Quantitative measurements of vancomycin binding to self-assembled peptide monolayers on chips by quartz crystal microbalance

Analytical Biochemistry

Volumn 371, Issue 1, 2007, Pages 1-9

  Tseng, Ming Chung ^a   Chang, Yi Pin ^a   Chu, Yen Ho ^a  

^a NATIONAL CHUNG CHENG UNIVERSITY   (Taiwan)

Author keywords

Binding; Peptides; Quartz crystal microbalance; Vancomycin

Indexed keywords

CRYSTALS; DISSOCIATION; PEPTIDES; QUARTZ; QUARTZ CRYSTAL MICROBALANCES; SELF ASSEMBLED MONOLAYERS; SURFACE PLASMON RESONANCE;

BINDING; DISSOCIATION CONSTANT; MOLECULAR RECOGNITION ELEMENT; ORGANIC CHEMISTRY; QUANTITATIVE BINDING; QUANTITATIVE MEASUREMENT; SELF-ASSEMBLED PEPTIDES; VANCOMYCIN;

LIGANDS;

ALANINE; DECANOIC ACID DERIVATIVE; N,N DIMETHYLFORMAMIDE; SILICON DIOXIDE; SUCCINIMIDYL 16 TRITYLNERCAPTOHEXADECANOATE; UNCLASSIFIED DRUG; VANCOMYCIN;

ACYLATION; ARTICLE; BACTERIAL CELL; BACTERIAL CELL WALL; BINDING AFFINITY; BIOSYNTHESIS; CHEMICAL REACTION; COLUMN CHROMATOGRAPHY; CONTROLLED STUDY; CRYSTAL; DRUG BINDING; DRUG INHIBITION; LIGAND BINDING; MOLECULAR RECOGNITION; NONHUMAN; ORGANIC CHEMISTRY; PIEZOELECTRICITY; PRIORITY JOURNAL; PROTEIN ASSEMBLY; PROTEIN SYNTHESIS; QUANTITATIVE ANALYSIS; SURFACE PLASMON RESONANCE; SYNTHESIS;

EID: 35148818645     PISSN: 00032697     EISSN: 10960309     Source Type: Journal    
DOI: 10.1016/j.ab.2007.08.035     Document Type: Article

References (34)

1. Urner A.P.F., Karube I., and Wilson G.S. Biosensor Fundamentals and Applications (1987), Oxford Science Publ cations, Oxford
2. Sauerbrey G. Use a quartz vibrator form weight thin films on a microbalance. Z. Phys. 155 (1959) 206-210
3. Guilbault G.G. Determination of formaldehyde with an enzyme-coated piezoelectric crystal detector. Anal. Chem. 55 (1983) 1682-1684
4. Buttry D.A., and Ward D.M. In situ interfacial mass detection with piezoelectric transducers. Science 249 (1990) 1000-1007
5. Marx K.A. Quartz crystal microbalance; a useful tool for studying thin polymer films and complex biomolecular systems at the solution-surface interface. Biomacromolecules 4 (2003) 1099-1120
6. Ebara Y., and Okahata Y. A Kinetic Study of concanavalin A binding to glycolipid monolayers by using a quartz-crystal microbalance. J. Am. Chem. Soc. 116 (1994) 11209-11212
7. Nishino H., Nihira T., Mori T., and Okahata Y. Direct monitoring of enzymatic glucan hydrolysis on a 27-MHz quartz-crystal microbalance. J. Am. Chem. Soc. 126 (2004) 2264-2265
8. Pei Z., Anderson H., Aastrup T., and Ramström O. Study of real-time lectin-carbohydrate interactions on the surface of a quartz crystal microbalance. Biosens. Bioelectron. 21 (2005) 60-66
9. Decker J., Weinberger K., Prohaska E., Hauck S., Köβlinger C., Wolf H., and Hengerer A. Characterization of a human pancreatic secretory trypsin inhibitor mutant binding to Legionella pneumophila as determined by a quartz crystal microbalance. J. Immunol. Methods 233 (2000) 159-165
10. Lau O.-W., Shao B., and Lee M.T.W. Affinity mass sensor: determination of fructose. Anal. Chim. Acta 403 (2000) 49-56
11. Liu Y., Yu X., Zhao R., Shangguan D.-H., Bo Z.Y., and Liu G.Q. Real-time kinetic analysis of the interaction between immunoglobulin G and histidine using quartz crystal microbalance biosensor in solution. Biosens. Bioelectron. 18 (2003) 1419-1427
12. Perkins H.R. Specificity of combination between mucopeptide precursors and vancomycin or ristocetin. Biochem. J 111 (1969) 195-205
13. Barna J.C.J., and Williamson M.L. Structural features that affect the binding of teicoplanin, ristocetin A, and their derivatives to the bacterial cell wall model N-acetyl-d-alanyl-d-alanine. J. Chem. Soc. Chem. Commun. (1985) 254-256
14. Chu Y.-H., Avila L.Z., Gao J., and Whiteside G.M. Affinity capillary electrophoresis. Acc. Chem. Res. 28 (1995) 461-468
15. Gao J., Gomez F.A., Haerter R., and Whitesides G.M. Determination of formaldehyde with an enzyme-coated piezoelectric crystal detector. Proc. Natl. Acad. Sci. USA. 91 (1994) 12027-12030
16. Rao J., Colton I.J., and Whitesides G.M. Using capillary electrophoresis to study the electrostatic interactions involved in association of D -Ala-D-Ala with vancomycin. J. Am. Soc. Chem. 119 (1997) 9336-9340
17. Williams D.H., Williamson M.P., Butche D.W., and Hammond S.J. Detailed binding sites of the antibiotics vancomycin and ristocetin A: determination of intermolecular distances in antibiotic/substrate complexes by use of the time-dependent NOE. J. Am. Chem. Soc. 105 (1983) 1332-1339
18. Prowse W.G., Kline A.D., Skelton M.A., and Loncharich R.J. Conformation of A82846B, a glycopeptide antibiotic, complexed with its cell wall fragment: an asymmetric homodimer determined using NMR spectroscopy. Biochemistry 34 (1995) 9632-9744
19. D-Ala complex using NMR parameters and molecular modeling. J. Am. Chem. Soc. 108 (1986) 3165-3170
20. Mackay J.P., Gerhard U., Beaurgard D.A., Westwell M.S., Searle M.S., and Williams D.H. Glycopeptide antibiotic activity and the possible role of dimerization: a model for biological signaling. J. Am. Chem. Soc. 116 (1994) 4581-4590
21. Molinari H., Pastore A., Lian L., Hawkes G.E., and Sales K. Structure of vancomycin and a vancomycin/d-Ala-d-Ala complex in solution. Biochemistry 29 (1986) 2271-2277
22. Rao J., Yan L., Xu B., and Whitesides G.M. Using SPR to study the binding of vancomycin and its dimer to self-assembled monolayers presenting d-Ala-d-Ala. J. Am. Chem. Soc. 121 (1999) 2629-2630
23. Cooper M.A., and Williams D.H. Binding of glycopeptide antibiotics to a model of a vancomycin-resistant bacterium. Chem. Biol. 6 (1999) 891-899
24. Tseng M.-C., and Chu Y.-H. Using surface plasmon resonance to directly identify moleculesin a tripeptide library that bind tightly to a vancomycin chip. Analytical Biochemistry 336 (2005) 172-177
25. Bain C.D., Troughtoyt E.B., Tao Y.T., Evall J., Whitesides G.M., and Nuzzoj R.G. Formation of monolayer films by the spontaneous assembly of organic thiols from solution onto gold. J. Am. Chem. Soc. 111 (1989) 321-335
26. Porter M.D., Bright T.B., Allara D.L., and Chidsey C.E.D. Spontaneously organized molecular assemblies. 4. Structural characterization of n-alkyl thiol monolayers on gold by optical ellipsometry, infrared spectroscopy, and electrochemistry. J. Am. Chem. Soc. 109 (1987) 3559-3568
27. Deng L., Mrksich M., and Whitesides G.M. Self-assembled monolayers of alkanethiolates presenting tri(propylene sulfoxide) groups resist the adsorption of protein. J. Am. Chem. Soc. 118 (1996) 5136-5137
28. Chapman R.G., Ostuni E., Yan L., and Whitesides G.M. Preparation of mixed self-assembled monolayers (SAMs) that resist adsorption of proteins using the reaction of amines with a SAM that presents interchain carboxylic anhydride groups. Langmuir 16 (2000) 6927-6936
29. Prime K.L., and Whitesides G.M. Self-assembled organic monolayers: model systems for studying adsorption of proteins at surfaces. Science 252 (1991) 1164-1167
30. Prime K.L., and Whitesides G.M. Adsorption of proteins onto surfaces containing end-attached oligo(ethylene oxide): a model system using self-assembled monolayers. J. Am. Chem. Soc. 115 (1995) 10714-10721
31. Mrksich M., Sigal G.B., and Whitesides G.M. Surface plasmon resonance permits in situ measurement of protein adsorption on self-assembled monolayers of alkanethiolates on gold. Langmuir 11 (1995) 4383-4385
32. Tseng M.-C., Chang I.-N., and Chu Y.-H. Quartz-Crystal Microbalance in Biomolecular Recognition. In: Yan B. (Ed). Chemical Analysis: A Series of Monographs on Analytical Chemistry and Its Applications (2003), John Wiley & Sons Inc 351-368 Chapter 14
33. Kanazawa K.K., and Gordon II J.G. Frequency of a quartz microbalance in contact with liquid. Anal. Chem. 57 (1985) 1770-1771
34. Karlsson R. SPR for molecular interaction analysis: a review of emerging application areas. J. Mol. Recognit. 17 (2004) 151-161