A. Tillier, S. Samadi, and S. Tillier. 2006. Phase determination from direct sequencing of length-variable DNA regions. Mol. Ecol. Notes 6:627-630.
    • (2006) Mol. Ecol. Notes , vol.6 , pp. 627-630
    • Flot, J.F.1    Tillier, A.2    Samadi, S.3    Tillier, S.4
  • 5
    • 0031955518 scopus 로고    scopus 로고
    • Base-calling of automated sequencer traces using phred. I. Accuracy assessment
    • Ewing, B., L. Hillier, M.C. Wendl, and P. Green. 1998. Base-calling of automated sequencer traces using phred. I. Accuracy assessment. Genome Res. 8:175-185.
    • (1998) Genome Res , vol.8 , pp. 175-185
    • Ewing, B.1    Hillier, L.2    Wendl, M.C.3    Green, P.4
  • 6
    • 7044235857 scopus 로고    scopus 로고
    • Microsatellite null alleles in parentage analysis
    • Dakin, E.E. and J.C. Avise. 2004. Microsatellite null alleles in parentage analysis. Heredity 93:504-509.
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    • Dakin, E.E.1    Avise, J.C.2
  • 8
    • 0036010772 scopus 로고    scopus 로고
    • rd, S.V. Tingey, and A. Rafalski. 2002. Insertion-deletion polymorphisms in 3′ regions of maize genes occur frequently and can be used as highly informative genetic markers. Plant Mol. Biol. 48:539-547.
    • rd, S.V. Tingey, and A. Rafalski. 2002. Insertion-deletion polymorphisms in 3′ regions of maize genes occur frequently and can be used as highly informative genetic markers. Plant Mol. Biol. 48:539-547.
  • 10
    • 0036678354 scopus 로고    scopus 로고
    • ShiftDetector: Detection of shift mutations
    • Seroussi, E., M. Ron, and D. Kedra. 2002. ShiftDetector: detection of shift mutations. Bioinformatics 18:1137-1138.
    • (2002) Bioinformatics , vol.18 , pp. 1137-1138
    • Seroussi, E.1    Ron, M.2    Kedra, D.3
  • 11
    • 34248170222 scopus 로고    scopus 로고
    • PolyScan: An automatic indel and SNP detection approach to the analysis of human resequencing data
    • Chen, K., M.D. McLellan, L. Ding, M.C. Wendl, Y. Kasai, R.K. Wilson, and E.R. Mardis. 2007. PolyScan: An automatic indel and SNP detection approach to the analysis of human resequencing data. Genome Res. 17:659-666.
    • (2007) Genome Res , vol.17 , pp. 659-666
    • Chen, K.1    McLellan, M.D.2    Ding, L.3    Wendl, M.C.4    Kasai, Y.5    Wilson, R.K.6    Mardis, E.R.7
  • 12
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    • A tale of two templates: Automatically resolving double traces has many applications, including efficient PCR-based elucidation of alternative splices
    • Tenney, A.E., J.Q. Wu, L. Langton, P. Klueh, R. Quatrano, and M.R. Brent. 2007. A tale of two templates: automatically resolving double traces has many applications, including efficient PCR-based elucidation of alternative splices. Genome Res. 17:212-218.
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    • Flot, J.F. CHAMPURU1.0: A computer software for unraveling mixtures of two DNA sequences of unequal lengths. Mol. Ecol. Notes, In press
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* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.