Bacillus chagannorensis sp. nov., a moderate halophile from a soda lake in inner Mongolia, China

International Journal of Systematic and Evolutionary Microbiology

Volumn 57, Issue 9, 2007, Pages 2084-2088

  Carrasco, I J ^a   Marquez M C ^a   Xue, Y ^b   Ma, Y ^b   Cowan, D A ^c   Jones, B E ^d   Grant, W D ^e   Ventosa, Antonio ^a  

^a UNIVERSITY OF SEVILLE   (Spain)

^b INSTITUTE OF MICROBIOLOGY   (China)

^c UNIVERSITY OF THE WESTERN CAPE   (South Africa)

^d Genencor International BV   (Netherlands)

^e UNIVERSITY OF LEICESTER   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

BACITRACIN; BACTERIAL DNA; CARDIOLIPIN; CEFALOTIN; CYTOSINE; DIAMINO ACID; DIAMINOPIMELIC ACID; FATTY ACID; GUANINE; KANAMYCIN; MENAQUINONE; NALIDIXIC ACID; PENICILLIN G; PEPTIDOGLYCAN; PHOSPHATIDYLETHANOLAMINE; PHOSPHATIDYLGLYCEROL; PHOSPHOLIPID; QUINONE DERIVATIVE; RNA 16S; SODIUM CHLORIDE; STREPTOMYCIN; TETRACYCLINE; VANCOMYCIN;

AMINO ACID COMPOSITION; ANAEROBIC BACTERIUM; ANIMAL CELL; ANTIBIOTIC RESISTANCE; ANTIBIOTIC SENSITIVITY; ARTICLE; BACILLUS; BACILLUS CHAGANNORENSIS; BACTERIAL CELL; BACTERIAL ENDOSPORE; BACTERIAL GROWTH; BACTERIAL SPORE; BACTERIUM ISOLATION; CELL MOTILITY; CELL SHAPE; CHINA; CONTROLLED STUDY; DNA CONTENT; FIRMICUTES; GENUS; GRAM POSITIVE BACTERIUM; HALOPHILE; LAKE; LIPID COMPOSITION; MONGOLIA; NONHUMAN; NUCLEOTIDE SEQUENCE; PH; PHYLOGENY; PHYLUM; PRIORITY JOURNAL; SALINITY; SEQUENCE ANALYSIS; SPECIES IDENTIFICATION; STRAIN IDENTIFICATION;

ANAEROBIOSIS; BACILLUS; BACTERIAL TYPING TECHNIQUES; BASE COMPOSITION; CHINA; DIAMINOPIMELIC ACID; DNA, BACTERIAL; DNA, RIBOSOMAL; FATTY ACIDS; GENES, RRNA; HYDROGEN-ION CONCENTRATION; LOCOMOTION; MOLECULAR SEQUENCE DATA; PEPTIDOGLYCAN; PHOSPHOLIPIDS; PHYLOGENY; QUINONES; RNA, BACTERIAL; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, NUCLEIC ACID; SPORES, BACTERIAL; TEMPERATURE; WATER MICROBIOLOGY;

BACILLUS (BACTERIUM); BACILLUS SALIPHILUS; BACTERIA (MICROORGANISMS); FIRMICUTES; POSIBACTERIA;

EID: 34848898244     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.65162-0     Document Type: Article

References (31)

1. Albert, R. A., Archambault, J., Rosselló-Mora, R., Tindall, B. J. & Matheny, M. (2005). Bacillus acidicola sp. nov., a novel mesophilic, acidophilic species isolated from acidic Sphagnum peat bogs in Wisconsin. Int J Syst Evol Microbiol 55, 2125-2130.
2. Arahal, D. R. & Ventosa, A. (2002). Moderately halophilic and halotolerant species of Bacillus and related genera. In Applications and Systematics of Bacillus and Relatives, pp. 83-99. Edited by R. Berkeley, M. Heyndrickx, N. Logan & P. De Vos. Oxford: Blackwell.
3. Ash, C., Farrow, J. A. E, Wallbanks, S. & Collins, M. D. (1991). Phylogenetic heterogeneity of the genus Bacillus as revealed by comparative analysis of small-subunit ribosomal-RNA sequences. Lett Appl Microbiol 13, 202-206.
4. Duckworth, A. W., Grant W. D., Jones, B. E. & van Steenbergen, R. (1996). Phylogenetic diversity of soda lake alkaliphiles. FEMS Microbiol Ecol 19, 181-191.
5. Dussault H. P. (1955). An improved technique for staining red halophilic bacteria. J Bacteriol 70, 484-485.
6. Felsenstein, J. (1981). Evolutionary trees from DNA sequences: A maximum likelihood approach. J Mol Evol 17, 368-376.
7. Fitch, W. M. (1971). Toward defining the course of evolution: minimum change for a specific tree topology. Syst Zool 20, 406-416.
8. García, M. T., Ventosa, A., Ruiz-Berraquero, F. & Kocur, M. (1987). Taxonomic study and amended description of Vibrio costicola. Int J Syst Bacteriol 37, 251-256.
9. Gomori, G. (1955). Preparation of buffers for use in enzyme studies. Methods Enzymol 1, 138-146.
10. Heyrman, J., Vanparys, B., Logan, N.A, Balcaen, A, Rodriguez-Diaz, M., Felske, A. & De Vos, P. (2004). Bacillus novalis sp. nov., Bacillus vireti sp. nov., Bacillus soli sp. nov., Bacillus botaviensis sp. nov. and Bacillus drentensis sp. nov., from the Drentse A grasslands. Int J Syst Evol Microbiol 54, 47-57.
11. Heyrman, J., Rodriguez-Diaz, M., Davos, J., Felske, A., Logan, N. A. & De Vos, P. (2005). Bacillus novalis sp. nov., Bacillus arvi sp. nov. and Bacillus humi sp. nov., isolated from soil. Int J Syst Evol Microbiol 55, 111-117.
12. Lim, J.-M., Jeon, C. O. & Kim, C.-J. (2006a). Bacillus taeanensis sp. nov., a halophilic Gram-positive bacterium from a solar saltern in Korea. Int J Syst Evol Microbiol 56, 2903-2908.
13. Lim, J.-M., Jeon, C. O., Lee, J. C., Ju, Y. J., Park, D. J. & Kim, C.-J. (2006b). Bacillus koreensis sp. nov., a spore-forming bacterium, isolated from the rhizosphere of willow roots in Korea. Int J Syst Evol Microbiol 56, 59-63.
14. Lim, J.-M., Jeon, C. O., Lee, S.-M., Xu, L. H., Jiang, C.-L. & Kim, C.-J. (2006c). Bacillus salarius sp. nov., a halophilic, spore-forming bacterium isolated from a salt lake in China. Int J Syst Evol Microbiol 56, 373-377.
15. Ludwig, W., Strunk O., Westram, R., Richter, L., Meier, H., Yadhukumar, Buchner, A., Lai, T., Steppi, S., Jobb, G. & other authors (2004). ARB: A software environment for sequence data. Nucleic Acids Res 32, 1363-1371.
16. Marmur, J. (1961). A procedure for the isolation of deoxyribonucleic acid from microorganisms. J Mol Biol 3, 208-218.
17. Marmur, J. & Doty, P. (1962). Determination of the base composition of deoxyribonucleic acid from its thermal denaturation temperature. J Mol Biol 5, 109-118.
18. Nielsen, P., Fritze, D. & Priest, F. G. (1995). Phenetic diversity of alkaliphitic Bacillus strains: Proposal for nine new species. Microbiology 141, 1745-1761.
19. Owen, R. J. & Hill, L. R. (1979). The estimation of base compositions, base pairing and genome size of bacterial deoxyribonucleic acids. In Identification Methods for Microbiologists, 2nd edn, pp. 217-296. Edited by F. A. Skinner & D. W. Lovelock. London: Academic Press.
20. Priest F. G., Goodfellow, M. & Todd, C. (1988). A numerical classification of the genus Bacillus. J Gen Microbiol 134, 1847-1882.
21. Quesada, E., Ventosa, A., Ruiz-Berraquero, F. & Ramos-Cormenzana, A. (1984). Deleya halophila, a new species of moderately halophilic bacteria. Int J Syst Bacteriol 34, 287-292.
22. Romano, I., Lama, L., Nicolaus, B., Gambacorta, A. & Giordano, A. (2005). Bacillus saliphilus sp. nov., isolated from a mineral pool in Campania, Italy. Int J Syst Evol Microbiol 55, 159-163.
23. Saitou, N. & Nei, M. (1987). The neighbor-joining method: A new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
24. Schlesner, H., Lawson, P. A., Collins, M. D., Weiss, N., Wehmeyer, U., Vöker, H. & Thomm, M. (2001). Filobacillus milensis gen. nov., sp. nov., a new halophilic spore-forming bacterium with Orn-D-Glu-type peptidoglycan. Int J Syst Evol Microbiol 51, 425-431.
25. Spring, S., Ludwig, W., Marquez, M. C., Ventosa, A. & Schleifer, K.-H. (1996). Halobacillus gen. nov., with descriptions of Halobacillus litoralis sp. nov. and Halobacillus trueperi sp. nov., and transfer of Sporosarcina halophila to Halobacillus halophilus comb. nov. Int J Syst Bacteriol 46, 492-496.
26. Stackebrandt, E. & Ebers, J. (2006). Taxonomic parameters revisited: Tarnished gold standards. Microbiol Today 33, 152-155.
27. Stackebrandt, E. & Goebel, B. M. (1994). Taxonomic note: A place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int J Syst Bacteriol 44, 846-849.
28. Stackebrandt, E., Fredericksen, W., Garrity, G. M., Grimont, P. A. D., Kämpfer, P., Maiden, M. C. J., Nesme, X., Rosselló-Mora, R., Swings, J. & other authors (2002). Report of the ad hoc committee for the re-evaluation of the species definition in bacteriology. Int J Syst Evol Microbiol 52, 1043-1047.
29. Ventosa, A., Quesada, E., Rodriguez-Valera, F., Ruiz-Berraquero, F. & Ramos-Cormenzana, A. (1982). Numerical taxonomy of moderately halophilic Gram-negative rods. J Gen Microbiol 128, 1959-1968.
30. Ventosa, A., Nieto, J. J. & Oren, A. (1998). Biology of moderately halophilic aerobic bacteria. Microbiol Mol Biol Rev 62, 504-544.
31. Wieser, M., Worliczek, H., Kämpfer, P. & Busse, H.-J. (2005). Bacillus herbersteinensis sp. nov. Int J Syst Evol Microbiol 55, 2119-2123.