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Volumn 2812, Issue , 2003, Pages 190-201

New efficient algorithm for detection of horizontal gene transfer events

Author keywords

[No Author keywords available]

Indexed keywords

BIOLOGY; GENE TRANSFER;

EID: 35248900589     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/978-3-540-39763-2_15     Document Type: Article
Times cited : (23)

References (23)
  • 1
    • 0031716190 scopus 로고    scopus 로고
    • Rapid evaluation of least-squares and minimum evolution criteria on phylogenetic trees
    • Bryant, D., and P. Waddell.: Rapid evaluation of least-squares and minimum evolution criteria on phylogenetic trees. Mol. Biol. Evol. 15 (1998) 1346-1359
    • (1998) Mol. Biol. Evol. , vol.15 , pp. 1346-1359
    • Bryant, D.1    Waddell, P.2
  • 2
    • 0001925593 scopus 로고
    • A note on metric properties of trees
    • Buneman, P.: A note on metric properties of trees. Jl Comb. Theory B. 17 (1974) 48-50
    • (1974) Jl Comb. Theory B , vol.17 , pp. 48-50
    • Buneman, P.1
  • 3
    • 0031811061 scopus 로고    scopus 로고
    • Jungle: A new solution to the host/parasite phylogeny reconciliation problem
    • Charleston, M. A.: Jungle: a new solution to the host/parasite phylogeny reconciliation problem. Math. Biosci. 149 (1998) 191-223
    • (1998) Math. Biosci. , vol.149 , pp. 191-223
    • Charleston, M.A.1
  • 5
    • 0029897169 scopus 로고    scopus 로고
    • Rampant horizontal transfer and duplication of Rubisco genes in Eubacteria and Plastids
    • Delwiche, C.F. and Palmer, J.D.: Rampant horizontal transfer and duplication of Rubisco genes in Eubacteria and Plastids. Mol. Biol. Evol. 13(6) (1996) 873-882
    • (1996) Mol. Biol. Evol. , vol.13 , Issue.6 , pp. 873-882
    • Delwiche, C.F.1    Palmer, J.D.2
  • 6
    • 0033603539 scopus 로고    scopus 로고
    • Phylogenetic classification and the universal tree
    • Doolittle, W. F.: Phylogenetic classification and the universal tree. Science 284 (1999) 2124-2128
    • (1999) Science , vol.284 , pp. 2124-2128
    • Doolittle, W.F.1
  • 7
    • 0031084471 scopus 로고    scopus 로고
    • An alternating least-squares approach to inferring phylogenies from pairwise distances
    • Felsenstein, J.: An alternating least-squares approach to inferring phylogenies from pairwise distances. Syst. Biol. 46 (1997) 101-111
    • (1997) Syst. Biol. , vol.46 , pp. 101-111
    • Felsenstein, J.1
  • 8
    • 0030807655 scopus 로고    scopus 로고
    • BIONJ: An improved version of the NJ algorithm based on a simple model of sequence data
    • Gascuel O.: BIONJ: an improved version of the NJ algorithm based on a simple model of sequence data, Mol. Biol. Evol. 14(7) (1997) 685-695
    • (1997) Mol. Biol. Evol. , vol.14 , Issue.7 , pp. 685-695
    • Gascuel, O.1
  • 9
    • 0030253222 scopus 로고    scopus 로고
    • Reconstruction of ancient molecular phylogenies
    • 2
    • Guig, R. I. Muchnik, and T.F. Smith.: Reconstruction of ancient molecular phylogenies. Mol. Phyl. Evol. 6,2 (1996) 189-213
    • (1996) Mol. Phyl. Evol. , vol.6 , pp. 189-213
    • Guig, R.I.M.1    Smith, T.F.2
  • 10
    • 0034826882 scopus 로고    scopus 로고
    • Efficient algorithms for lateral gene transfer problems
    • Hallet, M., and Lagergreen, J.: Efficient algorithms for lateral gene transfer problems. RECOMB (2001) 149-156
    • (2001) RECOMB , pp. 149-156
    • Hallet, M.1    Lagergreen, J.2
  • 11
    • 0025299784 scopus 로고
    • A heuristic method to reconstructing the evolution of sequences subject to recombination using parsimony
    • Hein, J.: A heuristic method to reconstructing the evolution of sequences subject to recombination using parsimony. Math. Biosci. (1990) 185-200
    • (1990) Math. Biosci. , pp. 185-200
    • Hein, J.1
  • 12
    • 21844486148 scopus 로고
    • On the complexity of comparing evolutionnary treees
    • Combinatorial Pattern Matching (CPM)95
    • Hein. J., Jiang, T., Wang, L. and Zhang, K.: On the complexity of comparing evolutionnary treees. Combinatorial Pattern Matching (CPM)95, LLNCS 937 (1995) 177-190
    • (1995) LLNCS , vol.937 , pp. 177-190
    • Hein, J.1    Jiang, T.2    Wang, L.3    Zhang, K.4
  • 13
    • 0002291589 scopus 로고    scopus 로고
    • On the complexity of comparing evolutionnary trees
    • Hein, J., Jiang, T., Wang, L. and Zhang, K.: On the complexity of comparing evolutionnary trees. Discr. Appl. Math. 71 (1996) 153-169
    • (1996) Discr. Appl. Math. , vol.71 , pp. 153-169
    • Hein, J.1    Jiang, T.2    Wang, L.3    Zhang, K.4
  • 15
    • 0033243629 scopus 로고    scopus 로고
    • An algorithm for the fitting of a phylogenetic tree according to a weighted least-squares criterion
    • 1
    • Makarenkov, V. and Leclerc, B.: An algorithm for the fitting of a phylogenetic tree according to a weighted least-squares criterion, J. of Classif. 16,1 (1999) 3-26
    • (1999) J. of Classif. , vol.16 , pp. 3-26
    • Makarenkov, V.1    Leclerc, B.2
  • 16
    • 0034894308 scopus 로고    scopus 로고
    • T-Rex: Reconstructing and visualizing phylogenetic trees and reticulation networks
    • Makarenkov, V.: T-Rex: reconstructing and visualizing phylogenetic trees and reticulation networks. Bioinformatics, 17 (2001) 664-668
    • (2001) Bioinformatics , vol.17 , pp. 664-668
    • Makarenkov, V.1
  • 17
    • 0031587820 scopus 로고    scopus 로고
    • Archael genomics an overview
    • Olsen, G. J. and Woese, C. R.: Archael genomics an overview. Cell 89 (1997) 991-994
    • (1997) Cell , vol.89 , pp. 991-994
    • Olsen, G.J.1    Woese, C.R.2
  • 18
    • 12044253257 scopus 로고
    • Maps between trees and cladistic analysis of historical associations among genes, organism and areas
    • Page, R. D. M.: Maps between trees and cladistic analysis of historical associations among genes, organism and areas. Syst. Biol. 43 (1994) 58-77
    • (1994) Syst. Biol. , vol.43 , pp. 58-77
    • Page, R.D.M.1
  • 19
    • 0031774059 scopus 로고    scopus 로고
    • From gene to organismal phylogeny: Reconciled trees
    • Page, R. D. M. and Charleston, M. A.: From gene to organismal phylogeny: Reconciled trees. Bioinformatics 14 (1998) 819-820
    • (1998) Bioinformatics , vol.14 , pp. 819-820
    • Page, R.D.M.1    Charleston, M.A.2
  • 20
    • 0023375195 scopus 로고
    • The neighbour-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N. and Nei, M.: The neighbour-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4 (1987) 406-425
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 21
    • 0034340216 scopus 로고    scopus 로고
    • Reticulate evolution in bacteria and other organisms: How can we study it?
    • Sneath, P. H.: Reticulate evolution in bacteria and other organisms: How can we study it? J. Classif. 17 (2000) 159-163
    • (2000) J. Classif. , vol.17 , pp. 159-163
    • Sneath, P.H.1
  • 22
    • 4644372301 scopus 로고    scopus 로고
    • Bethesda (MD): National Library of Medicine (US), National Center for Biotechnology Information; Oct. Chapter 17, The Reference Sequence (RefSeq) Project
    • The NCBI handbook [Internet]. Bethesda (MD): National Library of Medicine (US), National Center for Biotechnology Information; 2002 Oct. Chapter 17, The Reference Sequence (RefSeq) Project
    • (2002) The NCBI Handbook [Internet]
  • 23
    • 0027229438 scopus 로고
    • Network models for sequence evolution
    • von Haseler, A. and Churchill, G. A.: Network models for sequence evolution. J. Mol. Evol. 37 (1993) 77-85
    • (1993) J. Mol. Evol. , vol.37 , pp. 77-85
    • Von Haseler, A.1    Churchill, G.A.2


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