Induction of DAN/TIR yeast cell wall mannoprotein genes in response to high hydrostatic pressure and low temperature

FEBS Letters

Volumn 581, Issue 25, 2007, Pages 4993-4998

  Abe, Fumiyoshi ^a  

^a JAPAN AGENCY FOR MARINE EARTH SCIENCE AND TECHNOLOGY   (Japan)

Author keywords

DAN TIR genes; DNA microarray; High hydrostatic pressure; Hypoxia; Low temperature; Saccharomyces cerevisiae

Indexed keywords

DAN/TIR PROTEIN; ENZYME; MANNOPROTEIN; UNCLASSIFIED DRUG; ZYMOLYASE;

ARTICLE; CELL WALL; CONTROLLED STUDY; DOWN REGULATION; GENE CONTROL; GENE EXPRESSION; GENETIC TRANSCRIPTION; HYDROSTATIC PRESSURE; HYPOXIA; LOW TEMPERATURE; NONHUMAN; POLYACRYLAMIDE GEL ELECTROPHORESIS; PRIORITY JOURNAL; PROTEIN INDUCTION; SACCHAROMYCES CEREVISIAE; UPREGULATION; YEAST CELL;

CELL WALL; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION, FUNGAL; HYDROLASES; HYDROSTATIC PRESSURE; MEMBRANE GLYCOPROTEINS; SACCHAROMYCES CEREVISIAE; SACCHAROMYCES CEREVISIAE PROTEINS; SODIUM DODECYL SULFATE; TEMPERATURE; UP-REGULATION;

SACCHAROMYCES CEREVISIAE;

EID: 34948902853     PISSN: 00145793     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.febslet.2007.09.039     Document Type: Article

References (25)

1. Abe F., and Horikoshi K. Tryptophan permease gene TAT2 confers high-pressure growth in Saccharomyces cerevisiae. Mol. Cell. Biol. 20 (2000) 8093-8102
2. Abe F., and Iida H. Pressure-induced differential regulation of the two tryptophan permeases Tat1 and Tat2 by ubiquitin ligase Rsp5 and its binding proteins, Bul1 and Bul2. Mol. Cell. Biol. 23 (2003) 7566-7584
3. Nagayama A., Kato C., and Abe F. The N- and C-terminal mutations in tryptophan permease Tat2 confer cell growth in Saccharomyces cerevisiae under high-pressure and low-temperature conditions. Extremophiles 8 (2004) 143-149
4. Miura T., and Abe F. Multiple ubiquitin-specific protease genes are involved in degradation of yeast tryptophan permease Tat2 at high pressure. FEMS Microbiol. Lett. 239 (2004) 171-179
5. Iwahashi H., Shimizu H., Odani M., and Komatsu Y. Piezophysiology of genome wide gene expression levels in the yeast Saccharomyces cerevisiae. Extremophiles 7 (2003) 291-298
6. Fernandes P.M., Domitrovic T., Kao C.M., and Kurtenbach E. Genomic expression pattern in Saccharomyces cerevisiae cells in response to high hydrostatic pressure. FEBS Lett. 556 (2004) 153-160
7. Kwast K.E., Lai L.C., Menda N., James III D.T., Aref S., and Burke P.V. Genomic analyses of anaerobically induced genes in Saccharomyces cerevisiae: functional roles of Roxl and other factors in mediating the anoxic response. J. Bacteriol. 184 (2002) 250-265
8. Sertil O., Cohen B.D., Davies K.J., and Lowry C.V. The DAN1 gene of S. cerevisiae is regulated in parallel with the hypoxic genes, but by a different mechanism. Gene 192 (1997) 199-205
9. ter Linde J.J., Liang H., Davis R.W., Steensma H.Y., van Dijken J.P., and Pronk J.T. Genome-wide transcriptional analysis of aerobic and anaerobic chemostat cultures of Saccharomyces cerevisiae. J. Bacteriol. 181 (1999) 7409-7413
10. Donzeau M., Bourdineaud J.P., and Lauquin G.J. Regulation by low temperatures and anaerobiosis of a yeast gene specifying a putative GPI-anchored plasma membrane protein. Mol. Microbiol. 20 (1996) 449-459
11. Abramova N., Sertil O., Mehta S., and Lowry C.V. Reciprocal regulation of anaerobic and aerobic cell wall mannoprotein gene expression in Saccharomyces cerevisiae. J. Bacteriol. 183 (2001) 2881-2887
12. Abramova N.E., Cohen B.D., Sertil O., Kapoor R., Davies K.J., and Lowry C.V. Regulatory mechanisms controlling expression of the DAN/TIR mannoprotein genes during anaerobic remodeling of the cell wall in Saccharomyces cerevisiae. Genetics 157 (2001) 1169-1177
13. Miura T., Minegishi H., Usami R., and Abe F. Systematic analysis of HSP gene expression and effects on cell growth and survival at high hydrostatic pressure in Saccharomyces cerevisiae. Extremophiles 10 (2006) 279-284
14. Kohrer K., and Domdey H. Preparation of high molecular weight RNA. Meth. Enzymol. 194 (1991) 398-405
15. Iwahashi H., Odani M., Ishidou E., and Kitagawa E. Adaptation of Saccharomyces cerevisiae to high hydrostatic pressure causing growth inhibition. FEBS Lett. 579 (2005) 2847-2852
16. Sahara T., Goda T., and Ohgiya S. Comprehensive expression analysis of time-dependent genetic responses in yeast cells to low temperature. J. Biol. Chem. 277 (2002) 50015-50021
17. Schade B., Jansen G., Whiteway M., Entian K.D., and Thomas D.Y. Cold adaptation in budding yeast. Mol. Biol. Cell 15 (2004) 5492-5502
18. Abe F. Piezophysiology of yeast: occurrence and significance. Cell. Mol. Biol. 50 (2004) 437-445
19. Domitrovic T., Fernandes C.M., Boy-Marcotte E., and Kurtenbach E. High hydrostatic pressure activates gene expression through Msn2/4 stress transcription factors which are involved in the acquired tolerance by mild pressure precondition in Saccharomyces cerevisiae. FEBS Lett. 580 (2006) 6033-6038
20. Ichimori H., Hata T., Matsuki H., and Kaneshina S. Barotropic phase transitions and pressure-induced interdigitation on bilayer membranes of phospholipids with varying acyl chain lengths. Biochim. Biophys. Acta 1414 (1998) 165-174
21. Cossins A.R., and Macdonald A.G. The adaptation of biological membranes to temperature and pressure: fish from the deep and cold. J. Bioenerg. Biomembr. 21 (1989) 115-135
22. Behan M.K., Macdonald A.G., Jones G.R., and Cossins A.R. Homeoviscous adaptation under pressure: the pressure dependence of membrane order in brain myelin membranes of deep-sea fish. Biochim. Biophys. Acta 1103 (1992) 317-323
23. Cohen B.D., Sertil O., Abramova N.E., Davies K.J., and Lowry C.V. Induction and repression of DAN1 and the family of anaerobic mannoprotein genes in Saccharomyces cerevisiae occurs through a complex array of regulatory sites. Nucleic Acids Res. 29 (2001) 799-808
24. Davies B.S., Wang H.S., and Rine J. Dual activators of the sterol biosynthetic pathway of Saccharomyces cerevisiae: similar activation/regulatory domains but different response mechanisms. Mol. Cell. Biol. 25 (2005) 7375-7385
25. Kwast K.E., Burke P.V., Staahl B.T., and Poyton R.O. Oxygen sensing in yeast: evidence for the involvement of the respiratory chain in regulating the transcription of a subset of hypoxic genes. Proc. Natl. Acad. Sci. USA 96 (1999) 5446-5451